FFCP PHASE1:Hg19::chr19:51981787..51981799,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=729767|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31949|TSSclassifier=W|UniProt=A8MTB9|association_with_transcript=57bp_to_ENST00000451086_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_CEACAM18_5end|id=chr19:51981787..51981799,+|ontology_enrichment_celltype=CL:0002563!1.83e-13!4;CL:0002253!1.64e-07!2|ontology_enrichment_celltype_v019=CL:0002231;1.81e-09;3!CL:0002563;1.86e-07;4|ontology_enrichment_celltype_v019_2=CL:0002231,1.81e-09,3;CL:0002563,1.80e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3119!1.45e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001052!1.03e-28!4;UBERON:0000160!5.14e-28!27;UBERON:0005409!3.29e-27!35;UBERON:0004907!4.04e-23!5;UBERON:0000059!1.39e-18!11;UBERON:0001242!1.83e-13!4;UBERON:0001262!1.83e-13!4;UBERON:0004786!1.83e-13!4;UBERON:0004808!1.83e-13!4;UBERON:0001277!1.83e-13!4;UBERON:0003350!5.85e-11!5;UBERON:0001046!8.24e-11!19;UBERON:0004921!1.91e-08!129;UBERON:0004185!1.91e-08!129;UBERON:0002108!3.15e-08!14;UBERON:0001007!8.02e-07!155;UBERON:0001555!8.02e-07!155;UBERON:0007026!8.02e-07!155|ontology_enrichment_uberon_v019=UBERON:0000160;1.76e-49;17!UBERON:0002108;3.47e-45;4!UBERON:0005409;8.20e-39;22!UBERON:0004921;1.92e-21;33!UBERON:0000059;4.42e-10;11!UBERON:0001555;9.43e-10;54!UBERON:0002114;1.30e-09;2!UBERON:0001052;1.49e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0001007;2.37e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-49,17;UBERON:0002108,3.47e-45,4;UBERON:0005409,2.17e-34,25;UBERON:0004921,3.10e-10,118;UBERON:0000059,4.42e-10,11;UBERON:0002114,1.30e-09,2;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0001052,1.49e-07,4;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4;UBERON:0011216,6.23e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62528318967304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.565412285735763,0,0,13.2686346755009,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2108865325516,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.692466539139,8.08670373864642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@CEACAM18}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=729767 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31949 | |||
|TSSclassifier=W | |||
|UniProt=A8MTB9 | |||
|association_with_transcript=57bp_to_ENST00000451086_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_CEACAM18_5end | |||
|id=chr19:51981787..51981799,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.83e-13!4;CL:0002253!1.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.81e-09;3!CL:0002563;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.81e-09,3;CL:0002563,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!1.45e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001052!1.03e-28!4;UBERON:0000160!5.14e-28!27;UBERON:0005409!3.29e-27!35;UBERON:0004907!4.04e-23!5;UBERON:0000059!1.39e-18!11;UBERON:0001242!1.83e-13!4;UBERON:0001262!1.83e-13!4;UBERON:0004786!1.83e-13!4;UBERON:0004808!1.83e-13!4;UBERON:0001277!1.83e-13!4;UBERON:0003350!5.85e-11!5;UBERON:0001046!8.24e-11!19;UBERON:0004921!1.91e-08!129;UBERON:0004185!1.91e-08!129;UBERON:0002108!3.15e-08!14;UBERON:0001007!8.02e-07!155;UBERON:0001555!8.02e-07!155;UBERON:0007026!8.02e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.76e-49;17!UBERON:0002108;3.47e-45;4!UBERON:0005409;8.20e-39;22!UBERON:0004921;1.92e-21;33!UBERON:0000059;4.42e-10;11!UBERON:0001555;9.43e-10;54!UBERON:0002114;1.30e-09;2!UBERON:0001052;1.49e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0001007;2.37e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-49,17;UBERON:0002108,3.47e-45,4;UBERON:0005409,2.17e-34,25;UBERON:0004921,3.10e-10,118;UBERON:0000059,4.42e-10,11;UBERON:0002114,1.30e-09,2;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0001052,1.49e-07,4;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62528318967304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.565412285735763,0,0,13.2686346755009,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2108865325516,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.692466539139,8.08670373864642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CEACAM18 | |||
}} |
Revision as of 22:05, 11 September 2013
Short description: | p1@CEACAM18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CEACAM18_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 57bp_to_ENST00000451086_5end |
EntrezGene: | CEACAM18 |
HGNC: | 31949 |
UniProt: | A8MTB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.81e-09 | 3 |
intestinal epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.69e-49 | 17 |
small intestine | 3.47e-45 | 4 |
gastrointestinal system | 2.17e-34 | 25 |
subdivision of digestive tract | 3.10e-10 | 118 |
large intestine | 4.42e-10 | 11 |
duodenum | 1.30e-09 | 2 |
digestive system | 2.49e-08 | 145 |
digestive tract | 2.49e-08 | 145 |
primitive gut | 2.49e-08 | 145 |
rectum | 1.49e-07 | 4 |
endoderm-derived structure | 1.52e-07 | 160 |
endoderm | 1.52e-07 | 160 |
presumptive endoderm | 1.52e-07 | 160 |
intestinal mucosa | 1.80e-07 | 4 |
wall of intestine | 1.80e-07 | 4 |
gastrointestinal system mucosa | 1.80e-07 | 4 |
gastrointestinal system epithelium | 1.80e-07 | 4 |
intestinal epithelium | 1.80e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.