FFCP PHASE1:Hg19::chrX:68835999..68836028,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1896|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3157|TSSclassifier=S|UniProt=|association_with_transcript=38bp_to_ENST00000524573_5end|description=CAGE_peak_2_at_EDA_5end|id=chrX:68835999..68836028,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.71e-12;12!CL:0002262;7.50e-07;2!CL:1000398;7.50e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,1.84e-12,12;CL:0002262,5.41e-07,2;CL:1000398,5.41e-07,2|ontology_enrichment_development_v019=UBERON:0003104;1.32e-16;31!UBERON:0004161;3.52e-10;11!UBERON:0009497;1.71e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.77e-26!115;UBERON:0002346!3.81e-09!90;UBERON:0001049!5.62e-08!57;UBERON:0005068!5.62e-08!57;UBERON:0006241!5.62e-08!57;UBERON:0007135!5.62e-08!57;UBERON:0005057!1.05e-07!26;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0001017!1.72e-07!82;UBERON:0002616!3.05e-07!59;UBERON:0003080!4.11e-07!42;UBERON:0005743!4.44e-07!86;UBERON:0001893!4.77e-07!34;UBERON:0002368!5.75e-07!35;UBERON:0000955!6.21e-07!69;UBERON:0006238!6.21e-07!69;UBERON:0002791!7.59e-07!33;UBERON:0009497!8.08e-07!25;UBERON:0000015!8.08e-07!25;UBERON:0002423!8.08e-07!25;UBERON:0006235!8.08e-07!25;UBERON:0004161!8.08e-07!25|ontology_enrichment_uberon_v019=UBERON:0000922;3.65e-12;49!UBERON:0002107;1.90e-09;19!UBERON:0006925;1.90e-09;19!UBERON:0007100;9.62e-09;25!UBERON:0002423;1.38e-08;25!UBERON:0000341;1.05e-07;2!UBERON:0001281;7.50e-07;2!UBERON:0003497;7.50e-07;2!UBERON:0003909;7.50e-07;2!UBERON:0003835;7.50e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-09,19;UBERON:0006925,1.48e-09,19;UBERON:0008836,1.48e-09,19;UBERON:0009497,1.17e-08,25;UBERON:0000015,1.17e-08,25;UBERON:0002423,1.17e-08,25;UBERON:0006235,1.17e-08,25;UBERON:0004161,1.17e-08,25;UBERON:0007100,4.34e-08,27;UBERON:0008835,4.67e-08,22;UBERON:0003894,4.67e-08,22;UBERON:0005172,5.23e-08,54;UBERON:0005173,5.23e-08,54;UBERON:0000341,8.69e-08,2;UBERON:0009854,1.21e-07,23;UBERON:0001281,5.41e-07,2;UBERON:0003497,5.41e-07,2;UBERON:0003909,5.41e-07,2;UBERON:0003835,5.41e-07,2;UBERON:0007499,6.37e-07,25;UBERON:0002417,6.65e-07,60;UBERON:0000916,6.65e-07,60;UBERON:0003103,7.87e-07,68|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37696839079683,1.17903228824749,0.616804496998528,0,0.977766799900771,0.473447805734733,1.94826728407911,0,0,0.443067789167242,0,0,0,0.164437904603676,0,0,1.18629250529648,2.1403266247177,2.09071047609954,0,0.766440987203842,0.68725489096526,0,0.318565414324097,0,0,0.150575119077773,0.383959833463255,1.24930726552346,0.473554504088034,0,0.80642697289893,0.802320587350522,0.579297615531196,0,2.68280343881454,0.383587685530591,0,0,0,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,2.42479209725439,2.61539044981534,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0.4115740113314,0,0,0,1.77236972004421,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.537101224341368,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0.213648142254946,3.84991942105343,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0.223676107892416,0,0,0,0,0,0,0,0.561421621224659,1.46508179271894,0,0,0,0.71623345421307,0,0,0,0.422008249231538,0.556543525114529,0,0.211125408127993,0.796991953004279,0.828851746593443,0.7557982435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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1896 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3157 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000524573_5end | |||
|description=CAGE_peak_2_at_EDA_5end | |||
|id=chrX:68835999..68836028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.71e-12;12!CL:0002262;7.50e-07;2!CL:1000398;7.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.84e-12,12;CL:0002262,5.41e-07,2;CL:1000398,5.41e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.32e-16;31!UBERON:0004161;3.52e-10;11!UBERON:0009497;1.71e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.77e-26!115;UBERON:0002346!3.81e-09!90;UBERON:0001049!5.62e-08!57;UBERON:0005068!5.62e-08!57;UBERON:0006241!5.62e-08!57;UBERON:0007135!5.62e-08!57;UBERON:0005057!1.05e-07!26;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0001017!1.72e-07!82;UBERON:0002616!3.05e-07!59;UBERON:0003080!4.11e-07!42;UBERON:0005743!4.44e-07!86;UBERON:0001893!4.77e-07!34;UBERON:0002368!5.75e-07!35;UBERON:0000955!6.21e-07!69;UBERON:0006238!6.21e-07!69;UBERON:0002791!7.59e-07!33;UBERON:0009497!8.08e-07!25;UBERON:0000015!8.08e-07!25;UBERON:0002423!8.08e-07!25;UBERON:0006235!8.08e-07!25;UBERON:0004161!8.08e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.65e-12;49!UBERON:0002107;1.90e-09;19!UBERON:0006925;1.90e-09;19!UBERON:0007100;9.62e-09;25!UBERON:0002423;1.38e-08;25!UBERON:0000341;1.05e-07;2!UBERON:0001281;7.50e-07;2!UBERON:0003497;7.50e-07;2!UBERON:0003909;7.50e-07;2!UBERON:0003835;7.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-09,19;UBERON:0006925,1.48e-09,19;UBERON:0008836,1.48e-09,19;UBERON:0009497,1.17e-08,25;UBERON:0000015,1.17e-08,25;UBERON:0002423,1.17e-08,25;UBERON:0006235,1.17e-08,25;UBERON:0004161,1.17e-08,25;UBERON:0007100,4.34e-08,27;UBERON:0008835,4.67e-08,22;UBERON:0003894,4.67e-08,22;UBERON:0005172,5.23e-08,54;UBERON:0005173,5.23e-08,54;UBERON:0000341,8.69e-08,2;UBERON:0009854,1.21e-07,23;UBERON:0001281,5.41e-07,2;UBERON:0003497,5.41e-07,2;UBERON:0003909,5.41e-07,2;UBERON:0003835,5.41e-07,2;UBERON:0007499,6.37e-07,25;UBERON:0002417,6.65e-07,60;UBERON:0000916,6.65e-07,60;UBERON:0003103,7.87e-07,68 | |||
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| |||
|short_description=p2@EDA | |||
}} |
Revision as of 12:23, 14 September 2013
Short description: | p2@EDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EDA_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000524573_5end |
EntrezGene: | EDA |
HGNC: | 3157 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.84e-12 | 12 |
endothelial cell of sinusoid | 5.41e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.48e-09 | 19 |
digestive gland | 1.48e-09 | 19 |
liver bud | 1.48e-09 | 19 |
epithelium of foregut-midgut junction | 1.17e-08 | 25 |
anatomical boundary | 1.17e-08 | 25 |
hepatobiliary system | 1.17e-08 | 25 |
foregut-midgut junction | 1.17e-08 | 25 |
septum transversum | 1.17e-08 | 25 |
primary circulatory organ | 4.34e-08 | 27 |
hepatic diverticulum | 4.67e-08 | 22 |
liver primordium | 4.67e-08 | 22 |
abdomen element | 5.23e-08 | 54 |
abdominal segment element | 5.23e-08 | 54 |
throat | 8.69e-08 | 2 |
digestive tract diverticulum | 1.21e-07 | 23 |
hepatic sinusoid | 5.41e-07 | 2 |
abdomen blood vessel | 5.41e-07 | 2 |
sinusoid | 5.41e-07 | 2 |
abdominal segment blood vessel | 5.41e-07 | 2 |
epithelial sac | 6.37e-07 | 25 |
abdominal segment of trunk | 6.65e-07 | 60 |
abdomen | 6.65e-07 | 60 |
compound organ | 7.87e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.