FFCP PHASE1:Hg19::chr2:238233011..238233027,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:238233011..238233027,-|id=chr2:238233011..238233027,-|ontology_enrichment_celltype=CL:0000055!1.50e-37!180;CL:0000057!4.04e-28!75;CL:0000183!3.95e-17!59;CL:0000680!9.11e-17!57;CL:0000056!9.11e-17!57;CL:0000355!9.11e-17!57;CL:0000187!2.81e-16!54;CL:0002620!8.49e-15!23;CL:0000048!8.74e-14!430;CL:0000393!2.17e-13!60;CL:0000211!2.17e-13!60;CL:0000723!4.98e-13!436;CL:0000034!4.60e-12!444;CL:0000192!7.71e-11!42;CL:0000514!7.71e-11!42;CL:0000188!3.11e-08!9;CL:0002371!9.65e-08!591|ontology_enrichment_celltype_v019=CL:1000487;5.45e-07;2|ontology_enrichment_celltype_v019_2=CL:0000057,4.27e-13,76;CL:0000187,4.32e-07,55;CL:0002549,6.38e-07,2;CL:1000487,6.38e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:3307,4.87e-07,2|ontology_enrichment_uberon=UBERON:0000914!6.64e-19!83;UBERON:0002329!6.64e-19!83;UBERON:0003077!6.64e-19!83;UBERON:0003059!6.64e-19!83;UBERON:0007282!6.64e-19!83;UBERON:0009618!6.64e-19!83;UBERON:0007285!6.64e-19!83;UBERON:0004290!1.16e-17!70;UBERON:0002385!7.48e-15!63;UBERON:0001015!7.48e-15!63;UBERON:0000383!7.48e-15!63;UBERON:0001134!8.60e-15!61;UBERON:0002036!8.60e-15!61;UBERON:0003082!8.60e-15!61;UBERON:0000486!1.72e-14!82;UBERON:0005256!1.95e-11!143;UBERON:0003102!6.78e-10!95;UBERON:0002199!6.90e-09!45;UBERON:0002416!6.90e-09!45;UBERON:0002097!5.18e-08!40;UBERON:0002100!1.81e-07!216;UBERON:0002384!3.49e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0005629,6.38e-07,2;UBERON:0005358,6.38e-07,2;UBERON:0001886,6.38e-07,2;UBERON:0004086,6.38e-07,2;UBERON:0005282,6.38e-07,2;UBERON:0005281,6.38e-07,2|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0.495065411840187,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.53007406669196,0,0.869079113764942,0.795285947051099,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.397227542439656,2.29469296599051,0,0,0,0.24666754841716,0,0.134710672069688,0.817309515567294,1.51357427644931,1.72852777344,0,0.624320153660641,0.570471821544449,1.04614076386261,0.352303495931295,0.323745888736263,0.421352420106746,0.61246251376468,0.61417158655884,0.619954687054593,1.18800285728205,1.48360157567134,0.910161361938026,0,0.336672227908132,0.375355559615893,0,3.07284334616587,1.22595118319608,0.600952235626387,0.226864366320042,5.56107870635472,0.213557388818567,0.635795703478686,3.00091096084402,0.515262646192195,1.8034837803194,0.18611685633159,2.19409231913646,0.487185025805993,2.01947019395292,0.368199594569197,0,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0,0.387815147273333,0,3.381211010224,0.797814349754612,0,0,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,1.35632511849868,0.623912584592421,0.713715955188647,0.157702415033935,0.585707074963566,0.902838299183157,0,0,0,0.368738337083406,0.260650843404249,0.783204629850962,2.74514739048685,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0,0.321707842287215,0,1.69630663182921,1.24293207719189,0.410635780069046,1.03850885836724,1.27831416305955,0,0,0,0.229628896329213,1.82091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,1.07834031980251,1.38153307253517,0.275673144969061,0.859361958946189,1.59518363305651,0.340906509664404,0.623224249527161,0,0,0,0,0,4.7221852024596,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0.632758849437452,0.190630193923825,0.767693373934002,2.1396949401696,0.318203247925937,0,0.899362287916574,0.274537029736055,0.235624804691373,0,0,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,1.36499911407986,2.12108147930569,0,0.551365343546124,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0.354761064070598,0.633322905892992,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:238233011..238233027,- | |||
|id=chr2:238233011..238233027,- | |||
|ontology_enrichment_celltype=CL:0000055!1.50e-37!180;CL:0000057!4.04e-28!75;CL:0000183!3.95e-17!59;CL:0000680!9.11e-17!57;CL:0000056!9.11e-17!57;CL:0000355!9.11e-17!57;CL:0000187!2.81e-16!54;CL:0002620!8.49e-15!23;CL:0000048!8.74e-14!430;CL:0000393!2.17e-13!60;CL:0000211!2.17e-13!60;CL:0000723!4.98e-13!436;CL:0000034!4.60e-12!444;CL:0000192!7.71e-11!42;CL:0000514!7.71e-11!42;CL:0000188!3.11e-08!9;CL:0002371!9.65e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:1000487;5.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.27e-13,76;CL:0000187,4.32e-07,55;CL:0002549,6.38e-07,2;CL:1000487,6.38e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.64e-19!83;UBERON:0002329!6.64e-19!83;UBERON:0003077!6.64e-19!83;UBERON:0003059!6.64e-19!83;UBERON:0007282!6.64e-19!83;UBERON:0009618!6.64e-19!83;UBERON:0007285!6.64e-19!83;UBERON:0004290!1.16e-17!70;UBERON:0002385!7.48e-15!63;UBERON:0001015!7.48e-15!63;UBERON:0000383!7.48e-15!63;UBERON:0001134!8.60e-15!61;UBERON:0002036!8.60e-15!61;UBERON:0003082!8.60e-15!61;UBERON:0000486!1.72e-14!82;UBERON:0005256!1.95e-11!143;UBERON:0003102!6.78e-10!95;UBERON:0002199!6.90e-09!45;UBERON:0002416!6.90e-09!45;UBERON:0002097!5.18e-08!40;UBERON:0002100!1.81e-07!216;UBERON:0002384!3.49e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,6.38e-07,2;UBERON:0005358,6.38e-07,2;UBERON:0001886,6.38e-07,2;UBERON:0004086,6.38e-07,2;UBERON:0005282,6.38e-07,2;UBERON:0005281,6.38e-07,2 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0.495065411840187,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.53007406669196,0,0.869079113764942,0.795285947051099,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.397227542439656,2.29469296599051,0,0,0,0.24666754841716,0,0.134710672069688,0.817309515567294,1.51357427644931,1.72852777344,0,0.624320153660641,0.570471821544449,1.04614076386261,0.352303495931295,0.323745888736263,0.421352420106746,0.61246251376468,0.61417158655884,0.619954687054593,1.18800285728205,1.48360157567134,0.910161361938026,0,0.336672227908132,0.375355559615893,0,3.07284334616587,1.22595118319608,0.600952235626387,0.226864366320042,5.56107870635472,0.213557388818567,0.635795703478686,3.00091096084402,0.515262646192195,1.8034837803194,0.18611685633159,2.19409231913646,0.487185025805993,2.01947019395292,0.368199594569197,0,2.13005755509969,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0,0.387815147273333,0,3.381211010224,0.797814349754612,0,0,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,1.35632511849868,0.623912584592421,0.713715955188647,0.157702415033935,0.585707074963566,0.902838299183157,0,0,0,0.368738337083406,0.260650843404249,0.783204629850962,2.74514739048685,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0,0.321707842287215,0,1.69630663182921,1.24293207719189,0.410635780069046,1.03850885836724,1.27831416305955,0,0,0,0.229628896329213,1.82091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,1.07834031980251,1.38153307253517,0.275673144969061,0.859361958946189,1.59518363305651,0.340906509664404,0.623224249527161,0,0,0,0,0,4.7221852024596,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0.632758849437452,0.190630193923825,0.767693373934002,2.1396949401696,0.318203247925937,0,0.899362287916574,0.274537029736055,0.235624804691373,0,0,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,1.36499911407986,2.12108147930569,0,0.551365343546124,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0.354761064070598,0.633322905892992,0.329294892959902,0.75894634753143,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0,0,0.451961481561065,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,3.58936512288407,0.199679000498991,0,0.446342914883745,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0.895528817321244,2.80455971816669,0.554805861502613,0.378806010550178,2.26411111577318,2.66943366478961,0.228840068396924,1.20984739010591,0.310874401165561,0.295710299979268,0.477890301491107,0,0.931577741257556,0.414706207840855,1.59505028734797,0.521745061811734,0,0,0.406870733204662,0.727394636810238,0,0,0.796191777397232,0,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0,0,0.694567422971502,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0.198916222116275,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,1.37190407549935,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,2.03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| |||
|short_description=p@chr2:238233011..238233027,- | |||
}} |
Revision as of 17:36, 12 September 2013
Short description: | p@chr2:238233011..238233027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238233011..238233027, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.27e-13 | 76 |
muscle cell | 4.32e-07 | 55 |
fibroblast of choroid plexus | 6.38e-07 | 2 |
smooth muscle cell of prostate | 6.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 6.38e-07 | 2 |
ventricle of nervous system | 6.38e-07 | 2 |
choroid plexus | 6.38e-07 | 2 |
brain ventricle | 6.38e-07 | 2 |
ventricular system of brain | 6.38e-07 | 2 |
ventricular system of central nervous system | 6.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.87e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.