FFCP PHASE1:Hg19::chr13:107029290..107029313,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42809 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=150bp_to_ENST00000444865_5end | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_3_at_LINC00460_5end | |||
|id=chr13:107029290..107029313,+ | |||
|ontology_enrichment_celltype=CL:0002178!4.27e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.78e-15;2!CL:0002178;6.73e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.05e-15,2;CL:0002178,6.73e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.78e-29;1!DOID:3493;1.15e-15;2!DOID:4231;1.78e-15;2!DOID:1907;1.78e-15;2!DOID:4929;2.55e-15;2!DOID:3119;4.29e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.78e-29,1;DOID:3493,1.15e-15,2;DOID:4231,1.54e-15,2;DOID:1907,1.54e-15,2;DOID:4929,2.37e-15,2;DOID:3119,4.21e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.64e-29;1!UBERON:0003703;3.64e-29;1!UBERON:0001174;3.64e-29;1!UBERON:0004914;3.64e-29;1!UBERON:0002294;4.54e-17;7!UBERON:0001173;4.54e-17;7!UBERON:0002423;7.04e-11;25!UBERON:0002110;8.99e-11;3!UBERON:0002114;1.14e-10;2!UBERON:0002394;2.52e-08;4!UBERON:0003928;2.52e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0002108;6.58e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.16e-29,1;UBERON:0003703,3.16e-29,1;UBERON:0001174,3.16e-29,1;UBERON:0004914,3.16e-29,1;UBERON:0002294,1.69e-13,9;UBERON:0001173,1.69e-13,9;UBERON:0004912,1.69e-13,9;UBERON:0009497,7.16e-11,25;UBERON:0000015,7.16e-11,25;UBERON:0002423,7.16e-11,25;UBERON:0006235,7.16e-11,25;UBERON:0004161,7.16e-11,25;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0002114,1.09e-10,2;UBERON:0002108,6.39e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,2.16428814679141,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,4.91216002832582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.163771917510097,1.33070477595341,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,2.22934412268644,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,11.0909763985225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976839223331694,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LINC00460 | |||
}} |
Revision as of 18:34, 11 January 2014
Short description: | p3@LINC00460 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LINC00460_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 150bp_to_ENST00000444865_5end |
EntrezGene: | NA |
HGNC: | 42809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.05e-15 | 2 |
epithelial cell of stomach | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.16e-29 | 1 |
extrahepatic bile duct | 3.16e-29 | 1 |
common bile duct | 3.16e-29 | 1 |
duodenal papilla | 3.16e-29 | 1 |
biliary system | 1.69e-13 | 9 |
biliary tree | 1.69e-13 | 9 |
biliary bud | 1.69e-13 | 9 |
epithelium of foregut-midgut junction | 7.16e-11 | 25 |
anatomical boundary | 7.16e-11 | 25 |
hepatobiliary system | 7.16e-11 | 25 |
foregut-midgut junction | 7.16e-11 | 25 |
septum transversum | 7.16e-11 | 25 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
duodenum | 1.09e-10 | 2 |
small intestine | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.78e-29 | 1 |
signet ring cell adenocarcinoma | 1.15e-15 | 2 |
histiocytoma | 1.54e-15 | 2 |
malignant fibroxanthoma | 1.54e-15 | 2 |
tubular adenocarcinoma | 2.37e-15 | 2 |
gastrointestinal system cancer | 4.21e-09 | 14 |