FFCP PHASE1:Hg19::chr19:10530880..10530900,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10530880..10530900,-|id=chr19:10530880..10530900,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0001014;6.97e-11;2!CL:0001016;6.97e-11;2!CL:0000333;4.87e-09;5|ontology_enrichment_celltype_v019_2=CL:0001014,4.06e-11,2;CL:0001016,4.06e-11,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!2.16e-19!51;DOID:0060083!2.16e-19!51;DOID:162!5.10e-19!235;DOID:14566!4.52e-18!239;DOID:1240!4.58e-16!39;DOID:0050686!5.02e-16!137;DOID:8692!1.65e-12!31;DOID:1036!6.02e-08!8;DOID:171!1.12e-07!10|ontology_enrichment_disease_v019=DOID:8692;1.23e-13;31!DOID:171;1.36e-11;10!DOID:2531;3.02e-11;51!DOID:0060083;3.02e-11;51!DOID:1036;8.89e-10;8!DOID:1240;7.49e-09;39!DOID:0060058;5.63e-08;10!DOID:169;1.32e-07;6!DOID:3095;3.78e-07;22!DOID:2994;3.78e-07;22|ontology_enrichment_disease_v019_2=DOID:0050686,8.69e-18,137;DOID:162,8.76e-18,235;DOID:14566,2.91e-17,239;DOID:2531,2.04e-15,51;DOID:0060083,2.04e-15,51;DOID:8692,1.47e-13,31;DOID:171,2.13e-11,10;DOID:1240,2.13e-10,39;DOID:1036,7.33e-10,8;DOID:0060058,4.96e-08,10;DOID:169,2.12e-07,6;DOID:3095,5.02e-07,22;DOID:2994,5.02e-07,22|ontology_enrichment_uberon=UBERON:0000013!5.11e-07!5;UBERON:0002410!5.11e-07!5|ontology_enrichment_uberon_v019=UBERON:0000013;4.87e-09;5!UBERON:0002410;4.87e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.65e-09,5;UBERON:0002410,8.65e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,1.47187681102573,2.27470771979874,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0.829050053357545,0.579606171470105,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0.448524337381443,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.915694648183434,0.41254749960294,0,0,0,0,0.308097234229289,0,0.551346289938122,0,0.290033387828457,0.340906509664404,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.557409525377156,0.865615277858669,0,0.159426272728822,3.39284931435788,0,0,1.29848776109822,0,0.228234679033192,0.783399478865116,0,1.01575066680962,0.481764225311099,0.403599414382095,0,0,0,0,0,0,0.835218521685727,1.23087398947712,3.51592382018778,0.33307196799782,1.4098700508785,0,0,2.6699314784893,0.557216921387392,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,1.74962768029953,0,0,0.60298219312704,0,0,0,0,1.0893846351899,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,1.57916962432026,2.15668787749514,1.34257269580674,1.89753732724185,0.317873157960757,0.210998064528027,0,0,4.32777279484182,0,0,0,0.593042257361244,1.72989514525104,0.939797545549098,0,0,0,1.64209310294099,0,0,0,0,0,0,1.50323419414493,0.103688191397247,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0,0.174118413160805,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0,0.225980740780532,0.411125773940253,0.794858446811959,0.0633107959558787,0,0,0,0.39961921916426,0,1.14536596165916,0,0,0.621262677827163,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.799791132412,3.0952078182318,0.0607495566580247,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0,3.04366996859708,0,0,1.42732666772484,0.470531639396343,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,1.60037594541211,0,2.27006381426734,0,0,0,1.15104934173287,0.323474434190045,0.786329709279482,1.41972529649618,1.86705782949428,0.212574920101683,1.11542187833102,1.11728983594649,0,2.76016107504387,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0,0,0,2.83127336034577,0,0,0,0,0.795664888465099,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,1.60710550763486,0,0,0,0,0.345701962667338,0,0,0.197318320688547,0.118193840883968,0.111231401892069,0,0.314231179832004,0,0,0,0,0,5.68849002237816,1.3948971044175,0.695433089210318,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.79055697645231,1.42704108933082,0,6.81631203821661,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,0.352894871715692,0,0,0,0,0.946629373159108,0.271965960763659,0,0,0,0,0,0,0,1.39368351112581,0.203977659483963,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:10530880..10530900,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:10530880..10530900,- | |||
|id=chr19:10530880..10530900,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.97e-11;2!CL:0001016;6.97e-11;2!CL:0000333;4.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.06e-11,2;CL:0001016,4.06e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.16e-19!51;DOID:0060083!2.16e-19!51;DOID:162!5.10e-19!235;DOID:14566!4.52e-18!239;DOID:1240!4.58e-16!39;DOID:0050686!5.02e-16!137;DOID:8692!1.65e-12!31;DOID:1036!6.02e-08!8;DOID:171!1.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.23e-13;31!DOID:171;1.36e-11;10!DOID:2531;3.02e-11;51!DOID:0060083;3.02e-11;51!DOID:1036;8.89e-10;8!DOID:1240;7.49e-09;39!DOID:0060058;5.63e-08;10!DOID:169;1.32e-07;6!DOID:3095;3.78e-07;22!DOID:2994;3.78e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,8.69e-18,137;DOID:162,8.76e-18,235;DOID:14566,2.91e-17,239;DOID:2531,2.04e-15,51;DOID:0060083,2.04e-15,51;DOID:8692,1.47e-13,31;DOID:171,2.13e-11,10;DOID:1240,2.13e-10,39;DOID:1036,7.33e-10,8;DOID:0060058,4.96e-08,10;DOID:169,2.12e-07,6;DOID:3095,5.02e-07,22;DOID:2994,5.02e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.11e-07!5;UBERON:0002410!5.11e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.87e-09;5!UBERON:0002410;4.87e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.65e-09,5;UBERON:0002410,8.65e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,1.47187681102573,2.27470771979874,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0.829050053357545,0.579606171470105,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0.448524337381443,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.915694648183434,0.41254749960294,0,0,0,0,0.308097234229289,0,0.551346289938122,0,0.290033387828457,0.340906509664404,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.557409525377156,0.865615277858669,0,0.159426272728822,3.39284931435788,0,0,1.29848776109822,0,0.228234679033192,0.783399478865116,0,1.01575066680962,0.481764225311099,0.403599414382095,0,0,0,0,0,0,0.835218521685727,1.23087398947712,3.51592382018778,0.33307196799782,1.4098700508785,0,0,2.6699314784893,0.557216921387392,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,1.74962768029953,0,0,0.60298219312704,0,0,0,0,1.0893846351899,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,1.57916962432026,2.15668787749514,1.34257269580674,1.89753732724185,0.317873157960757,0.210998064528027,0,0,4.32777279484182,0,0,0,0.593042257361244,1.72989514525104,0.939797545549098,0,0,0,1.64209310294099,0,0,0,0,0,0,1.50323419414493,0.103688191397247,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0,0.174118413160805,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0,0.225980740780532,0.411125773940253,0.794858446811959,0.0633107959558787,0,0,0,0.39961921916426,0,1.14536596165916,0,0,0.621262677827163,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.799791132412,3.0952078182318,0.0607495566580247,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0,3.04366996859708,0,0,1.42732666772484,0.470531639396343,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,1.60037594541211,0,2.27006381426734,0,0,0,1.15104934173287,0.323474434190045,0.786329709279482,1.41972529649618,1.86705782949428,0.212574920101683,1.11542187833102,1.11728983594649,0,2.76016107504387,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0,0,0,2.83127336034577,0,0,0,0,0.795664888465099,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,1.60710550763486,0,0,0,0,0.345701962667338,0,0,0.197318320688547,0.118193840883968,0.111231401892069,0,0.314231179832004,0,0,0,0,0,5.68849002237816,1.3948971044175,0.695433089210318,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.79055697645231,1.42704108933082,0,6.81631203821661,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,0.352894871715692,0,0,0,0,0.946629373159108,0.271965960763659,0,0,0,0,0,0,0,1.39368351112581,0.203977659483963,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:10530880..10530900,- | |||
}} |
Revision as of 18:33, 11 September 2013
Short description: | p@chr19:10530880..10530900, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10530880..10530900, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.06e-11 | 2 |
immature CD1a-positive Langerhans cell | 4.06e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.65e-09 | 5 |
autonomic nervous system | 8.65e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 8.69e-18 | 137 |
cancer | 8.76e-18 | 235 |
disease of cellular proliferation | 2.91e-17 | 239 |
hematologic cancer | 2.04e-15 | 51 |
immune system cancer | 2.04e-15 | 51 |
myeloid leukemia | 1.47e-13 | 31 |
neuroectodermal tumor | 2.13e-11 | 10 |
leukemia | 2.13e-10 | 39 |
chronic leukemia | 7.33e-10 | 8 |
lymphoma | 4.96e-08 | 10 |
neuroendocrine tumor | 2.12e-07 | 6 |
germ cell and embryonal cancer | 5.02e-07 | 22 |
germ cell cancer | 5.02e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.