FFCP PHASE1:Hg19::chr19:7797045..7797065,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=339390|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24591|TSSclassifier=S|UniProt=Q6UXB4,E7EQ56,B7ZKQ2,Q08G24,Q6XYD1|association_with_transcript=0bp_to_ENST00000328853,ENST00000381308,NM_001244856,NM_198492,uc002mhp.3_5end|coexpression_cluster_id=C2505|description=CAGE_peak_2_at_CLEC4G_5end|id=chr19:7797045..7797065,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000840;2.20e-19;5!CL:0000990;3.90e-13;8!CL:0000451;7.47e-11;10|ontology_enrichment_celltype_v019_2=CL:0000840,2.34e-19,5;CL:0001029,2.34e-19,5;CL:0000990,4.06e-13,8;CL:0000451,7.72e-11,10|ontology_enrichment_development_v019=UBERON:0006215;3.48e-17;3!UBERON:0010227;4.53e-14;1!UBERON:0010115;8.05e-14;1!UBERON:0006965;1.93e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.29e-36!115;UBERON:0004177!3.70e-08!7;UBERON:0005057!4.57e-08!26|ontology_enrichment_uberon_v019=UBERON:0002079;4.53e-14;1!UBERON:0002363;8.05e-14;1!UBERON:0000029;8.05e-14;1!UBERON:0002037;4.55e-09;6!UBERON:0002081;1.12e-07;2!UBERON:0002360;1.50e-07;2!UBERON:0000094;1.50e-07;2!UBERON:0010743;1.50e-07;2!UBERON:0003127;2.32e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002079,4.53e-14,1;UBERON:0002363,7.55e-14,1;UBERON:0007645,7.55e-14,1;UBERON:0007647,7.55e-14,1;UBERON:0010115,7.55e-14,1;UBERON:0000029,8.58e-14,1;UBERON:0002037,4.74e-09,6;UBERON:0006215,4.74e-09,6;UBERON:0007023,9.41e-08,114;UBERON:0002081,1.12e-07,2;UBERON:0010227,1.12e-07,2;UBERON:0002360,1.45e-07,2;UBERON:0000094,1.45e-07,2;UBERON:0010743,1.45e-07,2;UBERON:0003127,2.40e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,2.27183175558278,3.30846500868608,15.821997301745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42475863650862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,1.52581736317083,2.21158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,3.60163503882381,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,5.71756261098694,0.662091970365432,0,0,0,0,0,0,0,0,7.4741639175822,3.97520666736664,0,0,0,0,0,0,0,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0.25458863311266,0,0.217716747896961,0,0.0673520530145875,1.2192774916755,0,0,0,0,0,0,0,0,0.665756774185513,2.21401172950129,0|short_description=p2@CLEC4G}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=339390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24591 | |||
|TSSclassifier=S | |||
|UniProt=Q6UXB4,E7EQ56,B7ZKQ2,Q08G24,Q6XYD1 | |||
|association_with_transcript=0bp_to_ENST00000328853,ENST00000381308,NM_001244856,NM_198492,uc002mhp.3_5end | |||
|coexpression_cluster_id=C2505 | |||
|description=CAGE_peak_2_at_CLEC4G_5end | |||
|id=chr19:7797045..7797065,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.20e-19;5!CL:0000990;3.90e-13;8!CL:0000451;7.47e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.34e-19,5;CL:0001029,2.34e-19,5;CL:0000990,4.06e-13,8;CL:0000451,7.72e-11,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-17;3!UBERON:0010227;4.53e-14;1!UBERON:0010115;8.05e-14;1!UBERON:0006965;1.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-36!115;UBERON:0004177!3.70e-08!7;UBERON:0005057!4.57e-08!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.53e-14;1!UBERON:0002363;8.05e-14;1!UBERON:0000029;8.05e-14;1!UBERON:0002037;4.55e-09;6!UBERON:0002081;1.12e-07;2!UBERON:0002360;1.50e-07;2!UBERON:0000094;1.50e-07;2!UBERON:0010743;1.50e-07;2!UBERON:0003127;2.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,4.53e-14,1;UBERON:0002363,7.55e-14,1;UBERON:0007645,7.55e-14,1;UBERON:0007647,7.55e-14,1;UBERON:0010115,7.55e-14,1;UBERON:0000029,8.58e-14,1;UBERON:0002037,4.74e-09,6;UBERON:0006215,4.74e-09,6;UBERON:0007023,9.41e-08,114;UBERON:0002081,1.12e-07,2;UBERON:0010227,1.12e-07,2;UBERON:0002360,1.45e-07,2;UBERON:0000094,1.45e-07,2;UBERON:0010743,1.45e-07,2;UBERON:0003127,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,2.27183175558278,3.30846500868608,15.821997301745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42475863650862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,1.52581736317083,2.21158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,3.60163503882381,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,5.71756261098694,0.662091970365432,0,0,0,0,0,0,0,0,7.4741639175822,3.97520666736664,0,0,0,0,0,0,0,3.47316215268366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0.25458863311266,0,0.217716747896961,0,0.0673520530145875,1.2192774916755,0,0,0,0,0,0,0,0,0.665756774185513,2.21401172950129,0 | |||
|short_description=p2@CLEC4G | |||
}} |
Revision as of 22:56, 11 September 2013
Short description: | p2@CLEC4G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLEC4G_5end |
Coexpression cluster: | C2505_Hepatocyte_lymph_vein_liver_Dendritic_left_submaxillary |
Association with transcript: | 0bp_to_ENST00000328853, ENST00000381308, NM_001244856, NM_198492, uc002mhp.3_5end |
EntrezGene: | CLEC4G |
HGNC: | 24591 |
UniProt: | Q6UXB4E7EQ56B7ZKQ2Q08G24Q6XYD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.34e-19 | 5 |
common dendritic progenitor | 2.34e-19 | 5 |
conventional dendritic cell | 4.06e-13 | 8 |
dendritic cell | 7.72e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 4.53e-14 | 1 |
dura mater | 7.55e-14 | 1 |
future meninx | 7.55e-14 | 1 |
ectomeninx | 7.55e-14 | 1 |
future dura mater | 7.55e-14 | 1 |
lymph node | 8.58e-14 | 1 |
cerebellum | 4.74e-09 | 6 |
rhombic lip | 4.74e-09 | 6 |
adult organism | 9.41e-08 | 114 |
cardiac atrium | 1.12e-07 | 2 |
future cardiac atrium | 1.12e-07 | 2 |
meninx | 1.45e-07 | 2 |
membrane organ | 1.45e-07 | 2 |
meningeal cluster | 1.45e-07 | 2 |
open tracheal system trachea | 2.40e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.