FFCP PHASE1:Hg19::chr11:111794453..111794471,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=1410 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2389 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000527950_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_12_at_CRYAB_5end | |||
|id=chr11:111794453..111794471,- | |||
|ontology_enrichment_celltype=CL:0000136!3.80e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.05e-17;3!CL:0000136;5.01e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.03e-17,3;CL:0000136,7.17e-13,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.06e-07;1!UBERON:0010227;6.98e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.33e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.19e-12,2;DOID:178,8.75e-07,1;DOID:326,8.75e-07,1;DOID:3978,8.75e-07,1;DOID:3394,8.75e-07,1;DOID:5844,8.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-26!115;UBERON:0001049!1.32e-13!57;UBERON:0005068!1.32e-13!57;UBERON:0006241!1.32e-13!57;UBERON:0007135!1.32e-13!57;UBERON:0005743!3.44e-13!86;UBERON:0001017!9.61e-13!82;UBERON:0002616!1.23e-12!59;UBERON:0000475!1.46e-11!365;UBERON:0000955!2.66e-11!69;UBERON:0006238!2.66e-11!69;UBERON:0000073!2.80e-11!94;UBERON:0001016!2.80e-11!94;UBERON:0003080!1.90e-10!42;UBERON:0003075!6.45e-10!86;UBERON:0007284!6.45e-10!86;UBERON:0002780!1.08e-09!41;UBERON:0001890!1.08e-09!41;UBERON:0006240!1.08e-09!41;UBERON:0002346!1.76e-09!90;UBERON:0000025!1.09e-08!194;UBERON:0002298!9.76e-08!8;UBERON:0002020!1.20e-07!34;UBERON:0003528!1.20e-07!34;UBERON:0003103!1.33e-07!69;UBERON:0001893!1.41e-07!34;UBERON:0004111!1.49e-07!241;UBERON:0002791!3.69e-07!33;UBERON:0000477!5.55e-07!286;UBERON:0003056!9.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.05e-17;3!UBERON:0007100;6.55e-13;25!UBERON:0002072;8.01e-11;5!UBERON:0004151;1.67e-08;3!UBERON:0003978;3.73e-08;3!UBERON:0000946;3.73e-08;3!UBERON:0002113;8.64e-08;24!UBERON:0011143;8.64e-08;24!UBERON:0002084;4.06e-07;1!UBERON:0002082;4.06e-07;1!UBERON:0002079;6.98e-07;1!UBERON:0002146;6.98e-07;1!UBERON:0005623;6.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.03e-17,3;UBERON:0003103,4.91e-15,68;UBERON:0007100,6.23e-12,27;UBERON:0002072,7.89e-11,5;UBERON:0004151,1.76e-08,3;UBERON:0003978,3.54e-08,3;UBERON:0009751,3.54e-08,3;UBERON:0000946,3.54e-08,3;UBERON:0002523,3.54e-08,3;UBERON:0005983,3.54e-08,3;UBERON:0002165,3.54e-08,3;UBERON:0002062,3.54e-08,3;UBERON:0007280,3.54e-08,3;UBERON:0002113,3.55e-07,26;UBERON:0003918,3.55e-07,26;UBERON:0011143,3.55e-07,26;UBERON:0005095,3.55e-07,26;UBERON:0007687,3.55e-07,26;UBERON:0002084,3.95e-07,1;UBERON:0002082,3.95e-07,1;UBERON:0010226,3.95e-07,1;UBERON:0002079,7.82e-07,1;UBERON:0002146,8.27e-07,1;UBERON:0005623,8.27e-07,1 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0.446961094427288,0,7.59899634504932,2.52687949370732,6.00726944859629,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,8.51363990735132,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0.113432183160021,0,0.85422955527427,0,0,0.309157587715317,0.772921620136887,0.558350568994769,0.337552664482532,0.68205903612839,0,0.368199594569197,0.323292113637624,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,0.381988425558278,1.17217447210047,0,0.411309970813294,0.300343057843917,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.385076685522074,1.56869953835371,0,0.316654886678627,0,0,0,0,0,1.00337954770971,1.78413391131527,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.876901770507525,1.15755106853338,0,0,0,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0.969332746095218,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,2.53197677433632,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.569797163602908,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,1.39641200636127,2.06244381610515,0,1.99679000498991,3.004582336956,2.67805748930247,0.806201669840715,0.360299883542404,0,0.709048640765013,0.576911008668165,0.539228350833479,1.08270229666224,0,0,0.408610218334727,0,0,0,0,0,0.607495566580247,0,31.6010886269785,14.6872846777995,0,0.537862017998534,0,2.1440859791201,7.94510364438518,0,0,0,0,0,0,0,0,0.439656701034247,0,0.258565912723101,0.92562821219883,1.19760786519031,0,1.06787412567695,0,0,0,0,0,0,0.544017803369474,1.0027595760908,3.06345576763462,5.57383472206668,0,0,0.244052529803926,0.625954653532499,0.573409195690071,0.443716206147409,0.683060432355218,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,8.1997285948143,0.345430341731199,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0,0,0.321146125482298,0,0.638535436228605,0,0,0.899044282034833,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0.271878931907327,0.591954962065642,0,0,0,0.785577949580009,0,0,8.85303123996348,0,1.1436247068265,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,3.90137359943262,0,0.718639647993729,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0.339854229375634,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0,0.543931921527318,0,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0.26721740526556,0,0.250707539292375,0.909344378618873,0.267964130156178,0,0.620597975171371,0.852935927603924,0,0,0.0620747142958579,0,0.12729431655633,0,0.653150243690884,0.342233301085281,0.202056159043763,0.286888821570705,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0,1.00636896795513,0 | |||
|short_description=p12@CRYAB | |||
}} |
Revision as of 10:19, 11 January 2014
Short description: | p12@CRYAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_CRYAB_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -7bp_to_ENST00000527950_5end |
EntrezGene: | CRYAB |
HGNC: | 2389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.03e-17 | 3 |
fat cell | 7.17e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.03e-17 | 3 |
compound organ | 4.91e-15 | 68 |
primary circulatory organ | 6.23e-12 | 27 |
hypodermis | 7.89e-11 | 5 |
cardiac chamber | 1.76e-08 | 3 |
valve | 3.54e-08 | 3 |
cardiac mesenchyme | 3.54e-08 | 3 |
cardial valve | 3.54e-08 | 3 |
tunica intima | 3.54e-08 | 3 |
heart layer | 3.54e-08 | 3 |
endocardium | 3.54e-08 | 3 |
endocardial cushion | 3.54e-08 | 3 |
presumptive endocardium | 3.54e-08 | 3 |
kidney | 3.55e-07 | 26 |
kidney mesenchyme | 3.55e-07 | 26 |
upper urinary tract | 3.55e-07 | 26 |
kidney rudiment | 3.55e-07 | 26 |
kidney field | 3.55e-07 | 26 |
heart left ventricle | 3.95e-07 | 1 |
cardiac ventricle | 3.95e-07 | 1 |
future cardiac ventricle | 3.95e-07 | 1 |
left cardiac atrium | 7.82e-07 | 1 |
pulmonary valve | 8.27e-07 | 1 |
semi-lunar valve | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.19e-12 | 2 |
vascular disease | 8.75e-07 | 1 |
ischemia | 8.75e-07 | 1 |
extrinsic cardiomyopathy | 8.75e-07 | 1 |
myocardial ischemia | 8.75e-07 | 1 |
myocardial infarction | 8.75e-07 | 1 |