FFCP PHASE1:Hg19::chr17:61600483..61600515,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81033|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18862|TSSclassifier=N|UniProt=Q9H252|association_with_transcript=-179bp_to_ENST00000314672,ENST00000456941,NM_030779,NM_173092,uc002jax.1,uc002jay.2,uc002jaz.1,uc010wpl.1,uc010wpm.1_5end|coexpression_cluster_id=C150|description=CAGE_peak_2_at_KCNH6_5end|id=chr17:61600483..61600515,+|ontology_enrichment_celltype=CL:0000242!7.36e-15!2;CL:0000167!6.97e-08!1;CL:0000164!6.97e-08!1;CL:0000502!6.97e-08!1;CL:0000172!6.97e-08!1;CL:0000173!6.97e-08!1;CL:0002351!6.97e-08!1|ontology_enrichment_celltype_v019=CL:0000123;3.99e-41;2!CL:0000242;3.99e-41;2!CL:0000312;3.95e-17;5!CL:0000240;1.90e-14;6!CL:0000311;1.90e-14;6!CL:0000079;1.90e-14;6!CL:0000237;1.90e-14;6!CL:0002535;3.70e-11;2!CL:0000095;3.63e-10;17!CL:0000362;5.93e-10;9!CL:0002319;2.52e-07;25|ontology_enrichment_celltype_v019_2=CL:0000242,3.99e-41,2;CL:0000312,3.95e-17,5;CL:0000240,1.90e-14,6;CL:0000311,1.90e-14,6;CL:0000079,1.90e-14,6;CL:0000237,1.90e-14,6;CL:0000036,1.90e-14,6;CL:0000357,1.90e-14,6;CL:0000114,1.90e-14,6;CL:0002535,3.70e-11,2;CL:0000095,3.57e-10,17;CL:0000123,3.57e-10,17;CL:0000362,5.93e-10,9;CL:0002319,2.49e-07,25|ontology_enrichment_development_v019=CL:0000357;1.90e-14;6!CL:0000114;1.90e-14;6!UBERON:0003056;6.13e-08;3|ontology_enrichment_disease=DOID:3119!1.11e-11!14;DOID:169!3.03e-10!6;DOID:4430!6.97e-08!1;DOID:5409!1.93e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003296!7.51e-16!4;UBERON:0010133!7.51e-16!4;UBERON:0001905!1.18e-14!2;UBERON:0002757!1.18e-14!2;UBERON:0010134!1.18e-14!2;UBERON:0002784!1.18e-14!2;UBERON:0005408!1.18e-14!2;UBERON:0001899!1.18e-14!2;UBERON:0002148!1.99e-13!2;UBERON:0009662!1.99e-13!2;UBERON:0000073!3.38e-10!94;UBERON:0001016!3.38e-10!94;UBERON:0001894!2.87e-09!7;UBERON:0006222!2.87e-09!7;UBERON:0000988!2.97e-09!3;UBERON:0006331!2.97e-09!3;UBERON:0005743!2.94e-08!86;UBERON:0003112!1.18e-07!1;UBERON:0000032!1.18e-07!1;UBERON:0005253!1.18e-07!1;UBERON:0003128!1.18e-07!1;UBERON:0002241!1.18e-07!1;UBERON:0001703!1.18e-07!1;UBERON:0004761!1.18e-07!1;UBERON:0009617!1.18e-07!1;UBERON:0002298!1.58e-07!8;UBERON:0002902!1.99e-07!1;UBERON:0009899!1.99e-07!1;UBERON:0000955!2.37e-07!69;UBERON:0006238!2.37e-07!69;UBERON:0001017!2.84e-07!82;UBERON:0003075!5.80e-07!86;UBERON:0007284!5.80e-07!86|ontology_enrichment_uberon_v019=UBERON:0003296;8.25e-45;4!UBERON:0010133;8.25e-45;4!UBERON:0001905;1.49e-40;2!UBERON:0002757;1.49e-40;2!UBERON:0010134;1.49e-40;2!UBERON:0005408;1.49e-40;2!UBERON:0001899;1.49e-40;2!UBERON:0001894;5.53e-26;7!UBERON:0002784;7.36e-21;4!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2!UBERON:0000007;4.52e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0003296,8.89e-45,4;UBERON:0010133,8.89e-45,4;UBERON:0001905,1.64e-40,2;UBERON:0002757,1.64e-40,2;UBERON:0010134,1.64e-40,2;UBERON:0005408,1.64e-40,2;UBERON:0001899,1.64e-40,2;UBERON:0001894,5.78e-26,7;UBERON:0006222,5.78e-26,7;UBERON:0002784,7.74e-21,4;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2;UBERON:0000007,4.52e-11,2;UBERON:0010371,9.89e-07,104|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9266554085562,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0,0,0,43.0868113342331,33.7665996663223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.999651404592,7.0619581665953,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,7.7426669749036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,4.50756118656259,0.150962843566674,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@KCNH6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=81033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18862 | |||
|TSSclassifier=N | |||
|UniProt=Q9H252 | |||
|association_with_transcript=-179bp_to_ENST00000314672,ENST00000456941,NM_030779,NM_173092,uc002jax.1,uc002jay.2,uc002jaz.1,uc010wpl.1,uc010wpm.1_5end | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_2_at_KCNH6_5end | |||
|id=chr17:61600483..61600515,+ | |||
|ontology_enrichment_celltype=CL:0000242!7.36e-15!2;CL:0000167!6.97e-08!1;CL:0000164!6.97e-08!1;CL:0000502!6.97e-08!1;CL:0000172!6.97e-08!1;CL:0000173!6.97e-08!1;CL:0002351!6.97e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.99e-41;2!CL:0000242;3.99e-41;2!CL:0000312;3.95e-17;5!CL:0000240;1.90e-14;6!CL:0000311;1.90e-14;6!CL:0000079;1.90e-14;6!CL:0000237;1.90e-14;6!CL:0002535;3.70e-11;2!CL:0000095;3.63e-10;17!CL:0000362;5.93e-10;9!CL:0002319;2.52e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.99e-41,2;CL:0000312,3.95e-17,5;CL:0000240,1.90e-14,6;CL:0000311,1.90e-14,6;CL:0000079,1.90e-14,6;CL:0000237,1.90e-14,6;CL:0000036,1.90e-14,6;CL:0000357,1.90e-14,6;CL:0000114,1.90e-14,6;CL:0002535,3.70e-11,2;CL:0000095,3.57e-10,17;CL:0000123,3.57e-10,17;CL:0000362,5.93e-10,9;CL:0002319,2.49e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-14;6!CL:0000114;1.90e-14;6!UBERON:0003056;6.13e-08;3 | |||
|ontology_enrichment_disease=DOID:3119!1.11e-11!14;DOID:169!3.03e-10!6;DOID:4430!6.97e-08!1;DOID:5409!1.93e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!7.51e-16!4;UBERON:0010133!7.51e-16!4;UBERON:0001905!1.18e-14!2;UBERON:0002757!1.18e-14!2;UBERON:0010134!1.18e-14!2;UBERON:0002784!1.18e-14!2;UBERON:0005408!1.18e-14!2;UBERON:0001899!1.18e-14!2;UBERON:0002148!1.99e-13!2;UBERON:0009662!1.99e-13!2;UBERON:0000073!3.38e-10!94;UBERON:0001016!3.38e-10!94;UBERON:0001894!2.87e-09!7;UBERON:0006222!2.87e-09!7;UBERON:0000988!2.97e-09!3;UBERON:0006331!2.97e-09!3;UBERON:0005743!2.94e-08!86;UBERON:0003112!1.18e-07!1;UBERON:0000032!1.18e-07!1;UBERON:0005253!1.18e-07!1;UBERON:0003128!1.18e-07!1;UBERON:0002241!1.18e-07!1;UBERON:0001703!1.18e-07!1;UBERON:0004761!1.18e-07!1;UBERON:0009617!1.18e-07!1;UBERON:0002298!1.58e-07!8;UBERON:0002902!1.99e-07!1;UBERON:0009899!1.99e-07!1;UBERON:0000955!2.37e-07!69;UBERON:0006238!2.37e-07!69;UBERON:0001017!2.84e-07!82;UBERON:0003075!5.80e-07!86;UBERON:0007284!5.80e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.25e-45;4!UBERON:0010133;8.25e-45;4!UBERON:0001905;1.49e-40;2!UBERON:0002757;1.49e-40;2!UBERON:0010134;1.49e-40;2!UBERON:0005408;1.49e-40;2!UBERON:0001899;1.49e-40;2!UBERON:0001894;5.53e-26;7!UBERON:0002784;7.36e-21;4!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2!UBERON:0000007;4.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,8.89e-45,4;UBERON:0010133,8.89e-45,4;UBERON:0001905,1.64e-40,2;UBERON:0002757,1.64e-40,2;UBERON:0010134,1.64e-40,2;UBERON:0005408,1.64e-40,2;UBERON:0001899,1.64e-40,2;UBERON:0001894,5.78e-26,7;UBERON:0006222,5.78e-26,7;UBERON:0002784,7.74e-21,4;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2;UBERON:0000007,4.52e-11,2;UBERON:0010371,9.89e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9266554085562,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0,0,0,43.0868113342331,33.7665996663223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.999651404592,7.0619581665953,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,7.7426669749036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,4.50756118656259,0.150962843566674,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@KCNH6 | |||
}} |
Revision as of 14:59, 11 September 2013
Short description: | p2@KCNH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KCNH6_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -179bp_to_ENST00000314672, ENST00000456941, NM_030779, NM_173092, uc002jax.1, uc002jay.2, uc002jaz.1, uc010wpl.1, uc010wpm.1_5end |
EntrezGene: | KCNH6 |
HGNC: | 18862 |
UniProt: | Q9H252 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.99e-41 | 2 |
keratinocyte | 3.95e-17 | 5 |
stratified squamous epithelial cell | 1.90e-14 | 6 |
keratin accumulating cell | 1.90e-14 | 6 |
stratified epithelial cell | 1.90e-14 | 6 |
keratinizing barrier epithelial cell | 1.90e-14 | 6 |
epithelial fate stem cell | 1.90e-14 | 6 |
stratified epithelial stem cell | 1.90e-14 | 6 |
surface ectodermal cell | 1.90e-14 | 6 |
epithelial cell of cervix | 3.70e-11 | 2 |
neuron associated cell | 3.57e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.57e-10 | 17 |
epidermal cell | 5.93e-10 | 9 |
neural cell | 2.49e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 8.89e-45 | 4 |
neuroendocrine gland | 8.89e-45 | 4 |
pineal body | 1.64e-40 | 2 |
regional part of epithalamus | 1.64e-40 | 2 |
secretory circumventricular organ | 1.64e-40 | 2 |
circumventricular organ | 1.64e-40 | 2 |
epithalamus | 1.64e-40 | 2 |
diencephalon | 5.78e-26 | 7 |
future diencephalon | 5.78e-26 | 7 |
regional part of diencephalon | 7.74e-21 | 4 |
uterine epithelium | 3.70e-11 | 2 |
cervix epithelium | 3.70e-11 | 2 |
pituitary gland | 4.52e-11 | 2 |
ecto-epithelium | 9.89e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.