FFCP PHASE1:Hg19::chr5:170736243..170736279,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30012|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13532|TSSclassifier=S|UniProt=O43711|association_with_transcript=-8bp_to_ENST00000296921,NM_021025,uc003mbf.2_5end|coexpression_cluster_id=C46|description=CAGE_peak_1_at_TLX3_5end|id=chr5:170736243..170736279,+|ontology_enrichment_celltype=CL:0000066!3.16e-09!254;CL:0002150!2.25e-07!3;CL:0000861!2.25e-07!3|ontology_enrichment_celltype_v019=CL:0000123;7.96e-09;2!CL:0000242;7.96e-09;2|ontology_enrichment_celltype_v019_2=CL:0000066,3.53e-09,253;CL:0000242,7.96e-09,2|ontology_enrichment_development_v019=UBERON:0008947;2.34e-15;29!UBERON:0006215;5.08e-12;3|ontology_enrichment_disease=DOID:305!3.52e-17!106;DOID:0050687!2.19e-16!143;DOID:162!3.56e-11!235;DOID:14566!1.19e-10!239|ontology_enrichment_disease_v019=DOID:305;8.24e-10;106!DOID:4468;6.77e-08;2!DOID:154;1.42e-07;2!DOID:4236;1.42e-07;2!DOID:120;5.42e-07;27!DOID:4362;5.77e-07;5|ontology_enrichment_disease_v019_2=DOID:0050687,4.62e-26,143;DOID:305,4.59e-24,106;DOID:162,1.11e-19,235;DOID:14566,4.72e-19,239;DOID:4468,6.00e-08,2;DOID:154,1.28e-07,2;DOID:4236,1.28e-07,2;DOID:120,5.09e-07,27;DOID:4362,5.54e-07,5|ontology_enrichment_uberon=UBERON:0001737!3.33e-19!9;UBERON:0003076!3.44e-16!15;UBERON:0003057!3.44e-16!15;UBERON:0004733!9.01e-12!12;UBERON:0002028!9.01e-12!12;UBERON:0007277!9.01e-12!12;UBERON:0004732!1.03e-10!13;UBERON:0002680!5.01e-10!9;UBERON:0001895!5.01e-10!9;UBERON:0010092!5.01e-10!9;UBERON:0001557!1.80e-09!19;UBERON:0000065!1.41e-08!53;UBERON:0000063!2.26e-08!97;UBERON:0008947!1.70e-07!38;UBERON:0003258!1.70e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;4.72e-32;9!UBERON:0001557;4.72e-32;9!UBERON:0000072;7.25e-11;37!UBERON:0000065;3.73e-09;44!UBERON:0004733;3.86e-07;12!UBERON:0002028;3.86e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.73e-32,9;UBERON:0001557,3.23e-14,19;UBERON:0008947,4.62e-11,38;UBERON:0003258,4.62e-11,38;UBERON:0003076,2.37e-10,15;UBERON:0003057,2.37e-10,15;UBERON:0000072,1.92e-08,47;UBERON:0004733,3.81e-07,12;UBERON:0002028,3.81e-07,12;UBERON:0007277,3.81e-07,12;UBERON:0000065,5.07e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.929551542956147,9.95146128147556,0.252320850875628,0,0,0,0,0,0,14.0785092047414,18.207146528435,17.5938051814942,15.9926260461971,16.5588377510229,16.8462139568879,14.1572873568173,11.3808449772701,10.3881732375525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,229.076735581893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,1.78940886313933,2.16903884225481,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,7.8007934983419,40.6797180424928,0.291604613383254,3.64612489359914,0,0,27.464712537075,30.0775587012931,12.7085476150025,0.219385397153973,9.04189247207618,0,0,0,0,0,1.95565269459615,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,4.21996129056054,3.91758739581955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,9.01940516486955,3.00695755052017,0,0,0,0,0.853828638089378,0,2.77695581336209,0,5.31061160140456,0,0,11.417247092112,13.2291663925996,11.4140485303961,0,0,0,0,0,0,2.15106521008283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.316801009558219,0,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.517131825446202,1.58679122091228,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,1.10929051536852,0.807253238237985,3.04366996859708,0,0,0,0,89.9203019149213,78.6921185356781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9078857929204,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,16.1630264524181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.022099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13532 | |||
|TSSclassifier=S | |||
|UniProt=O43711 | |||
|association_with_transcript=-8bp_to_ENST00000296921,NM_021025,uc003mbf.2_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_1_at_TLX3_5end | |||
|id=chr5:170736243..170736279,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.16e-09!254;CL:0002150!2.25e-07!3;CL:0000861!2.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.96e-09;2!CL:0000242;7.96e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.53e-09,253;CL:0000242,7.96e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.34e-15;29!UBERON:0006215;5.08e-12;3 | |||
|ontology_enrichment_disease=DOID:305!3.52e-17!106;DOID:0050687!2.19e-16!143;DOID:162!3.56e-11!235;DOID:14566!1.19e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:305;8.24e-10;106!DOID:4468;6.77e-08;2!DOID:154;1.42e-07;2!DOID:4236;1.42e-07;2!DOID:120;5.42e-07;27!DOID:4362;5.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.62e-26,143;DOID:305,4.59e-24,106;DOID:162,1.11e-19,235;DOID:14566,4.72e-19,239;DOID:4468,6.00e-08,2;DOID:154,1.28e-07,2;DOID:4236,1.28e-07,2;DOID:120,5.09e-07,27;DOID:4362,5.54e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.33e-19!9;UBERON:0003076!3.44e-16!15;UBERON:0003057!3.44e-16!15;UBERON:0004733!9.01e-12!12;UBERON:0002028!9.01e-12!12;UBERON:0007277!9.01e-12!12;UBERON:0004732!1.03e-10!13;UBERON:0002680!5.01e-10!9;UBERON:0001895!5.01e-10!9;UBERON:0010092!5.01e-10!9;UBERON:0001557!1.80e-09!19;UBERON:0000065!1.41e-08!53;UBERON:0000063!2.26e-08!97;UBERON:0008947!1.70e-07!38;UBERON:0003258!1.70e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.72e-32;9!UBERON:0001557;4.72e-32;9!UBERON:0000072;7.25e-11;37!UBERON:0000065;3.73e-09;44!UBERON:0004733;3.86e-07;12!UBERON:0002028;3.86e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.73e-32,9;UBERON:0001557,3.23e-14,19;UBERON:0008947,4.62e-11,38;UBERON:0003258,4.62e-11,38;UBERON:0003076,2.37e-10,15;UBERON:0003057,2.37e-10,15;UBERON:0000072,1.92e-08,47;UBERON:0004733,3.81e-07,12;UBERON:0002028,3.81e-07,12;UBERON:0007277,3.81e-07,12;UBERON:0000065,5.07e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.929551542956147,9.95146128147556,0.252320850875628,0,0,0,0,0,0,14.0785092047414,18.207146528435,17.5938051814942,15.9926260461971,16.5588377510229,16.8462139568879,14.1572873568173,11.3808449772701,10.3881732375525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,229.076735581893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,1.78940886313933,2.16903884225481,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,7.8007934983419,40.6797180424928,0.291604613383254,3.64612489359914,0,0,27.464712537075,30.0775587012931,12.7085476150025,0.219385397153973,9.04189247207618,0,0,0,0,0,1.95565269459615,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,4.21996129056054,3.91758739581955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,9.01940516486955,3.00695755052017,0,0,0,0,0.853828638089378,0,2.77695581336209,0,5.31061160140456,0,0,11.417247092112,13.2291663925996,11.4140485303961,0,0,0,0,0,0,2.15106521008283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.316801009558219,0,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.517131825446202,1.58679122091228,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,1.10929051536852,0.807253238237985,3.04366996859708,0,0,0,0,89.9203019149213,78.6921185356781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9078857929204,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,16.1630264524181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0.94808167039636,1.04617282831313,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,60.1782223072123,0,0,0,0,0,0.971421986118279,11.9309126365674,0,0.237840181555137,3.72722070728568,0,1.05673990496671,0.0771741581079447,0,0,0,0,1.76677620403451,0.297046400327086,1.2679671827502,0,0,0,0,3.74963271071881,0,0,0,0,0,5.20646155237509,0,0,1.0580536810308,0,0,0,0,0,3.67425652933167,0.203977659483963,0.26721740526556,1.10273879441814,0.50141507858475,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@TLX3 | |||
}} |
Revision as of 14:47, 13 September 2013
Short description: | p1@TLX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TLX3_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -8bp_to_ENST00000296921, NM_021025, uc003mbf.2_5end |
EntrezGene: | TLX3 |
HGNC: | 13532 |
UniProt: | O43711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.53e-09 | 253 |
Merkel cell | 7.96e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.73e-32 | 9 |
upper respiratory tract | 3.23e-14 | 19 |
respiratory primordium | 4.62e-11 | 38 |
endoderm of foregut | 4.62e-11 | 38 |
posterior neural tube | 2.37e-10 | 15 |
chordal neural plate | 2.37e-10 | 15 |
segment of respiratory tract | 1.92e-08 | 47 |
segmental subdivision of hindbrain | 3.81e-07 | 12 |
hindbrain | 3.81e-07 | 12 |
presumptive hindbrain | 3.81e-07 | 12 |
respiratory tract | 5.07e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.62e-26 | 143 |
carcinoma | 4.59e-24 | 106 |
cancer | 1.11e-19 | 235 |
disease of cellular proliferation | 4.72e-19 | 239 |
clear cell adenocarcinoma | 6.00e-08 | 2 |
mixed cell type cancer | 1.28e-07 | 2 |
carcinosarcoma | 1.28e-07 | 2 |
female reproductive organ cancer | 5.09e-07 | 27 |
cervical cancer | 5.54e-07 | 5 |
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