FFCP PHASE1:Hg19::chr14:52066714..52066739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000556617_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_1_at_ENST00000556617_5end | |||
|id=chr14:52066714..52066739,- | |||
|ontology_enrichment_celltype=CL:0002580!5.96e-13!3;CL:0002195!6.48e-10!2;CL:0002571!6.48e-10!2;CL:1000487!3.36e-09!2;CL:0002622!6.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002195;1.93e-07;2!CL:0002571;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.40e-07,2;CL:0002571,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.24e-14;1!UBERON:0006242;1.33e-13;1!UBERON:0007297;1.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001046!2.15e-17!19;UBERON:0003101!1.34e-14!22;UBERON:0000079!1.34e-14!22;UBERON:0000162!1.79e-14!14;UBERON:0001353!1.79e-14!14;UBERON:0000163!1.79e-14!14;UBERON:0006866!1.79e-14!14;UBERON:0000164!1.79e-14!14;UBERON:0000931!1.79e-14!14;UBERON:0006947!3.61e-14!3;UBERON:0004054!3.61e-14!3;UBERON:0004122!1.92e-13!15;UBERON:0005156!2.20e-13!59;UBERON:0000990!2.20e-13!59;UBERON:0003937!1.41e-12!12;UBERON:0005399!1.41e-12!12;UBERON:0005904!9.66e-11!4;UBERON:0000059!3.01e-10!11;UBERON:0004175!3.43e-10!25;UBERON:0002367!9.80e-10!11;UBERON:0010147!9.80e-10!11;UBERON:0009846!9.80e-10!11;UBERON:0003353!9.80e-10!11;UBERON:0004902!9.80e-10!11;UBERON:0003820!9.80e-10!11;UBERON:0009847!9.80e-10!11;UBERON:0001155!2.86e-08!9;UBERON:0003064!4.77e-08!37;UBERON:0004921!9.46e-08!129;UBERON:0004185!9.46e-08!129;UBERON:0003133!2.31e-07!48;UBERON:0007023!3.17e-07!115;UBERON:0000160!6.53e-07!27;UBERON:0000310!9.65e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.70e-18;11!UBERON:0006947;2.71e-17;3!UBERON:0004054;2.71e-17;3!UBERON:0006834;3.28e-14;1!UBERON:0005795;4.53e-14;1!UBERON:0001154;6.24e-14;1!UBERON:0001153;6.24e-14;1!UBERON:0009854;6.24e-14;1!UBERON:0001000;1.33e-13;1!UBERON:0001301;1.33e-13;1!UBERON:0005352;1.33e-13;1!UBERON:0005904;3.21e-13;4!UBERON:0001155;4.50e-13;9!UBERON:0000160;2.05e-11;17!UBERON:0004907;4.22e-11;5!UBERON:0004175;8.01e-10;21!UBERON:0003101;3.11e-09;22!UBERON:0000079;3.11e-09;22!UBERON:0005409;5.55e-09;22!UBERON:0001255;1.93e-07;2!UBERON:0001556;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.45e-18,11;UBERON:0006947,2.71e-17,3;UBERON:0004054,2.71e-17,3;UBERON:0001046,2.04e-16,19;UBERON:0006834,3.08e-14,1;UBERON:0001154,7.55e-14,1;UBERON:0001153,7.55e-14,1;UBERON:0001045,7.55e-14,1;UBERON:0001301,1.25e-13,1;UBERON:0001000,1.42e-13,1;UBERON:0005352,1.42e-13,1;UBERON:0005904,3.21e-13,4;UBERON:0001155,3.90e-13,9;UBERON:0000160,1.86e-11,17;UBERON:0004907,4.55e-11,5;UBERON:0005156,8.89e-10,59;UBERON:0000990,8.89e-10,59;UBERON:0007023,1.15e-09,114;UBERON:0003101,2.91e-09,22;UBERON:0000079,2.91e-09,22;UBERON:0000162,1.38e-08,14;UBERON:0001353,1.38e-08,14;UBERON:0000163,1.38e-08,14;UBERON:0006866,1.38e-08,14;UBERON:0000164,1.38e-08,14;UBERON:0000931,1.38e-08,14;UBERON:0004175,2.77e-08,25;UBERON:0004122,4.77e-08,15;UBERON:0005409,5.37e-08,25;UBERON:0001255,1.75e-07,2;UBERON:0001556,1.75e-07,2;UBERON:0003064,2.47e-07,28 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35762335895883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.68888668898764,0,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5460723810632,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,2.4441205797345,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,1.72684804271131,0,0,8.21842848458546,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6367356203674,6.91723503136755,0.665756774185513,0,0 | |||
|short_description=p1@ENST00000556617 | |||
}} |
Revision as of 20:04, 11 January 2014
Short description: | p1@ENST00000556617 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556617_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | -44bp_to_ENST00000556617_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.40e-07 | 2 |
hepatic mesenchymal stem cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.45e-18 | 11 |
male genital duct | 2.71e-17 | 3 |
internal male genitalia | 2.71e-17 | 3 |
hindgut | 2.04e-16 | 19 |
uterus or analog | 3.08e-14 | 1 |
vermiform appendix | 7.55e-14 | 1 |
caecum | 7.55e-14 | 1 |
midgut | 7.55e-14 | 1 |
epididymis | 1.25e-13 | 1 |
vas deferens | 1.42e-13 | 1 |
spermatic cord | 1.42e-13 | 1 |
duct of male reproductive system | 3.21e-13 | 4 |
colon | 3.90e-13 | 9 |
intestine | 1.86e-11 | 17 |
lower digestive tract | 4.55e-11 | 5 |
reproductive structure | 8.89e-10 | 59 |
reproductive system | 8.89e-10 | 59 |
adult organism | 1.15e-09 | 114 |
male organism | 2.91e-09 | 22 |
male reproductive system | 2.91e-09 | 22 |
cloaca | 1.38e-08 | 14 |
anal region | 1.38e-08 | 14 |
embryonic cloaca | 1.38e-08 | 14 |
terminal part of digestive tract | 1.38e-08 | 14 |
primitive urogenital sinus | 1.38e-08 | 14 |
proctodeum | 1.38e-08 | 14 |
internal genitalia | 2.77e-08 | 25 |
genitourinary system | 4.77e-08 | 15 |
gastrointestinal system | 5.37e-08 | 25 |
urinary bladder | 1.75e-07 | 2 |
lower urinary tract | 1.75e-07 | 2 |
intermediate mesoderm | 2.47e-07 | 28 |