FFCP PHASE1:Hg19::chr12:53344266..53344294,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6430 | |||
|TSSclassifier=not | |||
|UniProt=P05783 | |||
|association_with_transcript=-333bp_to_X12876_5end | |||
|description=CAGE_peak_10_at_KRT18_5end | |||
|id=chr12:53344266..53344294,+ | |||
|ontology_enrichment_celltype=CL:0000077!4.09e-19!19;CL:0000066!1.36e-15!254;CL:0002541!2.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.90e-36;19!CL:0002097;1.07e-22;2!CL:0000322;1.05e-15;3!CL:0000174;1.77e-15;3!CL:0000511;3.08e-12;1!CL:0002625;3.08e-12;1!CL:0000216;3.08e-12;1!CL:0000213;7.68e-07;58!CL:0000215;7.68e-07;58!CL:1000415;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.59e-36,19;CL:0002097,1.07e-22,2;CL:0000322,1.06e-15,3;CL:0000174,1.77e-15,3;CL:0000511,2.20e-12,1;CL:0002625,2.20e-12,1;CL:0000216,2.20e-12,1;CL:0000213,2.41e-11,58;CL:0000215,2.41e-11,58;CL:0000076,2.26e-10,63;CL:0000066,4.77e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.41e-17!25;DOID:0050687!3.80e-16!143;DOID:305!4.10e-15!106;DOID:162!2.20e-11!235;DOID:14566!6.92e-11!239;DOID:7!4.22e-08!39;DOID:170!9.45e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.15e-25;4!DOID:1612;1.15e-25;4!DOID:170;6.42e-17;6!DOID:299;2.03e-07;25!DOID:4074;9.53e-07;2!DOID:4905;9.53e-07;2!DOID:3910;9.53e-07;2!DOID:3498;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.10e-25,4;DOID:1612,1.10e-25,4;DOID:170,5.16e-17,6;DOID:305,4.21e-09,106;DOID:299,1.99e-07,25;DOID:4074,7.61e-07,2;DOID:4905,7.61e-07,2;DOID:3498,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.42e-08!11;UBERON:0006876!1.42e-08!11;UBERON:0000488!2.41e-08!4;UBERON:0002294!2.79e-08!7;UBERON:0001173!2.79e-08!7;UBERON:0004912!2.79e-08!7;UBERON:0000476!2.23e-07!3;UBERON:0000920!2.23e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004821;1.05e-15;3!UBERON:0007499;1.05e-15;3!UBERON:0003215;1.05e-15;3!UBERON:0010368;1.05e-15;3!UBERON:0009911;1.05e-15;3!UBERON:0002299;1.05e-15;3!UBERON:0006524;1.05e-15;3!UBERON:0008874;1.05e-15;3!UBERON:0002169;1.05e-15;3!UBERON:0004894;1.05e-15;3!UBERON:0002369;1.77e-15;3!UBERON:0001235;1.77e-15;3!UBERON:0006858;1.77e-15;3!UBERON:0001136;3.08e-12;1!UBERON:0001343;3.08e-12;1!UBERON:0004910;3.08e-12;1!UBERON:0004813;3.08e-12;1!UBERON:0009856;5.10e-12;4!UBERON:0000310;1.22e-10;10!UBERON:0001443;1.01e-09;11!UBERON:0004903;9.53e-07;2!UBERON:0004909;9.53e-07;2!UBERON:0002173;9.53e-07;2!UBERON:0002186;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004821,1.06e-15,3;UBERON:0003215,1.06e-15,3;UBERON:0010368,1.06e-15,3;UBERON:0009911,1.06e-15,3;UBERON:0002299,1.06e-15,3;UBERON:0006524,1.06e-15,3;UBERON:0008874,1.06e-15,3;UBERON:0002169,1.06e-15,3;UBERON:0004894,1.06e-15,3;UBERON:0002369,1.77e-15,3;UBERON:0001235,1.77e-15,3;UBERON:0006858,1.77e-15,3;UBERON:0001136,2.20e-12,1;UBERON:0001343,2.20e-12,1;UBERON:0004910,2.20e-12,1;UBERON:0005154,2.20e-12,1;UBERON:0005295,2.20e-12,1;UBERON:0004813,2.20e-12,1;UBERON:0005297,2.20e-12,1;UBERON:0005294,2.20e-12,1;UBERON:0010141,2.20e-12,1;UBERON:0005891,2.20e-12,1;UBERON:0000310,1.20e-10,10;UBERON:0001443,9.98e-10,11;UBERON:0009569,1.69e-08,112;UBERON:0000915,2.35e-07,52;UBERON:0004909,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.94880723801811,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,2.61460037580088,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0.902399225814824,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.176512253383001,0,0,0,0,0.391102765469606,1.04206466326994,0,4.99524023955326,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.04644169735036,0,0,0,0,0,0,0,0,0,1.34833881285112,1.28664954824955,0.260994291965212,0,0.231522474323834,0,0.537266523244462,2.47041157728778,2.19284049578707,0.530067437837643,4.43702288023104,0.337884881306145,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.687051635306701,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p10@KRT18 | |||
}} |
Revision as of 13:40, 11 January 2014
Short description: | p10@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_KRT18_5end |
Coexpression cluster: | NA |
Association with transcript: | -333bp_to_X12876_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | P05783 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.59e-36 | 19 |
cortical cell of adrenal gland | 1.07e-22 | 2 |
pneumocyte | 1.06e-15 | 3 |
steroid hormone secreting cell | 1.77e-15 | 3 |
androgen binding protein secreting cell | 2.20e-12 | 1 |
seminiferous tubule epithelial cell | 2.20e-12 | 1 |
Sertoli cell | 2.20e-12 | 1 |
lining cell | 2.41e-11 | 58 |
barrier cell | 2.41e-11 | 58 |
squamous epithelial cell | 2.26e-10 | 63 |
epithelial cell | 4.77e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
pulmonary alveolus epithelium | 1.06e-15 | 3 |
alveolus | 1.06e-15 | 3 |
pulmonary lobule | 1.06e-15 | 3 |
lobule | 1.06e-15 | 3 |
alveolus of lung | 1.06e-15 | 3 |
alveolar system | 1.06e-15 | 3 |
pulmonary acinus | 1.06e-15 | 3 |
alveolar sac | 1.06e-15 | 3 |
alveolar wall | 1.06e-15 | 3 |
adrenal gland | 1.77e-15 | 3 |
adrenal cortex | 1.77e-15 | 3 |
adrenal/interrenal gland | 1.77e-15 | 3 |
mesothelium | 2.20e-12 | 1 |
seminiferous tubule of testis | 2.20e-12 | 1 |
epithelium of male gonad | 2.20e-12 | 1 |
epithelial cord | 2.20e-12 | 1 |
sex cord | 2.20e-12 | 1 |
seminiferous tubule epithelium | 2.20e-12 | 1 |
testis sex cord | 2.20e-12 | 1 |
genital ridge | 2.20e-12 | 1 |
primitive sex cord of indifferent gonad | 2.20e-12 | 1 |
coelomic epithelium | 2.20e-12 | 1 |
breast | 1.20e-10 | 10 |
chest | 9.98e-10 | 11 |
subdivision of trunk | 1.69e-08 | 112 |
thoracic segment of trunk | 2.35e-07 | 52 |
epithelium of gonad | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.10e-25 | 4 |
breast cancer | 1.10e-25 | 4 |
endocrine gland cancer | 5.16e-17 | 6 |
carcinoma | 4.21e-09 | 106 |
adenocarcinoma | 1.99e-07 | 25 |
pancreas adenocarcinoma | 7.61e-07 | 2 |
pancreatic carcinoma | 7.61e-07 | 2 |
pancreatic ductal adenocarcinoma | 7.61e-07 | 2 |