FFCP PHASE1:Hg19::chr22:23744701..23744722,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=26461|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_ENST00000255890_5end|coexpression_cluster_id=C15|description=CAGE_peak_2_at_ZDHHC8P1_5end|id=chr22:23744701..23744722,-|ontology_enrichment_celltype=CL:0000066!2.07e-10!254;CL:0000077!1.12e-09!19|ontology_enrichment_celltype_v019=CL:0002577;3.19e-10;3!CL:0002586;7.38e-09;3!CL:0000349;1.44e-08;19!CL:0000077;4.27e-08;19!CL:0000149;9.86e-07;4|ontology_enrichment_celltype_v019_2=CL:0002577,3.12e-10,3;CL:0002586,3.58e-09,3;CL:0000349,1.24e-08,19;CL:0000077,2.97e-08,19;CL:0000149,5.79e-07,4|ontology_enrichment_development_v019=UBERON:0003918;4.99e-07;10!UBERON:0007687;4.99e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.17e-21!57;UBERON:0005068!2.17e-21!57;UBERON:0006241!2.17e-21!57;UBERON:0007135!2.17e-21!57;UBERON:0002616!3.79e-18!59;UBERON:0003075!3.48e-17!86;UBERON:0007284!3.48e-17!86;UBERON:0005743!5.97e-17!86;UBERON:0003080!3.60e-16!42;UBERON:0000955!9.50e-16!69;UBERON:0006238!9.50e-16!69;UBERON:0002346!1.22e-15!90;UBERON:0002780!2.08e-15!41;UBERON:0001890!2.08e-15!41;UBERON:0006240!2.08e-15!41;UBERON:0007023!3.48e-15!115;UBERON:0003056!1.40e-14!61;UBERON:0001017!1.65e-14!82;UBERON:0000073!9.71e-14!94;UBERON:0001016!9.71e-14!94;UBERON:0002020!5.80e-13!34;UBERON:0003528!5.80e-13!34;UBERON:0001869!7.34e-13!32;UBERON:0001893!1.53e-12!34;UBERON:0002791!5.82e-12!33;UBERON:0004121!1.57e-11!169;UBERON:0002619!1.98e-11!22;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0000924!8.86e-11!173;UBERON:0006601!8.86e-11!173;UBERON:0000033!1.36e-10!123;UBERON:0000153!2.98e-10!129;UBERON:0007811!2.98e-10!129;UBERON:0001950!3.59e-10!20;UBERON:0000062!5.70e-10!511;UBERON:0000064!5.93e-10!219;UBERON:0005631!1.19e-09!14;UBERON:0000158!1.19e-09!14;UBERON:0003124!9.27e-08!7|ontology_enrichment_uberon_v019=UBERON:0001987;9.45e-13;4!UBERON:0001781;7.38e-09;3!UBERON:0001782;7.38e-09;3!UBERON:0000478;3.38e-08;24!UBERON:0005631;8.43e-07;10!UBERON:0000158;8.43e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.59e-15,14;UBERON:0000158,1.59e-15,14;UBERON:0003124,5.42e-15,7;UBERON:0001987,7.90e-13,4;UBERON:0004340,7.90e-13,4;UBERON:0001782,3.58e-09,3;UBERON:0005424,3.58e-09,3;UBERON:0000478,2.84e-08,24;UBERON:0004175,1.43e-07,25;UBERON:0006554,2.32e-07,47;UBERON:0001008,3.79e-07,48;UBERON:0005156,4.35e-07,59;UBERON:0000990,4.35e-07,59;UBERON:0005795,5.00e-07,22;UBERON:0003133,5.03e-07,48;UBERON:0001781,5.79e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.79120467188971,1.52908960491121,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.408001382488506,1.56727360739044,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.523916301990851,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0.243947412259191,0.132529768321485,0.232387885739037,1.34759371519982,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.737930631258681,0.343135620597051,0.878002283269004,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,1.51183915378974,0,0.179117045405697,0.581267877027924,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,1.80863626235752,2.61460037580088,7.99783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0,0,0,0,12.4282304292966,8.32177197552485,9.07170879989041,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,1.40354529212299,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,5.576248976895,1.62689197332152,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,1.53135254993501,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,1.08890984861323,0.659006605437454,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,4.70025912960882,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0.593929361665277,3.37876772309155,0,0.703347082052564,0,0,27.0240522403832,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,0,7.78393999966142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26461 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000255890_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_2_at_ZDHHC8P1_5end | |||
|id=chr22:23744701..23744722,- | |||
|ontology_enrichment_celltype=CL:0000066!2.07e-10!254;CL:0000077!1.12e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.19e-10;3!CL:0002586;7.38e-09;3!CL:0000349;1.44e-08;19!CL:0000077;4.27e-08;19!CL:0000149;9.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.12e-10,3;CL:0002586,3.58e-09,3;CL:0000349,1.24e-08,19;CL:0000077,2.97e-08,19;CL:0000149,5.79e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.99e-07;10!UBERON:0007687;4.99e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-21!57;UBERON:0005068!2.17e-21!57;UBERON:0006241!2.17e-21!57;UBERON:0007135!2.17e-21!57;UBERON:0002616!3.79e-18!59;UBERON:0003075!3.48e-17!86;UBERON:0007284!3.48e-17!86;UBERON:0005743!5.97e-17!86;UBERON:0003080!3.60e-16!42;UBERON:0000955!9.50e-16!69;UBERON:0006238!9.50e-16!69;UBERON:0002346!1.22e-15!90;UBERON:0002780!2.08e-15!41;UBERON:0001890!2.08e-15!41;UBERON:0006240!2.08e-15!41;UBERON:0007023!3.48e-15!115;UBERON:0003056!1.40e-14!61;UBERON:0001017!1.65e-14!82;UBERON:0000073!9.71e-14!94;UBERON:0001016!9.71e-14!94;UBERON:0002020!5.80e-13!34;UBERON:0003528!5.80e-13!34;UBERON:0001869!7.34e-13!32;UBERON:0001893!1.53e-12!34;UBERON:0002791!5.82e-12!33;UBERON:0004121!1.57e-11!169;UBERON:0002619!1.98e-11!22;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0000924!8.86e-11!173;UBERON:0006601!8.86e-11!173;UBERON:0000033!1.36e-10!123;UBERON:0000153!2.98e-10!129;UBERON:0007811!2.98e-10!129;UBERON:0001950!3.59e-10!20;UBERON:0000062!5.70e-10!511;UBERON:0000064!5.93e-10!219;UBERON:0005631!1.19e-09!14;UBERON:0000158!1.19e-09!14;UBERON:0003124!9.27e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;9.45e-13;4!UBERON:0001781;7.38e-09;3!UBERON:0001782;7.38e-09;3!UBERON:0000478;3.38e-08;24!UBERON:0005631;8.43e-07;10!UBERON:0000158;8.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.59e-15,14;UBERON:0000158,1.59e-15,14;UBERON:0003124,5.42e-15,7;UBERON:0001987,7.90e-13,4;UBERON:0004340,7.90e-13,4;UBERON:0001782,3.58e-09,3;UBERON:0005424,3.58e-09,3;UBERON:0000478,2.84e-08,24;UBERON:0004175,1.43e-07,25;UBERON:0006554,2.32e-07,47;UBERON:0001008,3.79e-07,48;UBERON:0005156,4.35e-07,59;UBERON:0000990,4.35e-07,59;UBERON:0005795,5.00e-07,22;UBERON:0003133,5.03e-07,48;UBERON:0001781,5.79e-07,4 | |||
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| |||
|short_description=p2@ZDHHC8P1 | |||
}} |
Revision as of 11:09, 12 September 2013
Short description: | p2@ZDHHC8P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ZDHHC8P1_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 31bp_to_ENST00000255890_5end |
EntrezGene: | NA |
HGNC: | 26461 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.12e-10 | 3 |
retinal pigment epithelial cell | 3.58e-09 | 3 |
extraembryonic cell | 1.24e-08 | 19 |
mesothelial cell | 2.97e-08 | 19 |
visual pigment cell | 5.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.59e-15 | 14 |
membranous layer | 1.59e-15 | 14 |
chorion | 5.42e-15 | 7 |
placenta | 7.90e-13 | 4 |
allantois | 7.90e-13 | 4 |
pigmented layer of retina | 3.58e-09 | 3 |
presumptive retinal pigmented epithelium | 3.58e-09 | 3 |
extraembryonic structure | 2.84e-08 | 24 |
internal genitalia | 1.43e-07 | 25 |
urinary system structure | 2.32e-07 | 47 |
renal system | 3.79e-07 | 48 |
reproductive structure | 4.35e-07 | 59 |
reproductive system | 4.35e-07 | 59 |
embryonic uterus | 5.00e-07 | 22 |
reproductive organ | 5.03e-07 | 48 |
layer of retina | 5.79e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.