FFCP PHASE1:Hg19::chr9:114676963..114676977,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:114676963..114676977,+|id=chr9:114676963..114676977,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;1.64e-20;3!CL:1000428;1.64e-20;3!CL:0002559;1.54e-12;5!CL:0002595;1.54e-12;5!CL:0000775;2.05e-10;3!CL:0000784;8.18e-10;3!CL:0002591;5.58e-08;1!CL:0002379;5.58e-08;1!CL:0000306;8.99e-08;4!CL:0002222;8.99e-08;4!CL:0002224;8.99e-08;4!CL:0000359;4.90e-07;32|ontology_enrichment_celltype_v019_2=CL:0000346,7.12e-21,3;CL:1000428,7.12e-21,3;CL:0002559,9.39e-13,5;CL:0002595,1.29e-12,5;CL:0000775,1.92e-10,3;CL:0000784,3.49e-10,3;CL:0002379,8.12e-08,1;CL:0002591,8.69e-08,1;CL:0000306,9.97e-08,4;CL:0002222,9.97e-08,4;CL:0002224,9.97e-08,4;CL:0000359,4.99e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3112;1.65e-08;1!DOID:3620;5.58e-08;1!DOID:3565;5.58e-08;1!DOID:3571;5.58e-08;1|ontology_enrichment_disease_v019_2=DOID:3112,1.65e-08,1;DOID:3620,8.12e-08,1;DOID:3565,8.12e-08,1;DOID:3571,9.29e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000412;1.64e-20;3!UBERON:0001992;1.64e-20;3!UBERON:0002073;1.54e-12;5!UBERON:0003834;1.54e-12;5!UBERON:0001533;1.54e-12;5!UBERON:0003513;4.23e-09;7!UBERON:0010077;8.99e-08;4!UBERON:0005389;8.99e-08;4!UBERON:0000484;8.99e-08;4!UBERON:0000965;8.99e-08;4!UBERON:0001803;8.99e-08;4!UBERON:0002067;3.53e-07;9!UBERON:0010371;6.88e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.12e-21,3;UBERON:0001992,7.12e-21,3;UBERON:0002073,9.39e-13,5;UBERON:0005086,9.39e-13,5;UBERON:0003834,1.29e-12,5;UBERON:0001533,1.29e-12,5;UBERON:0003513,3.74e-09,7;UBERON:0010077,9.97e-08,4;UBERON:0005389,9.97e-08,4;UBERON:0000484,9.97e-08,4;UBERON:0002546,9.97e-08,4;UBERON:0000965,9.97e-08,4;UBERON:0001803,9.97e-08,4;UBERON:0003073,9.97e-08,4;UBERON:0005426,9.97e-08,4;UBERON:0002067,2.70e-07,9;UBERON:0004016,2.70e-07,9;UBERON:0010083,2.70e-07,9|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0.786021525498329,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.886917589850256,0.263504357079378,0,0,0,0,0,0.132957960518865,1.66943437013739,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0.113432183160021,0,0,0.847727604638247,0.300091096084402,0.206105058476878,0,0,0,0.292311015483596,0,0.368199594569197,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0.171567810298526,0,0,0.502644862058154,0.0925884451585296,0,0,2.88662684050547,0,0,0.288732895522148,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0.112085143993527,0,0.646882724578552,0,0,0,0,0,1.27587750330633,3.74503511973591,2.99161459204025,0.414415513436035,0.24538298343828,1.00034104211935,0.271265023699736,0.207970861530807,0.713715955188647,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0,0,0,0.120859449591622,0.200506470303285,0,0,0.546273504020151,0.131124414959424,0,0.693138033939733,0,0,0.73886140225013,0,0.340187410553031,0,0,0,0.501689773854853,0.764628819135115,0,0,0.438519753291869,0,0.256450125116389,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0.460511024178389,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.08903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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:114676963..114676977,+ | |||
|id=chr9:114676963..114676977,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.64e-20;3!CL:1000428;1.64e-20;3!CL:0002559;1.54e-12;5!CL:0002595;1.54e-12;5!CL:0000775;2.05e-10;3!CL:0000784;8.18e-10;3!CL:0002591;5.58e-08;1!CL:0002379;5.58e-08;1!CL:0000306;8.99e-08;4!CL:0002222;8.99e-08;4!CL:0002224;8.99e-08;4!CL:0000359;4.90e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.12e-21,3;CL:1000428,7.12e-21,3;CL:0002559,9.39e-13,5;CL:0002595,1.29e-12,5;CL:0000775,1.92e-10,3;CL:0000784,3.49e-10,3;CL:0002379,8.12e-08,1;CL:0002591,8.69e-08,1;CL:0000306,9.97e-08,4;CL:0002222,9.97e-08,4;CL:0002224,9.97e-08,4;CL:0000359,4.99e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.65e-08;1!DOID:3620;5.58e-08;1!DOID:3565;5.58e-08;1!DOID:3571;5.58e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.65e-08,1;DOID:3620,8.12e-08,1;DOID:3565,8.12e-08,1;DOID:3571,9.29e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.64e-20;3!UBERON:0001992;1.64e-20;3!UBERON:0002073;1.54e-12;5!UBERON:0003834;1.54e-12;5!UBERON:0001533;1.54e-12;5!UBERON:0003513;4.23e-09;7!UBERON:0010077;8.99e-08;4!UBERON:0005389;8.99e-08;4!UBERON:0000484;8.99e-08;4!UBERON:0000965;8.99e-08;4!UBERON:0001803;8.99e-08;4!UBERON:0002067;3.53e-07;9!UBERON:0010371;6.88e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.12e-21,3;UBERON:0001992,7.12e-21,3;UBERON:0002073,9.39e-13,5;UBERON:0005086,9.39e-13,5;UBERON:0003834,1.29e-12,5;UBERON:0001533,1.29e-12,5;UBERON:0003513,3.74e-09,7;UBERON:0010077,9.97e-08,4;UBERON:0005389,9.97e-08,4;UBERON:0000484,9.97e-08,4;UBERON:0002546,9.97e-08,4;UBERON:0000965,9.97e-08,4;UBERON:0001803,9.97e-08,4;UBERON:0003073,9.97e-08,4;UBERON:0005426,9.97e-08,4;UBERON:0002067,2.70e-07,9;UBERON:0004016,2.70e-07,9;UBERON:0010083,2.70e-07,9 | |||
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| |||
|short_description=p@chr9:114676963..114676977,+ | |||
}} |
Revision as of 06:59, 14 September 2013
Short description: | p@chr9:114676963..114676977, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:114676963..114676977, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.12e-21 | 3 |
stem cell of epidermis | 7.12e-21 | 3 |
hair follicle cell | 9.39e-13 | 5 |
smooth muscle cell of the subclavian artery | 1.29e-12 | 5 |
neutrophil | 1.92e-10 | 3 |
plasmacytoid dendritic cell | 3.49e-10 | 3 |
meningothelial cell | 8.12e-08 | 1 |
smooth muscle cell of the pulmonary artery | 8.69e-08 | 1 |
crystallin accumulating cell | 9.97e-08 | 4 |
vertebrate lens cell | 9.97e-08 | 4 |
lens epithelial cell | 9.97e-08 | 4 |
vascular associated smooth muscle cell | 4.99e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.12e-21 | 3 |
papillary layer of dermis | 7.12e-21 | 3 |
hair follicle | 9.39e-13 | 5 |
hair follicle placode | 9.39e-13 | 5 |
thoracic segment blood vessel | 1.29e-12 | 5 |
subclavian artery | 1.29e-12 | 5 |
trunk blood vessel | 3.74e-09 | 7 |
cuboidal epithelium | 9.97e-08 | 4 |
transparent eye structure | 9.97e-08 | 4 |
simple cuboidal epithelium | 9.97e-08 | 4 |
cranial placode | 9.97e-08 | 4 |
lens of camera-type eye | 9.97e-08 | 4 |
epithelium of lens | 9.97e-08 | 4 |
lens placode | 9.97e-08 | 4 |
lens vesicle | 9.97e-08 | 4 |
dermis | 2.70e-07 | 9 |
dermatome | 2.70e-07 | 9 |
future dermis | 2.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.65e-08 | 1 |
central nervous system cancer | 8.12e-08 | 1 |
meningioma | 8.12e-08 | 1 |
liver cancer | 9.29e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.