FFCP PHASE1:Hg19::chr19:36545320..36545335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=199745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23191|TSSclassifier=S|UniProt=|association_with_transcript=-148bp_to_uc010xtb.1_5end|description=CAGE_peak_5_at_THAP8_5end|id=chr19:36545320..36545335,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;7.44e-18;5!CL:0002321;9.82e-14;15!CL:0000148;5.73e-12;10!CL:0000147;2.35e-08;14!CL:0000075;5.23e-07;27|ontology_enrichment_celltype_v019_2=CL:0002322,1.33e-18,5;CL:0000148,1.40e-12,10;CL:0000541,1.40e-12,10;CL:0000147,8.89e-09,14;CL:0000075,2.51e-07,27|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;9.12e-07;22!DOID:2994;9.12e-07;22|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!5.90e-07!219|ontology_enrichment_uberon_v019=UBERON:0003714;8.69e-08;2!UBERON:0005162;8.69e-08;2!UBERON:0000122;8.69e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.93e-08,2;UBERON:0005162,7.65e-08,2;UBERON:0000122,7.65e-08,2|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,0.816002764977012,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0.30120591877825,1.10926203050036,0.46480320348181,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0.289803085735052,0,0,1.04535523804977,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.665188192387692,0.43917392846563,0.589405839739707,0.728590576585084,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0.49333509683432,0,0.538842688278752,0,0.302714855289863,0,0.468642863667593,0.312160076830321,1.1409436430889,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0.386521706326594,0.545492241181669,0,3.41526377162867,2.51806559810822,1.62671520017326,1.65857688024593,1.7662459561294,2.18986415445498,0,0,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0,0.55146986366197,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0,0.740707561268237,0.325808305310325,0,1.44331342025273,0.927443239800615,0.117408694235822,0.433099343283221,0.925971025153221,0.190254152234598,1.58040879591855,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0.766765358330422,0,0.264145302039678,0.207328115540772,0.576479813667846,0.12624243342638,0.126995788584338,0.763976851116555,2.34434894420094,1.71072446022705,0.308482478109971,0,1.42913216315289,0.112131084345361,0,0.2933531432838,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,1.20575750823834,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.336255431980582,0,0,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,1.00034104211935,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,0.783204629850962,0.686286847621712,0,0.215714200818617,0,1.21251028578504,0,0,0,0,0.561320188866147,0.512556597022804,0,0.482561763430822,0,0,0,0.164254312027618,0,0.348631135379878,0.120859449591622,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0.770153371044148,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.812839312631559,3.01013864312912,0.764628819135115,0.831076008928724,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=199745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23191 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-148bp_to_uc010xtb.1_5end | |||
|description=CAGE_peak_5_at_THAP8_5end | |||
|id=chr19:36545320..36545335,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.44e-18;5!CL:0002321;9.82e-14;15!CL:0000148;5.73e-12;10!CL:0000147;2.35e-08;14!CL:0000075;5.23e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.33e-18,5;CL:0000148,1.40e-12,10;CL:0000541,1.40e-12,10;CL:0000147,8.89e-09,14;CL:0000075,2.51e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;9.12e-07;22!DOID:2994;9.12e-07;22 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!5.90e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;8.69e-08;2!UBERON:0005162;8.69e-08;2!UBERON:0000122;8.69e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.93e-08,2;UBERON:0005162,7.65e-08,2;UBERON:0000122,7.65e-08,2 | |||
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| |||
|short_description=p5@THAP8 | |||
}} |
Revision as of 20:18, 11 September 2013
Short description: | p5@THAP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_THAP8_5end |
Coexpression cluster: | NA |
Association with transcript: | -148bp_to_uc010xtb.1_5end |
EntrezGene: | THAP8 |
HGNC: | 23191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.33e-18 | 5 |
melanocyte | 1.40e-12 | 10 |
melanoblast | 1.40e-12 | 10 |
pigment cell | 8.89e-09 | 14 |
columnar/cuboidal epithelial cell | 2.51e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.93e-08 | 2 |
multi cell component structure | 7.65e-08 | 2 |
neuron projection bundle | 7.65e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.