FFCP PHASE1:Hg19::chr16:86229916..86229943,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C418|description=CAGE_peak_at_chr16:86229916..86229943,+|id=chr16:86229916..86229943,+|ontology_enrichment_celltype=CL:0002504!3.57e-17!3;CL:1000279!3.57e-17!3;CL:1000280!3.57e-17!3;CL:0002622!1.85e-08!3|ontology_enrichment_celltype_v019=CL:0002504;2.94e-37;3!CL:1000279;2.94e-37;3!CL:1000280;2.94e-37;3!CL:0002622;1.58e-17;3!CL:1000487;1.12e-07;2|ontology_enrichment_celltype_v019_2=CL:0002504,2.95e-37,3;CL:1000279,2.95e-37,3;CL:1000280,2.95e-37,3;CL:0002622,1.08e-17,3;CL:1000487,1.12e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;9.86e-08;2|ontology_enrichment_disease_v019_2=DOID:3307,9.87e-08,2|ontology_enrichment_uberon=UBERON:0000059!2.31e-23!11;UBERON:0000160!2.26e-21!27;UBERON:0001155!4.54e-21!9;UBERON:0005409!2.27e-19!35;UBERON:0001007!4.84e-16!155;UBERON:0001555!4.84e-16!155;UBERON:0007026!4.84e-16!155;UBERON:0004921!3.06e-15!129;UBERON:0004185!3.06e-15!129;UBERON:0004119!2.84e-14!169;UBERON:0000925!2.84e-14!169;UBERON:0006595!2.84e-14!169;UBERON:0001046!2.77e-13!19;UBERON:0003101!4.08e-11!22;UBERON:0000079!4.08e-11!22;UBERON:0000162!1.32e-09!14;UBERON:0001353!1.32e-09!14;UBERON:0000163!1.32e-09!14;UBERON:0006866!1.32e-09!14;UBERON:0000164!1.32e-09!14;UBERON:0000931!1.32e-09!14;UBERON:0004122!6.03e-09!15;UBERON:0001135!7.38e-09!15;UBERON:0002367!3.54e-08!11;UBERON:0010147!3.54e-08!11;UBERON:0009846!3.54e-08!11;UBERON:0003353!3.54e-08!11;UBERON:0004902!3.54e-08!11;UBERON:0003820!3.54e-08!11;UBERON:0009847!3.54e-08!11;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12|ontology_enrichment_uberon_v019=UBERON:0000160;3.14e-43;17!UBERON:0005409;1.19e-42;22!UBERON:0000059;5.70e-28;11!UBERON:0004921;2.49e-27;33!UBERON:0001155;4.66e-22;9!UBERON:0001135;2.28e-13;15!UBERON:0002108;5.85e-11;4!UBERON:0002367;7.59e-11;11!UBERON:0010147;7.59e-11;11!UBERON:0003937;5.47e-10;12!UBERON:0005399;5.47e-10;12!UBERON:0003101;2.53e-09;22!UBERON:0000079;2.53e-09;22!UBERON:0001555;2.59e-09;54|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.15e-43,17;UBERON:0005409,1.26e-37,25;UBERON:0000059,4.56e-28,11;UBERON:0001155,3.95e-22,9;UBERON:0004921,1.32e-13,118;UBERON:0001135,2.13e-13,15;UBERON:0002367,6.53e-11,11;UBERON:0010147,6.53e-11,11;UBERON:0009846,6.53e-11,11;UBERON:0003353,6.53e-11,11;UBERON:0004902,6.53e-11,11;UBERON:0003820,6.53e-11,11;UBERON:0009847,6.53e-11,11;UBERON:0001046,6.54e-11,19;UBERON:0002108,7.14e-11,4;UBERON:0001007,8.31e-11,145;UBERON:0001555,8.31e-11,145;UBERON:0007026,8.31e-11,145;UBERON:0003937,4.76e-10,12;UBERON:0005399,4.76e-10,12;UBERON:0004119,1.18e-09,160;UBERON:0000925,1.18e-09,160;UBERON:0006595,1.18e-09,160;UBERON:0003101,2.39e-09,22;UBERON:0000079,2.39e-09,22;UBERON:0000162,1.09e-08,14;UBERON:0001353,1.09e-08,14;UBERON:0000163,1.09e-08,14;UBERON:0006866,1.09e-08,14;UBERON:0000164,1.09e-08,14;UBERON:0000931,1.09e-08,14;UBERON:0004122,3.83e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95184561879831,0,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61885211824983,1.64722217841633,1.41374882814824,0,0,0,0,0,0,0,3.25232493493539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04171104434093,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.449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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_at_chr16:86229916..86229943,+ | |||
|id=chr16:86229916..86229943,+ | |||
|ontology_enrichment_celltype=CL:0002504!3.57e-17!3;CL:1000279!3.57e-17!3;CL:1000280!3.57e-17!3;CL:0002622!1.85e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002504;2.94e-37;3!CL:1000279;2.94e-37;3!CL:1000280;2.94e-37;3!CL:0002622;1.58e-17;3!CL:1000487;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.95e-37,3;CL:1000279,2.95e-37,3;CL:1000280,2.95e-37,3;CL:0002622,1.08e-17,3;CL:1000487,1.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;9.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!2.31e-23!11;UBERON:0000160!2.26e-21!27;UBERON:0001155!4.54e-21!9;UBERON:0005409!2.27e-19!35;UBERON:0001007!4.84e-16!155;UBERON:0001555!4.84e-16!155;UBERON:0007026!4.84e-16!155;UBERON:0004921!3.06e-15!129;UBERON:0004185!3.06e-15!129;UBERON:0004119!2.84e-14!169;UBERON:0000925!2.84e-14!169;UBERON:0006595!2.84e-14!169;UBERON:0001046!2.77e-13!19;UBERON:0003101!4.08e-11!22;UBERON:0000079!4.08e-11!22;UBERON:0000162!1.32e-09!14;UBERON:0001353!1.32e-09!14;UBERON:0000163!1.32e-09!14;UBERON:0006866!1.32e-09!14;UBERON:0000164!1.32e-09!14;UBERON:0000931!1.32e-09!14;UBERON:0004122!6.03e-09!15;UBERON:0001135!7.38e-09!15;UBERON:0002367!3.54e-08!11;UBERON:0010147!3.54e-08!11;UBERON:0009846!3.54e-08!11;UBERON:0003353!3.54e-08!11;UBERON:0004902!3.54e-08!11;UBERON:0003820!3.54e-08!11;UBERON:0009847!3.54e-08!11;UBERON:0003937!1.69e-07!12;UBERON:0005399!1.69e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.14e-43;17!UBERON:0005409;1.19e-42;22!UBERON:0000059;5.70e-28;11!UBERON:0004921;2.49e-27;33!UBERON:0001155;4.66e-22;9!UBERON:0001135;2.28e-13;15!UBERON:0002108;5.85e-11;4!UBERON:0002367;7.59e-11;11!UBERON:0010147;7.59e-11;11!UBERON:0003937;5.47e-10;12!UBERON:0005399;5.47e-10;12!UBERON:0003101;2.53e-09;22!UBERON:0000079;2.53e-09;22!UBERON:0001555;2.59e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.15e-43,17;UBERON:0005409,1.26e-37,25;UBERON:0000059,4.56e-28,11;UBERON:0001155,3.95e-22,9;UBERON:0004921,1.32e-13,118;UBERON:0001135,2.13e-13,15;UBERON:0002367,6.53e-11,11;UBERON:0010147,6.53e-11,11;UBERON:0009846,6.53e-11,11;UBERON:0003353,6.53e-11,11;UBERON:0004902,6.53e-11,11;UBERON:0003820,6.53e-11,11;UBERON:0009847,6.53e-11,11;UBERON:0001046,6.54e-11,19;UBERON:0002108,7.14e-11,4;UBERON:0001007,8.31e-11,145;UBERON:0001555,8.31e-11,145;UBERON:0007026,8.31e-11,145;UBERON:0003937,4.76e-10,12;UBERON:0005399,4.76e-10,12;UBERON:0004119,1.18e-09,160;UBERON:0000925,1.18e-09,160;UBERON:0006595,1.18e-09,160;UBERON:0003101,2.39e-09,22;UBERON:0000079,2.39e-09,22;UBERON:0000162,1.09e-08,14;UBERON:0001353,1.09e-08,14;UBERON:0000163,1.09e-08,14;UBERON:0006866,1.09e-08,14;UBERON:0000164,1.09e-08,14;UBERON:0000931,1.09e-08,14;UBERON:0004122,3.83e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95184561879831,0,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61885211824983,1.64722217841633,1.41374882814824,0,0,0,0,0,0,0,3.25232493493539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04171104434093,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.4492401953376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,3.65263488203798,0,0,0,0,0,0,4.00855682365126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,3.0598338470554,0,1.71603825227734,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr16:86229916..86229943,+ | |||
}} |
Revision as of 11:54, 11 September 2013
Short description: | p@chr16:86229916..86229943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:86229916..86229943, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.95e-37 | 3 |
smooth muscle cell of large intestine | 2.95e-37 | 3 |
smooth muscle cell of colon | 2.95e-37 | 3 |
prostate stromal cell | 1.08e-17 | 3 |
smooth muscle cell of prostate | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.15e-43 | 17 |
gastrointestinal system | 1.26e-37 | 25 |
large intestine | 4.56e-28 | 11 |
colon | 3.95e-22 | 9 |
subdivision of digestive tract | 1.32e-13 | 118 |
smooth muscle tissue | 2.13e-13 | 15 |
prostate gland | 6.53e-11 | 11 |
male accessory sex gland | 6.53e-11 | 11 |
embryonic cloacal epithelium | 6.53e-11 | 11 |
epithelium of hindgut | 6.53e-11 | 11 |
urogenital sinus epithelium | 6.53e-11 | 11 |
prostate bud | 6.53e-11 | 11 |
prostate field | 6.53e-11 | 11 |
hindgut | 6.54e-11 | 19 |
small intestine | 7.14e-11 | 4 |
digestive system | 8.31e-11 | 145 |
digestive tract | 8.31e-11 | 145 |
primitive gut | 8.31e-11 | 145 |
sex gland | 4.76e-10 | 12 |
male reproductive gland | 4.76e-10 | 12 |
endoderm-derived structure | 1.18e-09 | 160 |
endoderm | 1.18e-09 | 160 |
presumptive endoderm | 1.18e-09 | 160 |
male organism | 2.39e-09 | 22 |
male reproductive system | 2.39e-09 | 22 |
cloaca | 1.09e-08 | 14 |
anal region | 1.09e-08 | 14 |
embryonic cloaca | 1.09e-08 | 14 |
terminal part of digestive tract | 1.09e-08 | 14 |
primitive urogenital sinus | 1.09e-08 | 14 |
proctodeum | 1.09e-08 | 14 |
genitourinary system | 3.83e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.87e-08 | 2 |
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