FFCP PHASE1:Hg19::chrX:64070870..64070875,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:64070870..64070875,+|id=chrX:64070870..64070875,+|ontology_enrichment_celltype=CL:0000542!3.57e-51!53;CL:0000051!3.57e-51!53;CL:0000838!9.02e-49!52;CL:0000945!2.46e-31!24;CL:0000826!2.46e-31!24;CL:0000236!1.66e-28!14;CL:0002087!3.38e-26!119;CL:0000791!5.33e-24!18;CL:0000789!5.33e-24!18;CL:0002420!5.33e-24!18;CL:0002419!5.33e-24!18;CL:0000790!5.33e-24!18;CL:0000738!4.12e-22!140;CL:0000084!4.36e-22!25;CL:0000827!4.36e-22!25;CL:0002031!3.19e-20!124;CL:0000037!4.27e-16!172;CL:0000566!4.27e-16!172;CL:0002032!5.10e-15!165;CL:0000837!5.10e-15!165;CL:0000988!1.17e-14!182;CL:0000625!4.60e-12!11;CL:0000624!1.24e-11!6;CL:0000817!3.01e-09!3;CL:0000815!3.98e-07!2;CL:0000792!3.98e-07!2;CL:0002677!3.98e-07!2|ontology_enrichment_celltype_v019=CL:0000236;4.80e-29;13!CL:0000945;2.21e-27;24!CL:0000542;4.10e-22;53!CL:0000946;1.13e-11;1!CL:0000786;1.13e-11;1!CL:0000791;1.40e-09;18!CL:0000789;1.40e-09;18!CL:0002419;1.40e-09;18!CL:0000625;3.11e-09;11!CL:0000084;6.06e-07;25|ontology_enrichment_celltype_v019_2=CL:0000236,2.99e-36,14;CL:0000542,1.12e-31,53;CL:0000051,1.12e-31,53;CL:0000838,1.83e-27,52;CL:0000945,2.41e-27,24;CL:0000826,2.41e-27,24;CL:0002087,1.87e-13,115;CL:0000946,1.19e-11,1;CL:0000786,1.19e-11,1;CL:0000980,1.19e-11,1;CL:0000738,4.32e-11,136;CL:0002031,8.25e-11,120;CL:0000791,1.40e-09,18;CL:0000789,1.40e-09,18;CL:0002420,1.40e-09,18;CL:0002419,1.40e-09,18;CL:0000790,1.40e-09,18;CL:0000625,3.24e-09,11;CL:0002032,4.51e-09,161;CL:0000837,4.51e-09,161;CL:0000037,1.30e-08,168;CL:0000988,4.47e-08,177;CL:0000084,6.06e-07,25;CL:0000827,6.06e-07,25|ontology_enrichment_development_v019=CL:0000051;4.10e-22;53!UBERON:0001045;3.85e-12;1!CL:0000790;1.40e-09;18|ontology_enrichment_disease=DOID:0060058!1.64e-09!10|ontology_enrichment_disease_v019=DOID:12603;1.13e-11;1|ontology_enrichment_disease_v019_2=DOID:12603,8.64e-12,1|ontology_enrichment_uberon=UBERON:0004177!6.53e-10!7;UBERON:0002370!2.30e-07!4;UBERON:0005058!2.30e-07!4;UBERON:0009113!2.30e-07!4;UBERON:0003295!2.30e-07!4;UBERON:0005562!2.30e-07!4|ontology_enrichment_uberon_v019=UBERON:0001154;3.85e-12;1!UBERON:0001153;3.85e-12;1!UBERON:0009854;3.85e-12;1!UBERON:0002372;1.13e-11;1!UBERON:0001961;1.13e-11;1!UBERON:0001744;1.13e-11;1!UBERON:0001042;1.13e-11;1!UBERON:0001735;1.13e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.06e-12,1;UBERON:0001153,4.06e-12,1;UBERON:0001045,4.06e-12,1;UBERON:0002372,1.63e-11,1;UBERON:0001961,1.63e-11,1;UBERON:0001744,1.63e-11,1;UBERON:0001735,1.63e-11,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,5.65510564236202,0.995184627411951,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,1.20118796110804,2.87376219977242,0,4.77026877267682,2.27685187643779,4.11066032559657,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,1.62961133316795,0.473447805734733,1.94826728407911,0.668462741311041,0.883817722424512,0.221533894583621,0,0,0.910415432919148,0.493313713811028,0.829050053357545,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.793165398882963,0,0.34362744548263,0,1.27426165729639,2.60433381542567,0,0.150575119077773,0.127986611154418,3.74792179657038,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,1.67222857613147,0.721346064882224,0.924843963529383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.42095601639213,0.993195428733726,0,0.0636471582781649,0,0,0,1.0776328482334,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chrX:64070870..64070875,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:64070870..64070875,+ | |||
|id=chrX:64070870..64070875,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.57e-51!53;CL:0000051!3.57e-51!53;CL:0000838!9.02e-49!52;CL:0000945!2.46e-31!24;CL:0000826!2.46e-31!24;CL:0000236!1.66e-28!14;CL:0002087!3.38e-26!119;CL:0000791!5.33e-24!18;CL:0000789!5.33e-24!18;CL:0002420!5.33e-24!18;CL:0002419!5.33e-24!18;CL:0000790!5.33e-24!18;CL:0000738!4.12e-22!140;CL:0000084!4.36e-22!25;CL:0000827!4.36e-22!25;CL:0002031!3.19e-20!124;CL:0000037!4.27e-16!172;CL:0000566!4.27e-16!172;CL:0002032!5.10e-15!165;CL:0000837!5.10e-15!165;CL:0000988!1.17e-14!182;CL:0000625!4.60e-12!11;CL:0000624!1.24e-11!6;CL:0000817!3.01e-09!3;CL:0000815!3.98e-07!2;CL:0000792!3.98e-07!2;CL:0002677!3.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.80e-29;13!CL:0000945;2.21e-27;24!CL:0000542;4.10e-22;53!CL:0000946;1.13e-11;1!CL:0000786;1.13e-11;1!CL:0000791;1.40e-09;18!CL:0000789;1.40e-09;18!CL:0002419;1.40e-09;18!CL:0000625;3.11e-09;11!CL:0000084;6.06e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.99e-36,14;CL:0000542,1.12e-31,53;CL:0000051,1.12e-31,53;CL:0000838,1.83e-27,52;CL:0000945,2.41e-27,24;CL:0000826,2.41e-27,24;CL:0002087,1.87e-13,115;CL:0000946,1.19e-11,1;CL:0000786,1.19e-11,1;CL:0000980,1.19e-11,1;CL:0000738,4.32e-11,136;CL:0002031,8.25e-11,120;CL:0000791,1.40e-09,18;CL:0000789,1.40e-09,18;CL:0002420,1.40e-09,18;CL:0002419,1.40e-09,18;CL:0000790,1.40e-09,18;CL:0000625,3.24e-09,11;CL:0002032,4.51e-09,161;CL:0000837,4.51e-09,161;CL:0000037,1.30e-08,168;CL:0000988,4.47e-08,177;CL:0000084,6.06e-07,25;CL:0000827,6.06e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;4.10e-22;53!UBERON:0001045;3.85e-12;1!CL:0000790;1.40e-09;18 | |||
|ontology_enrichment_disease=DOID:0060058!1.64e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.53e-10!7;UBERON:0002370!2.30e-07!4;UBERON:0005058!2.30e-07!4;UBERON:0009113!2.30e-07!4;UBERON:0003295!2.30e-07!4;UBERON:0005562!2.30e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.85e-12;1!UBERON:0001153;3.85e-12;1!UBERON:0009854;3.85e-12;1!UBERON:0002372;1.13e-11;1!UBERON:0001961;1.13e-11;1!UBERON:0001744;1.13e-11;1!UBERON:0001042;1.13e-11;1!UBERON:0001735;1.13e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.06e-12,1;UBERON:0001153,4.06e-12,1;UBERON:0001045,4.06e-12,1;UBERON:0002372,1.63e-11,1;UBERON:0001961,1.63e-11,1;UBERON:0001744,1.63e-11,1;UBERON:0001735,1.63e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,5.65510564236202,0.995184627411951,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,1.20118796110804,2.87376219977242,0,4.77026877267682,2.27685187643779,4.11066032559657,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,1.62961133316795,0.473447805734733,1.94826728407911,0.668462741311041,0.883817722424512,0.221533894583621,0,0,0.910415432919148,0.493313713811028,0.829050053357545,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.793165398882963,0,0.34362744548263,0,1.27426165729639,2.60433381542567,0,0.150575119077773,0.127986611154418,3.74792179657038,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,1.67222857613147,0.721346064882224,0.924843963529383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.42095601639213,0.993195428733726,0,0.0636471582781649,0,0,0,1.0776328482334,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chrX:64070870..64070875,+ | |||
}} |
Revision as of 12:20, 14 September 2013
Short description: | p@chrX:64070870..64070875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:64070870..64070875, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.99e-36 | 14 |
lymphocyte | 1.12e-31 | 53 |
common lymphoid progenitor | 1.12e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.83e-27 | 52 |
lymphocyte of B lineage | 2.41e-27 | 24 |
pro-B cell | 2.41e-27 | 24 |
nongranular leukocyte | 1.87e-13 | 115 |
antibody secreting cell | 1.19e-11 | 1 |
plasma cell | 1.19e-11 | 1 |
plasmablast | 1.19e-11 | 1 |
leukocyte | 4.32e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 8.25e-11 | 120 |
mature alpha-beta T cell | 1.40e-09 | 18 |
alpha-beta T cell | 1.40e-09 | 18 |
immature T cell | 1.40e-09 | 18 |
mature T cell | 1.40e-09 | 18 |
immature alpha-beta T cell | 1.40e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.24e-09 | 11 |
hematopoietic oligopotent progenitor cell | 4.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-09 | 161 |
hematopoietic stem cell | 1.30e-08 | 168 |
hematopoietic cell | 4.47e-08 | 177 |
T cell | 6.06e-07 | 25 |
pro-T cell | 6.06e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.06e-12 | 1 |
caecum | 4.06e-12 | 1 |
midgut | 4.06e-12 | 1 |
tonsil | 1.63e-11 | 1 |
mucosa-associated lymphoid tissue | 1.63e-11 | 1 |
lymphoid tissue | 1.63e-11 | 1 |
tonsillar ring | 1.63e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.64e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.