FFCP PHASE1:Hg19::chr11:45825996..45826007,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20197 | |||
|TSSclassifier=strong | |||
|UniProt=Q96A29 | |||
|association_with_transcript=39bp_to_ENST00000314134_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_SLC35C1_5end | |||
|id=chr11:45825996..45826007,+ | |||
|ontology_enrichment_celltype=CL:0000223!8.68e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.88e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.01e-11;1!UBERON:0006242;1.01e-11;1!UBERON:0007123;3.04e-09;5!UBERON:0009497;6.39e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.32e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.58e-10!169;UBERON:0000925!1.58e-10!169;UBERON:0006595!1.58e-10!169;UBERON:0001007!5.44e-09!155;UBERON:0001555!5.44e-09!155;UBERON:0007026!5.44e-09!155;UBERON:0000161!1.24e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.40e-15;25!UBERON:0002372;1.01e-11;1!UBERON:0001961;1.01e-11;1!UBERON:0001744;1.01e-11;1!UBERON:0001042;1.01e-11;1!UBERON:0001735;1.01e-11;1!UBERON:0002368;1.08e-10;33!UBERON:0002107;2.24e-09;19!UBERON:0006925;2.24e-09;19!UBERON:0002046;3.04e-09;5!UBERON:0000949;1.02e-07;43!UBERON:0002294;6.20e-07;7!UBERON:0001173;6.20e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.99e-15,25;UBERON:0000015,4.99e-15,25;UBERON:0002423,4.99e-15,25;UBERON:0006235,4.99e-15,25;UBERON:0004161,4.99e-15,25;UBERON:0003929,9.64e-15,54;UBERON:0008835,3.28e-12,22;UBERON:0003894,3.28e-12,22;UBERON:0002372,9.61e-12,1;UBERON:0001961,9.61e-12,1;UBERON:0001744,9.61e-12,1;UBERON:0001735,9.61e-12,1;UBERON:0009854,1.13e-11,23;UBERON:0004119,9.53e-11,160;UBERON:0000925,9.53e-11,160;UBERON:0006595,9.53e-11,160;UBERON:0007499,9.90e-11,25;UBERON:0002368,1.31e-10,35;UBERON:0009856,2.59e-10,26;UBERON:0001007,2.81e-10,145;UBERON:0001555,2.81e-10,145;UBERON:0007026,2.81e-10,145;UBERON:0002107,2.24e-09,19;UBERON:0006925,2.24e-09,19;UBERON:0008836,2.24e-09,19;UBERON:0005911,2.61e-09,82;UBERON:0002046,3.04e-09,5;UBERON:0004117,3.04e-09,5;UBERON:0007689,3.04e-09,5;UBERON:0007123,3.04e-09,5;UBERON:0003091,3.04e-09,5;UBERON:0002530,3.43e-08,59;UBERON:0000949,3.72e-08,45;UBERON:0004921,1.52e-07,118;UBERON:0001041,6.86e-07,87 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,17.7457048750563,7.86261773342101,11.8157981336281,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0.116210378459959,0,1.80455823272956,0.184161977871793,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.330569830721956,1.34533047155574,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,2.14825409610731,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0.461701551022782,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.0967563312890851,0,0.0821154570532092,1.26085721434945,0,0.90392296312213,0,0,0,0.195551382734803,0.160317640503067,1.06726497369676,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,7.91382061861645,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.318593534327405,0.899606224327209,0,0.414706207840855,0,0,0.150257608997218,0.761610424337591,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.453411851024545,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0.0852134047591577,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,3.24131464053368,0,0,0,0.235676547101626,0,0,0,0,0,0.322289439867886,0,0.892769693028288,0,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.23806443146374,0,0,1.56984607612859,0,0,0.217716747896961,0.684466602170562,1.34704106029175,1.43444410785353,0.99798106963804,0,0,0,0.359300808426348,0,0,0.406896178315738,0,0,0 | |||
|short_description=p12@SLC35C1 | |||
}} |
Revision as of 07:28, 11 January 2014
Short description: | p12@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC35C1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 39bp_to_ENST00000314134_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | Q96A29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.99e-15 | 25 |
anatomical boundary | 4.99e-15 | 25 |
hepatobiliary system | 4.99e-15 | 25 |
foregut-midgut junction | 4.99e-15 | 25 |
septum transversum | 4.99e-15 | 25 |
gut epithelium | 9.64e-15 | 54 |
hepatic diverticulum | 3.28e-12 | 22 |
liver primordium | 3.28e-12 | 22 |
tonsil | 9.61e-12 | 1 |
mucosa-associated lymphoid tissue | 9.61e-12 | 1 |
lymphoid tissue | 9.61e-12 | 1 |
tonsillar ring | 9.61e-12 | 1 |
digestive tract diverticulum | 1.13e-11 | 23 |
endoderm-derived structure | 9.53e-11 | 160 |
endoderm | 9.53e-11 | 160 |
presumptive endoderm | 9.53e-11 | 160 |
epithelial sac | 9.90e-11 | 25 |
endocrine gland | 1.31e-10 | 35 |
sac | 2.59e-10 | 26 |
digestive system | 2.81e-10 | 145 |
digestive tract | 2.81e-10 | 145 |
primitive gut | 2.81e-10 | 145 |
liver | 2.24e-09 | 19 |
digestive gland | 2.24e-09 | 19 |
liver bud | 2.24e-09 | 19 |
endo-epithelium | 2.61e-09 | 82 |
thyroid gland | 3.04e-09 | 5 |
pharyngeal pouch | 3.04e-09 | 5 |
thyroid diverticulum | 3.04e-09 | 5 |
pharyngeal pouch 2 | 3.04e-09 | 5 |
thyroid primordium | 3.04e-09 | 5 |
gland | 3.43e-08 | 59 |
endocrine system | 3.72e-08 | 45 |
subdivision of digestive tract | 1.52e-07 | 118 |
foregut | 6.86e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.32e-11 | 1 |