FFCP PHASE1:Hg19::chr20:19866879..19866890,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54453|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18750|TSSclassifier=N|UniProt=Q8WYP3|association_with_transcript=-274bp_to_ENST00000255006,NM_001242581_5end|description=CAGE_peak_24_at_RIN2_5end|id=chr20:19866879..19866890,+|ontology_enrichment_celltype=CL:0002139!1.75e-10!24;CL:0000071!8.15e-10!18;CL:0002546!8.15e-10!18|ontology_enrichment_celltype_v019=CL:0002379;2.71e-19;1!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002379,3.25e-19,1;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;2.71e-19;1!DOID:3565;2.71e-19;1!DOID:4929;2.48e-10;2|ontology_enrichment_disease_v019_2=DOID:3620,3.25e-19,1;DOID:3565,3.25e-19,1;DOID:4929,2.49e-10,2|ontology_enrichment_uberon=UBERON:0001049!9.09e-32!57;UBERON:0005068!9.09e-32!57;UBERON:0006241!9.09e-32!57;UBERON:0007135!9.09e-32!57;UBERON:0002616!2.85e-28!59;UBERON:0000955!4.34e-26!69;UBERON:0006238!4.34e-26!69;UBERON:0003075!9.30e-25!86;UBERON:0007284!9.30e-25!86;UBERON:0007023!2.83e-24!115;UBERON:0005743!4.77e-24!86;UBERON:0001017!4.94e-24!82;UBERON:0002780!7.54e-24!41;UBERON:0001890!7.54e-24!41;UBERON:0006240!7.54e-24!41;UBERON:0002346!3.00e-23!90;UBERON:0003080!3.78e-23!42;UBERON:0002020!1.40e-21!34;UBERON:0003528!1.40e-21!34;UBERON:0001893!1.91e-21!34;UBERON:0000073!6.09e-21!94;UBERON:0001016!6.09e-21!94;UBERON:0002791!7.14e-20!33;UBERON:0001869!3.25e-18!32;UBERON:0003056!2.52e-17!61;UBERON:0000025!2.81e-16!194;UBERON:0002619!4.66e-16!22;UBERON:0000033!2.47e-15!123;UBERON:0001950!3.54e-15!20;UBERON:0002298!4.92e-15!8;UBERON:0004111!7.19e-15!241;UBERON:0000153!3.27e-14!129;UBERON:0007811!3.27e-14!129;UBERON:0000956!7.86e-14!25;UBERON:0000203!7.86e-14!25;UBERON:0000477!5.28e-12!286;UBERON:0004121!3.32e-11!169;UBERON:0000924!9.76e-11!173;UBERON:0006601!9.76e-11!173;UBERON:0000200!2.06e-10!6;UBERON:0000483!2.66e-10!309;UBERON:0000119!4.43e-10!312;UBERON:0001986!8.15e-10!18;UBERON:0004638!8.15e-10!18;UBERON:0004852!8.15e-10!18;UBERON:0004733!9.78e-10!12;UBERON:0002028!9.78e-10!12;UBERON:0007277!9.78e-10!12;UBERON:0003076!1.09e-09!15;UBERON:0003057!1.09e-09!15;UBERON:0002308!1.17e-09!9;UBERON:0000125!1.17e-09!9;UBERON:0001896!5.97e-09!3;UBERON:0005290!5.97e-09!3;UBERON:0010096!5.97e-09!3;UBERON:0004732!6.72e-09!13;UBERON:0002771!1.87e-08!3;UBERON:0001871!2.66e-08!7;UBERON:0000988!3.09e-08!3;UBERON:0006331!4.17e-08!3;UBERON:0000487!1.03e-07!22;UBERON:0002420!5.89e-07!9;UBERON:0007245!5.89e-07!9;UBERON:0010009!5.89e-07!9;UBERON:0010011!5.89e-07!9;UBERON:0000454!5.89e-07!9|ontology_enrichment_uberon_v019=UBERON:0001871;2.98e-11;6!UBERON:0001876;2.48e-10;2!UBERON:0001897;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002420;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001871,3.85e-11,6;UBERON:0001875,1.72e-10,2;UBERON:0006514,1.72e-10,2;UBERON:0001897,2.07e-10,2;UBERON:0010225,2.07e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0002420,5.64e-09,9;UBERON:0007245,5.64e-09,9;UBERON:0010009,5.64e-09,9;UBERON:0010011,5.64e-09,9;UBERON:0000454,5.64e-09,9;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,4.56365690593914,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |||
|TSSclassifier=N | |||
|UniProt=Q8WYP3 | |||
|association_with_transcript=-274bp_to_ENST00000255006,NM_001242581_5end | |||
|description=CAGE_peak_24_at_RIN2_5end | |||
|id=chr20:19866879..19866890,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.75e-10!24;CL:0000071!8.15e-10!18;CL:0002546!8.15e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0002379;2.71e-19;1!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,3.25e-19,1;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.71e-19;1!DOID:3565;2.71e-19;1!DOID:4929;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.25e-19,1;DOID:3565,3.25e-19,1;DOID:4929,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.09e-32!57;UBERON:0005068!9.09e-32!57;UBERON:0006241!9.09e-32!57;UBERON:0007135!9.09e-32!57;UBERON:0002616!2.85e-28!59;UBERON:0000955!4.34e-26!69;UBERON:0006238!4.34e-26!69;UBERON:0003075!9.30e-25!86;UBERON:0007284!9.30e-25!86;UBERON:0007023!2.83e-24!115;UBERON:0005743!4.77e-24!86;UBERON:0001017!4.94e-24!82;UBERON:0002780!7.54e-24!41;UBERON:0001890!7.54e-24!41;UBERON:0006240!7.54e-24!41;UBERON:0002346!3.00e-23!90;UBERON:0003080!3.78e-23!42;UBERON:0002020!1.40e-21!34;UBERON:0003528!1.40e-21!34;UBERON:0001893!1.91e-21!34;UBERON:0000073!6.09e-21!94;UBERON:0001016!6.09e-21!94;UBERON:0002791!7.14e-20!33;UBERON:0001869!3.25e-18!32;UBERON:0003056!2.52e-17!61;UBERON:0000025!2.81e-16!194;UBERON:0002619!4.66e-16!22;UBERON:0000033!2.47e-15!123;UBERON:0001950!3.54e-15!20;UBERON:0002298!4.92e-15!8;UBERON:0004111!7.19e-15!241;UBERON:0000153!3.27e-14!129;UBERON:0007811!3.27e-14!129;UBERON:0000956!7.86e-14!25;UBERON:0000203!7.86e-14!25;UBERON:0000477!5.28e-12!286;UBERON:0004121!3.32e-11!169;UBERON:0000924!9.76e-11!173;UBERON:0006601!9.76e-11!173;UBERON:0000200!2.06e-10!6;UBERON:0000483!2.66e-10!309;UBERON:0000119!4.43e-10!312;UBERON:0001986!8.15e-10!18;UBERON:0004638!8.15e-10!18;UBERON:0004852!8.15e-10!18;UBERON:0004733!9.78e-10!12;UBERON:0002028!9.78e-10!12;UBERON:0007277!9.78e-10!12;UBERON:0003076!1.09e-09!15;UBERON:0003057!1.09e-09!15;UBERON:0002308!1.17e-09!9;UBERON:0000125!1.17e-09!9;UBERON:0001896!5.97e-09!3;UBERON:0005290!5.97e-09!3;UBERON:0010096!5.97e-09!3;UBERON:0004732!6.72e-09!13;UBERON:0002771!1.87e-08!3;UBERON:0001871!2.66e-08!7;UBERON:0000988!3.09e-08!3;UBERON:0006331!4.17e-08!3;UBERON:0000487!1.03e-07!22;UBERON:0002420!5.89e-07!9;UBERON:0007245!5.89e-07!9;UBERON:0010009!5.89e-07!9;UBERON:0010011!5.89e-07!9;UBERON:0000454!5.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;2.98e-11;6!UBERON:0001876;2.48e-10;2!UBERON:0001897;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002420;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,3.85e-11,6;UBERON:0001875,1.72e-10,2;UBERON:0006514,1.72e-10,2;UBERON:0001897,2.07e-10,2;UBERON:0010225,2.07e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0002420,5.64e-09,9;UBERON:0007245,5.64e-09,9;UBERON:0010009,5.64e-09,9;UBERON:0010011,5.64e-09,9;UBERON:0000454,5.64e-09,9;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41 | |||
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|short_description=p24@RIN2 | |||
}} |
Revision as of 07:40, 12 September 2013
Short description: | p24@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -274bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 3.25e-19 | 1 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 3.85e-11 | 6 |
globus pallidus | 1.72e-10 | 2 |
pallidum | 1.72e-10 | 2 |
dorsal plus ventral thalamus | 2.07e-10 | 2 |
thalamic complex | 2.07e-10 | 2 |
amygdala | 3.27e-10 | 2 |
basal ganglion | 5.64e-09 | 9 |
nuclear complex of neuraxis | 5.64e-09 | 9 |
aggregate regional part of brain | 5.64e-09 | 9 |
collection of basal ganglia | 5.64e-09 | 9 |
cerebral subcortex | 5.64e-09 | 9 |
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |
regional part of forebrain | 3.48e-07 | 41 |
forebrain | 3.48e-07 | 41 |
anterior neural tube | 3.48e-07 | 41 |
future forebrain | 3.48e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.25e-19 | 1 |
meningioma | 3.25e-19 | 1 |
tubular adenocarcinoma | 2.49e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.