FFCP PHASE1:Hg19::chr16:11720992..11721005,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr16:11720992..11721005,- | |||
|id=chr16:11720992..11721005,- | |||
|ontology_enrichment_celltype=CL:0000840!3.37e-16!5;CL:0001029!3.37e-16!5;CL:0000990!7.70e-11!8;CL:0002009!3.11e-10!65;CL:0000557!3.44e-09!71;CL:0000451!6.97e-09!10;CL:0002194!7.29e-09!63;CL:0000576!7.29e-09!63;CL:0000040!7.29e-09!63;CL:0000559!7.29e-09!63;CL:0000839!8.59e-08!70;CL:0000766!4.95e-07!76;CL:0000083!8.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.55e-33;5!CL:0000990;1.21e-22;8!CL:0000451;1.14e-18;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.64e-33,5;CL:0001029,1.64e-33,5;CL:0000990,1.26e-22,8;CL:0000451,1.17e-18,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!1.46e-07!1;DOID:1799!4.31e-07!1;DOID:10165!4.31e-07!1;DOID:1798!4.31e-07!1;DOID:1793!8.70e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.07e-23;1!DOID:3350;1.48e-12;2!DOID:4468;2.07e-12;2!DOID:0060058;9.87e-10;10!DOID:1749;3.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.07e-23,1;DOID:3350,1.48e-12,2;DOID:4468,2.07e-12,2;DOID:0060058,9.24e-10,10;DOID:1749,3.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.43e-08!80;UBERON:0002134!2.67e-07!1;UBERON:0005208!2.67e-07!1;UBERON:0005946!2.67e-07!1;UBERON:0005965!2.67e-07!1;UBERON:0002078!2.67e-07!1;UBERON:0001474!3.22e-07!86;UBERON:0001154!4.06e-07!1;UBERON:0001153!4.06e-07!1;UBERON:0002193!4.24e-07!112;UBERON:0003343!5.30e-07!4;UBERON:0004785!5.30e-07!4;UBERON:0002372!5.78e-07!1;UBERON:0001961!5.78e-07!1;UBERON:0001744!5.78e-07!1;UBERON:0001735!5.78e-07!1;UBERON:0002405!7.58e-07!115;UBERON:0002390!7.72e-07!102;UBERON:0003061!7.72e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.42e-23;4!UBERON:0004785;6.42e-23;4!UBERON:0000974;1.22e-15;6!UBERON:0003729;9.84e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.18e-23,4;UBERON:0004785,7.18e-23,4;UBERON:0000974,9.24e-10,10;UBERON:0003729,1.02e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,2.08955684759121,5.98310822334893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45175445410452,0,0,0,0,0,0,0,1.97764649072111,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16497096792041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7269664028996,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80923820655025,1.1796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:11720992..11721005,- | |||
}} |
Revision as of 02:23, 12 January 2014
Short description: | p@chr16:11720992..11721005, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:11720992..11721005, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.64e-33 | 5 |
common dendritic progenitor | 1.64e-33 | 5 |
conventional dendritic cell | 1.26e-22 | 8 |
dendritic cell | 1.17e-18 | 10 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.18e-23 | 4 |
respiratory system mucosa | 7.18e-23 | 4 |
neck | 9.24e-10 | 10 |
mouth mucosa | 1.02e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.07e-23 | 1 |
mesenchymal cell neoplasm | 1.48e-12 | 2 |
clear cell adenocarcinoma | 2.07e-12 | 2 |
lymphoma | 9.24e-10 | 10 |
squamous cell carcinoma | 3.14e-07 | 14 |