FFCP PHASE1:Hg19::chr15:74228096..74228111,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74228096..74228111,+|id=chr15:74228096..74228111,+|ontology_enrichment_celltype=CL:0000243!1.06e-09!15;CL:0000125!1.06e-09!15;CL:0000030!1.06e-09!15;CL:0000339!1.06e-09!15;CL:0000075!3.12e-09!27;CL:0000133!6.09e-09!59;CL:0000221!2.02e-08!71;CL:0000095!2.36e-08!17;CL:0000123!2.36e-08!17;CL:0000710!2.80e-07!20;CL:0000128!4.96e-07!7;CL:0000126!4.96e-07!7;CL:0000127!4.96e-07!7;CL:0002453!4.96e-07!7|ontology_enrichment_celltype_v019=CL:0000064;1.34e-17;3!CL:0000067;1.34e-17;3!CL:0005012;1.34e-17;3!CL:0002304;1.34e-17;3!CL:0000075;2.32e-12;27!CL:0000710;8.48e-10;20!CL:0000197;2.79e-09;6!CL:0000098;2.79e-09;6!CL:0002167;2.79e-09;6!CL:0002586;5.80e-09;3!CL:0000174;9.81e-09;3!CL:0000077;1.31e-07;19!CL:0002174;1.75e-07;1!CL:0000501;1.75e-07;1!CL:0000149;6.41e-07;4|ontology_enrichment_celltype_v019_2=CL:0000064,1.13e-17,3;CL:0000067,1.13e-17,3;CL:0005012,1.13e-17,3;CL:0002304,1.13e-17,3;CL:0000075,2.09e-12,27;CL:0000710,7.71e-10,20;CL:0000197,2.57e-09,6;CL:0000098,2.57e-09,6;CL:0002167,2.57e-09,6;CL:0000066,4.10e-09,253;CL:0002586,5.69e-09,3;CL:0000174,1.15e-08,3;CL:0000077,1.30e-07,19;CL:0002174,1.75e-07,1;CL:0000501,1.75e-07,1;CL:0000149,6.32e-07,4|ontology_enrichment_development_v019=UBERON:0000358;2.37e-07;1|ontology_enrichment_disease=DOID:3093!8.04e-07!11|ontology_enrichment_disease_v019=DOID:9119;7.29e-07;1!DOID:5662;7.29e-07;1|ontology_enrichment_disease_v019_2=DOID:9119,4.85e-07,1|ontology_enrichment_uberon=UBERON:0000970!1.87e-08!20;UBERON:0007625!3.53e-08!11;UBERON:0002104!6.69e-08!21;UBERON:0000019!1.23e-07!19;UBERON:0000047!1.23e-07!19;UBERON:0004088!1.23e-07!19;UBERON:0003072!1.23e-07!19;UBERON:0003071!1.23e-07!19;UBERON:0004128!1.23e-07!19;UBERON:0000020!6.02e-07!23;UBERON:0000488!8.72e-07!4|ontology_enrichment_uberon_v019=UBERON:0007625;1.87e-18;11!UBERON:0001778;1.34e-17;3!UBERON:0001775;1.34e-17;3!UBERON:0000019;4.03e-14;19!UBERON:0000047;4.03e-14;19!UBERON:0004088;4.03e-14;19!UBERON:0010230;4.03e-14;19!UBERON:0000970;2.26e-13;20!UBERON:0000488;2.43e-13;4!UBERON:0002104;1.08e-12;21!UBERON:0001456;1.08e-12;21!UBERON:0000020;1.64e-11;23!UBERON:0000966;2.46e-11;5!UBERON:0005388;2.46e-11;5!UBERON:0001802;2.46e-11;5!UBERON:0001032;5.38e-11;24!UBERON:0004456;5.38e-11;24!UBERON:0002203;4.64e-09;6!UBERON:0001768;4.64e-09;6!UBERON:0002200;4.64e-09;6!UBERON:0001781;5.80e-09;3!UBERON:0001782;5.80e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.76e-18,11;UBERON:0001778,1.13e-17,3;UBERON:0001775,1.13e-17,3;UBERON:0000019,2.14e-13,20;UBERON:0000047,2.14e-13,20;UBERON:0010312,2.14e-13,20;UBERON:0004088,2.14e-13,20;UBERON:0010230,2.14e-13,20;UBERON:0003072,2.14e-13,20;UBERON:0004128,2.14e-13,20;UBERON:0003071,2.14e-13,20;UBERON:0000488,2.14e-13,4;UBERON:0000970,1.02e-12,21;UBERON:0002104,1.02e-12,21;UBERON:0001456,4.25e-12,22;UBERON:0000020,5.14e-11,24;UBERON:0001032,5.14e-11,24;UBERON:0004456,5.14e-11,24;UBERON:0000966,1.53e-09,6;UBERON:0005388,1.53e-09,6;UBERON:0001802,1.53e-09,6;UBERON:0002203,4.27e-09,6;UBERON:0001768,4.27e-09,6;UBERON:0002200,4.27e-09,6;UBERON:0001782,5.69e-09,3;UBERON:0005424,5.69e-09,3;UBERON:0005085,2.51e-08,31;UBERON:0001781,6.32e-07,4|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.51255707462509,3.76939975686359,1.84453049955565,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,2.46558257895225,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,2.67643483195743,1.73472656537328,6.2084949946138,0.902838299183157,4.5481500811197,1.03473071292505,0,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.4511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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74228096..74228111,+ | |||
|id=chr15:74228096..74228111,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.06e-09!15;CL:0000125!1.06e-09!15;CL:0000030!1.06e-09!15;CL:0000339!1.06e-09!15;CL:0000075!3.12e-09!27;CL:0000133!6.09e-09!59;CL:0000221!2.02e-08!71;CL:0000095!2.36e-08!17;CL:0000123!2.36e-08!17;CL:0000710!2.80e-07!20;CL:0000128!4.96e-07!7;CL:0000126!4.96e-07!7;CL:0000127!4.96e-07!7;CL:0002453!4.96e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.34e-17;3!CL:0000067;1.34e-17;3!CL:0005012;1.34e-17;3!CL:0002304;1.34e-17;3!CL:0000075;2.32e-12;27!CL:0000710;8.48e-10;20!CL:0000197;2.79e-09;6!CL:0000098;2.79e-09;6!CL:0002167;2.79e-09;6!CL:0002586;5.80e-09;3!CL:0000174;9.81e-09;3!CL:0000077;1.31e-07;19!CL:0002174;1.75e-07;1!CL:0000501;1.75e-07;1!CL:0000149;6.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.13e-17,3;CL:0000067,1.13e-17,3;CL:0005012,1.13e-17,3;CL:0002304,1.13e-17,3;CL:0000075,2.09e-12,27;CL:0000710,7.71e-10,20;CL:0000197,2.57e-09,6;CL:0000098,2.57e-09,6;CL:0002167,2.57e-09,6;CL:0000066,4.10e-09,253;CL:0002586,5.69e-09,3;CL:0000174,1.15e-08,3;CL:0000077,1.30e-07,19;CL:0002174,1.75e-07,1;CL:0000501,1.75e-07,1;CL:0000149,6.32e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.37e-07;1 | |||
|ontology_enrichment_disease=DOID:3093!8.04e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:9119;7.29e-07;1!DOID:5662;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000970!1.87e-08!20;UBERON:0007625!3.53e-08!11;UBERON:0002104!6.69e-08!21;UBERON:0000019!1.23e-07!19;UBERON:0000047!1.23e-07!19;UBERON:0004088!1.23e-07!19;UBERON:0003072!1.23e-07!19;UBERON:0003071!1.23e-07!19;UBERON:0004128!1.23e-07!19;UBERON:0000020!6.02e-07!23;UBERON:0000488!8.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.87e-18;11!UBERON:0001778;1.34e-17;3!UBERON:0001775;1.34e-17;3!UBERON:0000019;4.03e-14;19!UBERON:0000047;4.03e-14;19!UBERON:0004088;4.03e-14;19!UBERON:0010230;4.03e-14;19!UBERON:0000970;2.26e-13;20!UBERON:0000488;2.43e-13;4!UBERON:0002104;1.08e-12;21!UBERON:0001456;1.08e-12;21!UBERON:0000020;1.64e-11;23!UBERON:0000966;2.46e-11;5!UBERON:0005388;2.46e-11;5!UBERON:0001802;2.46e-11;5!UBERON:0001032;5.38e-11;24!UBERON:0004456;5.38e-11;24!UBERON:0002203;4.64e-09;6!UBERON:0001768;4.64e-09;6!UBERON:0002200;4.64e-09;6!UBERON:0001781;5.80e-09;3!UBERON:0001782;5.80e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.76e-18,11;UBERON:0001778,1.13e-17,3;UBERON:0001775,1.13e-17,3;UBERON:0000019,2.14e-13,20;UBERON:0000047,2.14e-13,20;UBERON:0010312,2.14e-13,20;UBERON:0004088,2.14e-13,20;UBERON:0010230,2.14e-13,20;UBERON:0003072,2.14e-13,20;UBERON:0004128,2.14e-13,20;UBERON:0003071,2.14e-13,20;UBERON:0000488,2.14e-13,4;UBERON:0000970,1.02e-12,21;UBERON:0002104,1.02e-12,21;UBERON:0001456,4.25e-12,22;UBERON:0000020,5.14e-11,24;UBERON:0001032,5.14e-11,24;UBERON:0004456,5.14e-11,24;UBERON:0000966,1.53e-09,6;UBERON:0005388,1.53e-09,6;UBERON:0001802,1.53e-09,6;UBERON:0002203,4.27e-09,6;UBERON:0001768,4.27e-09,6;UBERON:0002200,4.27e-09,6;UBERON:0001782,5.69e-09,3;UBERON:0005424,5.69e-09,3;UBERON:0005085,2.51e-08,31;UBERON:0001781,6.32e-07,4 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.51255707462509,3.76939975686359,1.84453049955565,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,2.46558257895225,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,2.67643483195743,1.73472656537328,6.2084949946138,0.902838299183157,4.5481500811197,1.03473071292505,0,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,2.50844886927427,0,1.66215201785745,0.223874754722178,0,0,0,3.93617574839647,6.83294628795036,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,1.99843180798692,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,2.76125442755818,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,1.17847017308398,0.407712618220842,0.418411385249333,0,0.288950589901519,0,0,0,10.314370594079,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.315222829196793,4.56354916774483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0.233713309847224,0,0,1.0062716070103,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0,0,0.450772826991655,1.14241563650639,0,0,0.429642228169954,0.464033759878494,0,0,0,0,0,0,1.07220795687463,16.1816461018431,0.226705925512272,0,0,0,4.94082315457555,2.85069264452319,0,21.2205442098006,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0.266107110487916,0,1.02892805662451,0,0,0,17.3520986951628,0,0,0,0,0,0,0.142953088353313,3.95034029331817,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0.31020638566432,0,0.559277158988962,0,0,0,0,0,0.485710993059139,0,0,0,0,0.439762066981716,0,0,0,1.88126918544609,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41582486922776,0.764859003745869,0,1.63182127587171,0.801652215796681,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr15:74228096..74228111,+ | |||
}} |
Revision as of 08:12, 11 September 2013
Short description: | p@chr15:74228096..74228111, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74228096..74228111, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.13e-17 | 3 |
ciliated epithelial cell | 1.13e-17 | 3 |
multi-ciliated epithelial cell | 1.13e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.13e-17 | 3 |
columnar/cuboidal epithelial cell | 2.09e-12 | 27 |
neurecto-epithelial cell | 7.71e-10 | 20 |
receptor cell | 2.57e-09 | 6 |
sensory epithelial cell | 2.57e-09 | 6 |
olfactory epithelial cell | 2.57e-09 | 6 |
epithelial cell | 4.10e-09 | 253 |
retinal pigment epithelial cell | 5.69e-09 | 3 |
steroid hormone secreting cell | 1.15e-08 | 3 |
mesothelial cell | 1.30e-07 | 19 |
follicular cell of ovary | 1.75e-07 | 1 |
granulosa cell | 1.75e-07 | 1 |
visual pigment cell | 6.32e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.76e-18 | 11 |
ciliary epithelium | 1.13e-17 | 3 |
ciliary body | 1.13e-17 | 3 |
camera-type eye | 2.14e-13 | 20 |
simple eye | 2.14e-13 | 20 |
immature eye | 2.14e-13 | 20 |
ocular region | 2.14e-13 | 20 |
eyeball of camera-type eye | 2.14e-13 | 20 |
optic cup | 2.14e-13 | 20 |
optic vesicle | 2.14e-13 | 20 |
eye primordium | 2.14e-13 | 20 |
atypical epithelium | 2.14e-13 | 4 |
eye | 1.02e-12 | 21 |
visual system | 1.02e-12 | 21 |
face | 4.25e-12 | 22 |
sense organ | 5.14e-11 | 24 |
sensory system | 5.14e-11 | 24 |
entire sense organ system | 5.14e-11 | 24 |
retina | 1.53e-09 | 6 |
photoreceptor array | 1.53e-09 | 6 |
posterior segment of eyeball | 1.53e-09 | 6 |
vasculature of eye | 4.27e-09 | 6 |
uvea | 4.27e-09 | 6 |
vasculature of head | 4.27e-09 | 6 |
pigmented layer of retina | 5.69e-09 | 3 |
presumptive retinal pigmented epithelium | 5.69e-09 | 3 |
ectodermal placode | 2.51e-08 | 31 |
layer of retina | 6.32e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.85e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.