FFCP PHASE1:Hg19::chr2:238499280..238499287,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64284|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16523|TSSclassifier=S|UniProt=B8ZZM5|association_with_transcript=15bp_to_ENST00000409576_5end|coexpression_cluster_id=C211|description=CAGE_peak_7_at_RAB17_5end|id=chr2:238499280..238499287,-|ontology_enrichment_celltype=CL:0000181!7.36e-16!12;CL:0000417!7.36e-16!12;CL:0000668!7.36e-16!12;CL:0000414!7.36e-16!12;CL:0000412!7.36e-16!12;CL:0000182!7.36e-16!12|ontology_enrichment_celltype_v019=CL:0000182;7.91e-21;12|ontology_enrichment_celltype_v019_2=CL:0000182,7.33e-21,12|ontology_enrichment_development_v019=UBERON:0004161;4.11e-13;11!UBERON:0009497;3.44e-11;13!UBERON:0003104;2.03e-08;31|ontology_enrichment_disease=DOID:1909!2.81e-11!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0008835!2.36e-18!22;UBERON:0003894!2.36e-18!22;UBERON:0009854!1.74e-17!23;UBERON:0002107!3.54e-17!19;UBERON:0006925!3.54e-17!19;UBERON:0008836!3.54e-17!19;UBERON:0007499!5.85e-16!25;UBERON:0009497!5.85e-16!25;UBERON:0000015!5.85e-16!25;UBERON:0002423!5.85e-16!25;UBERON:0006235!5.85e-16!25;UBERON:0004161!5.85e-16!25;UBERON:0009856!2.77e-15!26;UBERON:0005057!3.33e-12!26;UBERON:0003929!1.06e-11!54;UBERON:0002368!6.36e-11!35;UBERON:0002365!4.99e-10!31;UBERON:0002330!4.99e-10!31;UBERON:0004921!3.18e-09!129;UBERON:0004185!3.18e-09!129;UBERON:0000949!3.78e-08!45;UBERON:0001007!5.18e-08!155;UBERON:0001555!5.18e-08!155;UBERON:0007026!5.18e-08!155;UBERON:0005172!5.41e-08!55;UBERON:0005173!5.41e-08!55;UBERON:0002530!3.13e-07!59;UBERON:0002417!4.98e-07!61;UBERON:0000916!4.98e-07!61;UBERON:0004119!5.03e-07!169;UBERON:0000925!5.03e-07!169;UBERON:0006595!5.03e-07!169;UBERON:0005911!6.68e-07!82|ontology_enrichment_uberon_v019=UBERON:0002107;7.96e-29;19!UBERON:0006925;7.96e-29;19!UBERON:0002423;6.91e-22;25!UBERON:0002365;1.12e-17;31!UBERON:0002330;1.12e-17;31!UBERON:0002368;1.09e-14;33!UBERON:0000160;6.18e-14;17!UBERON:0002108;2.03e-13;4!UBERON:0000949;3.48e-11;43!UBERON:0005409;5.66e-11;22!UBERON:0005172;7.39e-10;52!UBERON:0005173;7.39e-10;52!UBERON:0001007;1.53e-09;81!UBERON:0001155;1.16e-07;9!UBERON:0004921;1.78e-07;33!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.16e-29,19;UBERON:0006925,8.16e-29,19;UBERON:0008836,8.16e-29,19;UBERON:0008835,7.09e-25,22;UBERON:0003894,7.09e-25,22;UBERON:0009854,8.63e-24,23;UBERON:0007499,7.04e-22,25;UBERON:0009497,7.04e-22,25;UBERON:0000015,7.04e-22,25;UBERON:0002423,7.04e-22,25;UBERON:0006235,7.04e-22,25;UBERON:0004161,7.04e-22,25;UBERON:0009856,4.94e-21,26;UBERON:0002365,1.28e-17,31;UBERON:0002330,1.28e-17,31;UBERON:0002368,1.38e-15,35;UBERON:0000160,6.95e-14,17;UBERON:0005172,1.70e-13,54;UBERON:0005173,1.70e-13,54;UBERON:0002108,1.97e-13,4;UBERON:0002417,4.21e-12,60;UBERON:0000916,4.21e-12,60;UBERON:0000949,4.46e-12,45;UBERON:0004921,5.93e-12,118;UBERON:0003929,5.04e-10,54;UBERON:0005409,1.05e-09,25;UBERON:0001007,1.46e-09,145;UBERON:0001555,1.46e-09,145;UBERON:0007026,1.46e-09,145;UBERON:0002530,3.75e-09,59;UBERON:0004119,1.42e-08,160;UBERON:0000925,1.42e-08,160;UBERON:0006595,1.42e-08,160;UBERON:0001155,1.33e-07,9;UBERON:0005177,5.50e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,4.91413608338813,2.36315962672562,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.741742725430498,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,1.33969702408637,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.17241786942466,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16523 | |||
|TSSclassifier=S | |||
|UniProt=B8ZZM5 | |||
|association_with_transcript=15bp_to_ENST00000409576_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_7_at_RAB17_5end | |||
|id=chr2:238499280..238499287,- | |||
|ontology_enrichment_celltype=CL:0000181!7.36e-16!12;CL:0000417!7.36e-16!12;CL:0000668!7.36e-16!12;CL:0000414!7.36e-16!12;CL:0000412!7.36e-16!12;CL:0000182!7.36e-16!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.91e-21;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.33e-21,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.11e-13;11!UBERON:0009497;3.44e-11;13!UBERON:0003104;2.03e-08;31 | |||
|ontology_enrichment_disease=DOID:1909!2.81e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!2.36e-18!22;UBERON:0003894!2.36e-18!22;UBERON:0009854!1.74e-17!23;UBERON:0002107!3.54e-17!19;UBERON:0006925!3.54e-17!19;UBERON:0008836!3.54e-17!19;UBERON:0007499!5.85e-16!25;UBERON:0009497!5.85e-16!25;UBERON:0000015!5.85e-16!25;UBERON:0002423!5.85e-16!25;UBERON:0006235!5.85e-16!25;UBERON:0004161!5.85e-16!25;UBERON:0009856!2.77e-15!26;UBERON:0005057!3.33e-12!26;UBERON:0003929!1.06e-11!54;UBERON:0002368!6.36e-11!35;UBERON:0002365!4.99e-10!31;UBERON:0002330!4.99e-10!31;UBERON:0004921!3.18e-09!129;UBERON:0004185!3.18e-09!129;UBERON:0000949!3.78e-08!45;UBERON:0001007!5.18e-08!155;UBERON:0001555!5.18e-08!155;UBERON:0007026!5.18e-08!155;UBERON:0005172!5.41e-08!55;UBERON:0005173!5.41e-08!55;UBERON:0002530!3.13e-07!59;UBERON:0002417!4.98e-07!61;UBERON:0000916!4.98e-07!61;UBERON:0004119!5.03e-07!169;UBERON:0000925!5.03e-07!169;UBERON:0006595!5.03e-07!169;UBERON:0005911!6.68e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.96e-29;19!UBERON:0006925;7.96e-29;19!UBERON:0002423;6.91e-22;25!UBERON:0002365;1.12e-17;31!UBERON:0002330;1.12e-17;31!UBERON:0002368;1.09e-14;33!UBERON:0000160;6.18e-14;17!UBERON:0002108;2.03e-13;4!UBERON:0000949;3.48e-11;43!UBERON:0005409;5.66e-11;22!UBERON:0005172;7.39e-10;52!UBERON:0005173;7.39e-10;52!UBERON:0001007;1.53e-09;81!UBERON:0001155;1.16e-07;9!UBERON:0004921;1.78e-07;33!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.16e-29,19;UBERON:0006925,8.16e-29,19;UBERON:0008836,8.16e-29,19;UBERON:0008835,7.09e-25,22;UBERON:0003894,7.09e-25,22;UBERON:0009854,8.63e-24,23;UBERON:0007499,7.04e-22,25;UBERON:0009497,7.04e-22,25;UBERON:0000015,7.04e-22,25;UBERON:0002423,7.04e-22,25;UBERON:0006235,7.04e-22,25;UBERON:0004161,7.04e-22,25;UBERON:0009856,4.94e-21,26;UBERON:0002365,1.28e-17,31;UBERON:0002330,1.28e-17,31;UBERON:0002368,1.38e-15,35;UBERON:0000160,6.95e-14,17;UBERON:0005172,1.70e-13,54;UBERON:0005173,1.70e-13,54;UBERON:0002108,1.97e-13,4;UBERON:0002417,4.21e-12,60;UBERON:0000916,4.21e-12,60;UBERON:0000949,4.46e-12,45;UBERON:0004921,5.93e-12,118;UBERON:0003929,5.04e-10,54;UBERON:0005409,1.05e-09,25;UBERON:0001007,1.46e-09,145;UBERON:0001555,1.46e-09,145;UBERON:0007026,1.46e-09,145;UBERON:0002530,3.75e-09,59;UBERON:0004119,1.42e-08,160;UBERON:0000925,1.42e-08,160;UBERON:0006595,1.42e-08,160;UBERON:0001155,1.33e-07,9;UBERON:0005177,5.50e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,4.91413608338813,2.36315962672562,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.741742725430498,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,1.33969702408637,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.17241786942466,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,4.70762364458462,2.84127428655144,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@RAB17 | |||
}} |
Revision as of 17:38, 12 September 2013
Short description: | p7@RAB17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RAB17_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 15bp_to_ENST00000409576_5end |
EntrezGene: | RAB17 |
HGNC: | 16523 |
UniProt: | B8ZZM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.33e-21 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.16e-29 | 19 |
digestive gland | 8.16e-29 | 19 |
liver bud | 8.16e-29 | 19 |
hepatic diverticulum | 7.09e-25 | 22 |
liver primordium | 7.09e-25 | 22 |
digestive tract diverticulum | 8.63e-24 | 23 |
epithelial sac | 7.04e-22 | 25 |
epithelium of foregut-midgut junction | 7.04e-22 | 25 |
anatomical boundary | 7.04e-22 | 25 |
hepatobiliary system | 7.04e-22 | 25 |
foregut-midgut junction | 7.04e-22 | 25 |
septum transversum | 7.04e-22 | 25 |
sac | 4.94e-21 | 26 |
exocrine gland | 1.28e-17 | 31 |
exocrine system | 1.28e-17 | 31 |
endocrine gland | 1.38e-15 | 35 |
intestine | 6.95e-14 | 17 |
abdomen element | 1.70e-13 | 54 |
abdominal segment element | 1.70e-13 | 54 |
small intestine | 1.97e-13 | 4 |
abdominal segment of trunk | 4.21e-12 | 60 |
abdomen | 4.21e-12 | 60 |
endocrine system | 4.46e-12 | 45 |
subdivision of digestive tract | 5.93e-12 | 118 |
gut epithelium | 5.04e-10 | 54 |
gastrointestinal system | 1.05e-09 | 25 |
digestive system | 1.46e-09 | 145 |
digestive tract | 1.46e-09 | 145 |
primitive gut | 1.46e-09 | 145 |
gland | 3.75e-09 | 59 |
endoderm-derived structure | 1.42e-08 | 160 |
endoderm | 1.42e-08 | 160 |
presumptive endoderm | 1.42e-08 | 160 |
colon | 1.33e-07 | 9 |
trunk region element | 5.50e-07 | 101 |
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