FFCP PHASE1:Hg19::chr11:74408877..74408901,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24168 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-138bp_to_ENST00000529912_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_CHRDL2_5end | |||
|id=chr11:74408877..74408901,- | |||
|ontology_enrichment_celltype=CL:0002150!1.93e-15!3;CL:0000861!1.93e-15!3;CL:0000181!3.77e-10!12;CL:0000417!3.77e-10!12;CL:0000668!3.77e-10!12;CL:0000414!3.77e-10!12;CL:0000412!3.77e-10!12;CL:0000182!3.77e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.86e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.86e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.67e-21;1!UBERON:0007297;3.18e-11;2!UBERON:0004161;3.14e-08;11!UBERON:0009497;4.26e-07;13 | |||
|ontology_enrichment_disease=DOID:305!1.00e-12!106;DOID:0050687!2.63e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.72e-32!9;UBERON:0004921!4.70e-18!129;UBERON:0004185!4.70e-18!129;UBERON:0001041!3.45e-16!98;UBERON:0008947!5.01e-15!38;UBERON:0003258!5.01e-15!38;UBERON:0001557!2.15e-14!19;UBERON:0001007!4.72e-14!155;UBERON:0001555!4.72e-14!155;UBERON:0007026!4.72e-14!155;UBERON:0000077!1.25e-13!130;UBERON:0004119!2.07e-12!169;UBERON:0000925!2.07e-12!169;UBERON:0006595!2.07e-12!169;UBERON:0000065!4.47e-10!53;UBERON:0008835!5.96e-10!22;UBERON:0003894!5.96e-10!22;UBERON:0003104!7.66e-10!238;UBERON:0009142!7.66e-10!238;UBERON:0009854!1.78e-09!23;UBERON:0002107!7.77e-09!19;UBERON:0006925!7.77e-09!19;UBERON:0008836!7.77e-09!19;UBERON:0005177!7.94e-09!107;UBERON:0007499!1.23e-08!25;UBERON:0009497!1.23e-08!25;UBERON:0000015!1.23e-08!25;UBERON:0002423!1.23e-08!25;UBERON:0006235!1.23e-08!25;UBERON:0004161!1.23e-08!25;UBERON:0001048!1.73e-08!168;UBERON:0005172!2.74e-08!55;UBERON:0005173!2.74e-08!55;UBERON:0009856!2.89e-08!26;UBERON:0006947!1.84e-07!3;UBERON:0004054!1.84e-07!3;UBERON:0002417!2.90e-07!61;UBERON:0000916!2.90e-07!61;UBERON:0000481!3.26e-07!347;UBERON:0001004!8.54e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-26;19!UBERON:0006925;1.88e-26;19!UBERON:0000998;4.67e-21;1!UBERON:0006868;4.67e-21;1!UBERON:0002171;8.53e-21;1!UBERON:0006518;8.53e-21;1!UBERON:0008949;8.53e-21;1!UBERON:0000101;8.53e-21;1!UBERON:0002167;8.53e-21;1!UBERON:0002423;3.62e-20;25!UBERON:0002365;7.64e-17;31!UBERON:0002330;7.64e-17;31!UBERON:0002368;1.61e-13;33!UBERON:0000949;1.09e-08;43!UBERON:0002530;3.19e-08;57!UBERON:0005172;3.52e-08;52!UBERON:0005173;3.52e-08;52!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-26,19;UBERON:0006925,1.88e-26,19;UBERON:0008836,1.88e-26,19;UBERON:0008835,6.97e-23,22;UBERON:0003894,6.97e-23,22;UBERON:0009854,6.71e-22,23;UBERON:0000998,5.16e-21,1;UBERON:0006868,5.16e-21,1;UBERON:0002171,9.43e-21,1;UBERON:0006518,9.43e-21,1;UBERON:0008949,9.43e-21,1;UBERON:0000101,9.43e-21,1;UBERON:0002167,9.43e-21,1;UBERON:0007499,3.62e-20,25;UBERON:0009497,3.62e-20,25;UBERON:0000015,3.62e-20,25;UBERON:0002423,3.62e-20,25;UBERON:0006235,3.62e-20,25;UBERON:0004161,3.62e-20,25;UBERON:0009856,2.11e-19,26;UBERON:0002365,2.63e-16,31;UBERON:0002330,2.63e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0005172,2.86e-13,54;UBERON:0005173,2.86e-13,54;UBERON:0002530,3.85e-12,59;UBERON:0002417,6.16e-12,60;UBERON:0000916,6.16e-12,60;UBERON:0000949,2.79e-11,45;UBERON:0005177,1.97e-09,101;UBERON:0003929,2.04e-09,54;UBERON:0005911,1.10e-08,82;UBERON:0009569,1.78e-08,112;UBERON:0001041,3.54e-08,87;UBERON:0006947,6.78e-08,3;UBERON:0004054,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,0,35.4914097501126,56.0211513506247,15.9513274803979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83837029449262,3.58137653722309,2.38134825454307,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5672672641828,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,22.2759395190685,0,0,0,0,0,0.320362237703084,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CHRDL2 | |||
}} |
Revision as of 09:24, 11 January 2014
Short description: | p4@CHRDL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHRDL2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -138bp_to_ENST00000529912_5end |
EntrezGene: | CHRDL2 |
HGNC: | 24168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.86e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-26 | 19 |
digestive gland | 1.88e-26 | 19 |
liver bud | 1.88e-26 | 19 |
hepatic diverticulum | 6.97e-23 | 22 |
liver primordium | 6.97e-23 | 22 |
digestive tract diverticulum | 6.71e-22 | 23 |
seminal vesicle | 5.16e-21 | 1 |
seminal fluid secreting gland | 5.16e-21 | 1 |
lower lobe of right lung | 9.43e-21 | 1 |
right lung lobe | 9.43e-21 | 1 |
lower lobe of lung | 9.43e-21 | 1 |
lobe of lung | 9.43e-21 | 1 |
right lung | 9.43e-21 | 1 |
epithelial sac | 3.62e-20 | 25 |
epithelium of foregut-midgut junction | 3.62e-20 | 25 |
anatomical boundary | 3.62e-20 | 25 |
hepatobiliary system | 3.62e-20 | 25 |
foregut-midgut junction | 3.62e-20 | 25 |
septum transversum | 3.62e-20 | 25 |
sac | 2.11e-19 | 26 |
exocrine gland | 2.63e-16 | 31 |
exocrine system | 2.63e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
abdomen element | 2.86e-13 | 54 |
abdominal segment element | 2.86e-13 | 54 |
gland | 3.85e-12 | 59 |
abdominal segment of trunk | 6.16e-12 | 60 |
abdomen | 6.16e-12 | 60 |
endocrine system | 2.79e-11 | 45 |
trunk region element | 1.97e-09 | 101 |
gut epithelium | 2.04e-09 | 54 |
endo-epithelium | 1.10e-08 | 82 |
subdivision of trunk | 1.78e-08 | 112 |
foregut | 3.54e-08 | 87 |
male genital duct | 6.78e-08 | 3 |
internal male genitalia | 6.78e-08 | 3 |