FFCP PHASE1:Hg19::chr2:219151278..219151317,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64114|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23410|TSSclassifier=W|UniProt=Q969X1|association_with_transcript=254bp_to_ENST00000444881,uc002vho.1_5end|coexpression_cluster_id=C8|description=CAGE_peak_13_at_TMBIM1_5end|id=chr2:219151278..219151317,-|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0002087!4.15e-18!119;CL:0000988!3.46e-17!182;CL:0000037!3.74e-17!172;CL:0000566!3.74e-17!172;CL:0002031!1.14e-16!124;CL:0002032!3.23e-15!165;CL:0000837!3.23e-15!165;CL:0002057!3.97e-15!42;CL:0000766!8.11e-14!76;CL:0000860!1.52e-13!45;CL:0000557!4.38e-11!71;CL:0002320!1.34e-10!365;CL:0000134!1.72e-10!358;CL:0000839!2.17e-10!70;CL:0002009!5.45e-10!65;CL:0000723!7.77e-10!436;CL:0000034!1.20e-09!444;CL:0002194!1.38e-09!63;CL:0000576!1.38e-09!63;CL:0000040!1.38e-09!63;CL:0000559!1.38e-09!63;CL:0000048!1.43e-09!430;CL:0002393!4.40e-09!9;CL:0002397!4.40e-09!9;CL:0000763!8.73e-09!112;CL:0000049!8.73e-09!112;CL:0000219!1.14e-08!390;CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18;CL:0000542!4.79e-07!53;CL:0000051!4.79e-07!53|ontology_enrichment_celltype_v019=CL:0000623;5.83e-25;3!CL:0000771;1.60e-16;2!CL:0000094;1.43e-15;8!CL:0000791;4.28e-15;18!CL:0000789;4.28e-15;18!CL:0002419;4.28e-15;18!CL:0000624;5.78e-12;6!CL:0002393;5.78e-12;6!CL:0002397;5.78e-12;6!CL:0000081;2.22e-11;11!CL:0000226;4.42e-11;3!CL:0000767;4.42e-11;3!CL:0000842;4.42e-11;3!CL:0000084;9.83e-11;25!CL:0000625;4.54e-07;11!CL:0000542;4.60e-07;53|ontology_enrichment_celltype_v019_2=CL:0000623,5.86e-25,3;CL:0000825,5.86e-25,3;CL:0000738,2.89e-21,136;CL:0000037,1.55e-16,168;CL:0000771,1.60e-16,2;CL:0000094,1.23e-15,8;CL:0000988,1.64e-15,177;CL:0000791,3.38e-15,18;CL:0000789,3.38e-15,18;CL:0002420,3.38e-15,18;CL:0002419,3.38e-15,18;CL:0000790,3.38e-15,18;CL:0002087,3.90e-14,115;CL:0002032,7.91e-14,161;CL:0000837,7.91e-14,161;CL:0000838,1.77e-13,52;CL:0000542,3.42e-13,53;CL:0000051,3.42e-13,53;CL:0000624,3.96e-12,6;CL:0002031,1.14e-11,120;CL:0000081,2.00e-11,11;CL:0000226,2.93e-11,3;CL:0000842,2.93e-11,3;CL:0000767,3.60e-11,3;CL:0000084,8.33e-11,25;CL:0000827,8.33e-11,25;CL:0002393,3.55e-08,9;CL:0002397,3.55e-08,9;CL:0000766,3.82e-07,72;CL:0000625,4.60e-07,11|ontology_enrichment_development_v019=CL:0000790;4.28e-15;18!CL:0000051;4.60e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.53e-13!102;UBERON:0003061!2.53e-13!102;UBERON:0002193!1.49e-11!112;UBERON:0002384!4.25e-10!375;UBERON:0002371!1.77e-09!80;UBERON:0001474!3.63e-08!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,1.18009283054671,1.91914699048606,0.619264493264304,0,0,0,0,0,0,0.553995408531877,1.40381113229099,1.51907609501096,0,0.32389366601898,0,0,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,1.0246428261164,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0.962787081228281,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0.211255286311942,1.27562579979026,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,1.17447437874188,0,0,1.68152568894461,0,1.180258620683,1.96505381374582,1.64481199199607,0.167186495390678,0,0.473447805734733,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0.766440987203842,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0,0,6.24980903996671,6.68600489458768,2.31719046212478,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.309157587715317,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,4.92663237895944,0,0.414656231081544,0,0.25248486685276,0.126995788584338,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,8.6693534488848,8.40947541952118,10.9091580837786,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,1.86091223510599,1.50999940573032,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23410 | |||
|TSSclassifier=W | |||
|UniProt=Q969X1 | |||
|association_with_transcript=254bp_to_ENST00000444881,uc002vho.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_13_at_TMBIM1_5end | |||
|id=chr2:219151278..219151317,- | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0002087!4.15e-18!119;CL:0000988!3.46e-17!182;CL:0000037!3.74e-17!172;CL:0000566!3.74e-17!172;CL:0002031!1.14e-16!124;CL:0002032!3.23e-15!165;CL:0000837!3.23e-15!165;CL:0002057!3.97e-15!42;CL:0000766!8.11e-14!76;CL:0000860!1.52e-13!45;CL:0000557!4.38e-11!71;CL:0002320!1.34e-10!365;CL:0000134!1.72e-10!358;CL:0000839!2.17e-10!70;CL:0002009!5.45e-10!65;CL:0000723!7.77e-10!436;CL:0000034!1.20e-09!444;CL:0002194!1.38e-09!63;CL:0000576!1.38e-09!63;CL:0000040!1.38e-09!63;CL:0000559!1.38e-09!63;CL:0000048!1.43e-09!430;CL:0002393!4.40e-09!9;CL:0002397!4.40e-09!9;CL:0000763!8.73e-09!112;CL:0000049!8.73e-09!112;CL:0000219!1.14e-08!390;CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18;CL:0000542!4.79e-07!53;CL:0000051!4.79e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.83e-25;3!CL:0000771;1.60e-16;2!CL:0000094;1.43e-15;8!CL:0000791;4.28e-15;18!CL:0000789;4.28e-15;18!CL:0002419;4.28e-15;18!CL:0000624;5.78e-12;6!CL:0002393;5.78e-12;6!CL:0002397;5.78e-12;6!CL:0000081;2.22e-11;11!CL:0000226;4.42e-11;3!CL:0000767;4.42e-11;3!CL:0000842;4.42e-11;3!CL:0000084;9.83e-11;25!CL:0000625;4.54e-07;11!CL:0000542;4.60e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.86e-25,3;CL:0000825,5.86e-25,3;CL:0000738,2.89e-21,136;CL:0000037,1.55e-16,168;CL:0000771,1.60e-16,2;CL:0000094,1.23e-15,8;CL:0000988,1.64e-15,177;CL:0000791,3.38e-15,18;CL:0000789,3.38e-15,18;CL:0002420,3.38e-15,18;CL:0002419,3.38e-15,18;CL:0000790,3.38e-15,18;CL:0002087,3.90e-14,115;CL:0002032,7.91e-14,161;CL:0000837,7.91e-14,161;CL:0000838,1.77e-13,52;CL:0000542,3.42e-13,53;CL:0000051,3.42e-13,53;CL:0000624,3.96e-12,6;CL:0002031,1.14e-11,120;CL:0000081,2.00e-11,11;CL:0000226,2.93e-11,3;CL:0000842,2.93e-11,3;CL:0000767,3.60e-11,3;CL:0000084,8.33e-11,25;CL:0000827,8.33e-11,25;CL:0002393,3.55e-08,9;CL:0002397,3.55e-08,9;CL:0000766,3.82e-07,72;CL:0000625,4.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.28e-15;18!CL:0000051;4.60e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.53e-13!102;UBERON:0003061!2.53e-13!102;UBERON:0002193!1.49e-11!112;UBERON:0002384!4.25e-10!375;UBERON:0002371!1.77e-09!80;UBERON:0001474!3.63e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@TMBIM1 | |||
}} |
Revision as of 16:49, 12 September 2013
Short description: | p13@TMBIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TMBIM1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 254bp_to_ENST00000444881, uc002vho.1_5end |
EntrezGene: | TMBIM1 |
HGNC: | 23410 |
UniProt: | Q969X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.86e-25 | 3 |
pro-NK cell | 5.86e-25 | 3 |
leukocyte | 2.89e-21 | 136 |
hematopoietic stem cell | 1.55e-16 | 168 |
eosinophil | 1.60e-16 | 2 |
granulocyte | 1.23e-15 | 8 |
hematopoietic cell | 1.64e-15 | 177 |
mature alpha-beta T cell | 3.38e-15 | 18 |
alpha-beta T cell | 3.38e-15 | 18 |
immature T cell | 3.38e-15 | 18 |
mature T cell | 3.38e-15 | 18 |
immature alpha-beta T cell | 3.38e-15 | 18 |
nongranular leukocyte | 3.90e-14 | 115 |
hematopoietic oligopotent progenitor cell | 7.91e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.91e-14 | 161 |
lymphoid lineage restricted progenitor cell | 1.77e-13 | 52 |
lymphocyte | 3.42e-13 | 53 |
common lymphoid progenitor | 3.42e-13 | 53 |
CD4-positive, alpha-beta T cell | 3.96e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
blood cell | 2.00e-11 | 11 |
single nucleate cell | 2.93e-11 | 3 |
mononuclear cell | 2.93e-11 | 3 |
basophil | 3.60e-11 | 3 |
T cell | 8.33e-11 | 25 |
pro-T cell | 8.33e-11 | 25 |
intermediate monocyte | 3.55e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.55e-08 | 9 |
myeloid leukocyte | 3.82e-07 | 72 |
CD8-positive, alpha-beta T cell | 4.60e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.