FFCP PHASE1:Hg19::chr17:56355384..56355414,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_at_chr17:56355384..56355414,- | |||
|id=chr17:56355384..56355414,- | |||
|ontology_enrichment_celltype=CL:0002057!2.78e-47!42;CL:0000860!1.08e-43!45;CL:0002194!2.84e-31!63;CL:0000576!2.84e-31!63;CL:0000040!2.84e-31!63;CL:0000559!2.84e-31!63;CL:0002009!4.03e-30!65;CL:0000557!1.34e-29!71;CL:0000766!1.45e-29!76;CL:0000763!4.24e-29!112;CL:0000049!4.24e-29!112;CL:0000839!1.58e-27!70;CL:0000037!2.60e-24!172;CL:0000566!2.60e-24!172;CL:0000988!1.86e-22!182;CL:0002032!3.93e-21!165;CL:0000837!3.93e-21!165;CL:0002087!7.41e-21!119;CL:0000738!1.62e-19!140;CL:0002031!9.53e-17!124;CL:0000134!6.80e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002032;7.46e-16;1!CL:0000557;7.46e-16;1!CL:0000037;2.95e-15;1!CL:0001024;2.95e-15;1!CL:0000763;2.13e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,2.38e-15,1;CL:0000763,5.02e-12,108;CL:0000049,5.02e-12,108;CL:0000037,5.28e-09,168;CL:0000988,1.75e-08,177;CL:0002032,9.94e-08,161;CL:0000837,9.94e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:225;9.99e-16;1!DOID:8692;1.35e-11;31!DOID:74;1.61e-08;2!DOID:1240;1.04e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:225,9.99e-16,1;DOID:8692,1.30e-11,31;DOID:1240,3.18e-09,39;DOID:74,1.61e-08,2;DOID:2531,4.91e-07,51;DOID:0060083,4.91e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.02e-34!102;UBERON:0003061!5.02e-34!102;UBERON:0002193!3.04e-30!112;UBERON:0002371!7.69e-28!80;UBERON:0002405!1.74e-25!115;UBERON:0001474!2.00e-25!86;UBERON:0004765!2.45e-22!101;UBERON:0001434!2.45e-22!101;UBERON:0003081!1.43e-13!216;UBERON:0002204!9.57e-12!167;UBERON:0004177!6.59e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,2.70852973188684,0.564727018627814,0,0.224723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,1.01095768031846,0.901061357049038,0.803627933485401,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,6.32121803460185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7235358192189,0,2.9670508274315,16.4513890561674,0,0,0,10.6953844811255,4.25846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4971929260275,0,0,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.10857145675471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:56355384..56355414,- | |||
}} |
Revision as of 16:29, 20 January 2014
Short description: | p@chr17:56355384..56355414, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56355384..56355414, - |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 2.38e-15 | 1 |
myeloid cell | 5.02e-12 | 108 |
common myeloid progenitor | 5.02e-12 | 108 |
hematopoietic stem cell | 5.28e-09 | 168 |
hematopoietic cell | 1.75e-08 | 177 |
hematopoietic oligopotent progenitor cell | 9.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.94e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
syndrome | 9.99e-16 | 1 |
myeloid leukemia | 1.30e-11 | 31 |
leukemia | 3.18e-09 | 39 |
hematopoietic system disease | 1.61e-08 | 2 |
hematologic cancer | 4.91e-07 | 51 |
immune system cancer | 4.91e-07 | 51 |