FFCP PHASE1:Hg19::chr17:17075989..17076004,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23164|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30321|TSSclassifier=W|UniProt=A8CGI0,A8CGI1|association_with_transcript=-7bp_to_uc010cpl.1,uc010cpm.1_5end|coexpression_cluster_id=C45|description=CAGE_peak_13_at_MPRIP_5end|id=chr17:17075989..17076004,+|ontology_enrichment_celltype=CL:0000071!5.24e-13!18;CL:0002546!5.24e-13!18;CL:0002139!1.45e-11!24;CL:0002144!4.49e-11!3;CL:0002618!8.17e-10!3;CL:0000115!7.67e-09!35;CL:0000039!4.81e-08!7;CL:0000586!4.81e-08!7|ontology_enrichment_celltype_v019=CL:0000039;3.16e-29;7!CL:0000586;3.16e-29;7!CL:0002144;9.45e-18;3|ontology_enrichment_celltype_v019_2=CL:0000039,3.65e-29,7;CL:0000586,3.65e-29,7;CL:0002144,8.00e-18,3|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10|ontology_enrichment_disease=DOID:1036!9.41e-10!8|ontology_enrichment_disease_v019=DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22|ontology_enrichment_disease_v019_2=DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22|ontology_enrichment_uberon=UBERON:0002298!1.32e-13!8;UBERON:0001986!5.24e-13!18;UBERON:0004638!5.24e-13!18;UBERON:0004852!5.24e-13!18;UBERON:0001915!4.49e-11!3;UBERON:0001982!4.49e-11!3;UBERON:0001049!1.34e-10!57;UBERON:0005068!1.34e-10!57;UBERON:0006241!1.34e-10!57;UBERON:0007135!1.34e-10!57;UBERON:0001896!1.48e-10!3;UBERON:0005290!1.48e-10!3;UBERON:0010096!1.48e-10!3;UBERON:0000487!2.61e-10!22;UBERON:0003076!1.28e-09!15;UBERON:0003057!1.28e-09!15;UBERON:0006914!7.37e-09!25;UBERON:0003075!1.24e-08!86;UBERON:0007284!1.24e-08!86;UBERON:0002346!4.70e-08!90;UBERON:0002616!1.92e-07!59;UBERON:0005743!1.95e-07!86;UBERON:0001017!4.79e-07!82;UBERON:0007023!5.01e-07!115;UBERON:0000473!5.02e-07!8;UBERON:0000955!9.66e-07!69;UBERON:0006238!9.66e-07!69|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0001896;9.45e-18;3!UBERON:0010523;9.45e-18;3!UBERON:0001915;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0001982;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0002298;1.44e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0010523,8.00e-18,3;UBERON:0001915,8.00e-18,3;UBERON:0001982,8.00e-18,3;UBERON:0001896,9.46e-18,3;UBERON:0005290,9.46e-18,3;UBERON:0010096,9.46e-18,3;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0002298,1.44e-09,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,1.20848795132744,0.760272105718513,0.732186172644509,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.248385611765534,0,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.713921808193872,1.06886962106224,3.6757959813938,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@MPRIP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30321 | |||
|TSSclassifier=W | |||
|UniProt=A8CGI0,A8CGI1 | |||
|association_with_transcript=-7bp_to_uc010cpl.1,uc010cpm.1_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_13_at_MPRIP_5end | |||
|id=chr17:17075989..17076004,+ | |||
|ontology_enrichment_celltype=CL:0000071!5.24e-13!18;CL:0002546!5.24e-13!18;CL:0002139!1.45e-11!24;CL:0002144!4.49e-11!3;CL:0002618!8.17e-10!3;CL:0000115!7.67e-09!35;CL:0000039!4.81e-08!7;CL:0000586!4.81e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.16e-29;7!CL:0000586;3.16e-29;7!CL:0002144;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.65e-29,7;CL:0000586,3.65e-29,7;CL:0002144,8.00e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |||
|ontology_enrichment_disease=DOID:1036!9.41e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.32e-13!8;UBERON:0001986!5.24e-13!18;UBERON:0004638!5.24e-13!18;UBERON:0004852!5.24e-13!18;UBERON:0001915!4.49e-11!3;UBERON:0001982!4.49e-11!3;UBERON:0001049!1.34e-10!57;UBERON:0005068!1.34e-10!57;UBERON:0006241!1.34e-10!57;UBERON:0007135!1.34e-10!57;UBERON:0001896!1.48e-10!3;UBERON:0005290!1.48e-10!3;UBERON:0010096!1.48e-10!3;UBERON:0000487!2.61e-10!22;UBERON:0003076!1.28e-09!15;UBERON:0003057!1.28e-09!15;UBERON:0006914!7.37e-09!25;UBERON:0003075!1.24e-08!86;UBERON:0007284!1.24e-08!86;UBERON:0002346!4.70e-08!90;UBERON:0002616!1.92e-07!59;UBERON:0005743!1.95e-07!86;UBERON:0001017!4.79e-07!82;UBERON:0007023!5.01e-07!115;UBERON:0000473!5.02e-07!8;UBERON:0000955!9.66e-07!69;UBERON:0006238!9.66e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0001896;9.45e-18;3!UBERON:0010523;9.45e-18;3!UBERON:0001915;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0001982;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0002298;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0010523,8.00e-18,3;UBERON:0001915,8.00e-18,3;UBERON:0001982,8.00e-18,3;UBERON:0001896,9.46e-18,3;UBERON:0005290,9.46e-18,3;UBERON:0010096,9.46e-18,3;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0002298,1.44e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,1.20848795132744,0.760272105718513,0.732186172644509,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.248385611765534,0,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.713921808193872,1.06886962106224,3.6757959813938,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@MPRIP | |||
}} |
Revision as of 12:25, 11 September 2013
Short description: | p13@MPRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_MPRIP_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -7bp_to_uc010cpl.1, uc010cpm.1_5end |
EntrezGene: | MPRIP |
HGNC: | 30321 |
UniProt: | A8CGI0A8CGI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.65e-29 | 7 |
germ cell | 3.65e-29 | 7 |
capillary endothelial cell | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.11e-25 | 8 |
male reproductive organ | 5.14e-19 | 11 |
microcirculatory vessel | 8.00e-18 | 3 |
endothelium of capillary | 8.00e-18 | 3 |
capillary | 8.00e-18 | 3 |
medulla oblongata | 9.46e-18 | 3 |
myelencephalon | 9.46e-18 | 3 |
future myelencephalon | 9.46e-18 | 3 |
gonad | 1.69e-10 | 21 |
indifferent external genitalia | 1.69e-10 | 21 |
indifferent gonad | 1.69e-10 | 21 |
gonad primordium | 1.69e-10 | 21 |
external genitalia | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
brainstem | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.