FFCP PHASE1:Hg19::chr18:48176556..48176567,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr18:48176556..48176567,+ | |||
|id=chr18:48176556..48176567,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.33e-29;1!UBERON:0000358;1.78e-29;1!UBERON:0006241;1.09e-10;3!UBERON:0003057;1.09e-10;3!UBERON:0005062;2.43e-08;4!UBERON:0007284;2.43e-08;4 | |||
|ontology_enrichment_disease=DOID:114!2.03e-13!2;DOID:178!1.55e-07!1;DOID:326!1.55e-07!1;DOID:3978!1.55e-07!1;DOID:3394!1.55e-07!1;DOID:5844!1.55e-07!1;DOID:1287!4.07e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.13e-57;2!DOID:178;9.99e-30;1!DOID:326;9.99e-30;1!DOID:3978;9.99e-30;1!DOID:3394;9.99e-30;1!DOID:5844;9.99e-30;1!DOID:1287;1.78e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.13e-57,2;DOID:178,9.99e-30,1;DOID:326,9.99e-30,1;DOID:3978,9.99e-30,1;DOID:3394,9.99e-30,1;DOID:5844,9.99e-30,1;DOID:1287,1.78e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.82e-24!115;UBERON:0003075!2.54e-15!86;UBERON:0007284!2.54e-15!86;UBERON:0002346!1.72e-14!90;UBERON:0001049!5.57e-14!57;UBERON:0005068!5.57e-14!57;UBERON:0006241!5.57e-14!57;UBERON:0007135!5.57e-14!57;UBERON:0003076!2.64e-13!15;UBERON:0003057!2.64e-13!15;UBERON:0001873!1.36e-12!2;UBERON:0010122!1.36e-12!2;UBERON:0002298!1.44e-11!8;UBERON:0005743!2.23e-11!86;UBERON:0001017!2.24e-10!82;UBERON:0000073!4.85e-10!94;UBERON:0001016!4.85e-10!94;UBERON:0002616!2.23e-09!59;UBERON:0003978!6.16e-09!3;UBERON:0009751!6.16e-09!3;UBERON:0000946!6.16e-09!3;UBERON:0002523!6.16e-09!3;UBERON:0005983!6.16e-09!3;UBERON:0002165!6.16e-09!3;UBERON:0002062!6.16e-09!3;UBERON:0007280!6.16e-09!3;UBERON:0002240!7.48e-09!3;UBERON:0001896!1.02e-08!3;UBERON:0005290!1.02e-08!3;UBERON:0010096!1.02e-08!3;UBERON:0005383!1.10e-08!3;UBERON:0005382!1.10e-08!3;UBERON:0000988!2.45e-08!3;UBERON:0004733!9.50e-08!12;UBERON:0002028!9.50e-08!12;UBERON:0007277!9.50e-08!12;UBERON:0000955!1.28e-07!69;UBERON:0006238!1.28e-07!69;UBERON:0007100!1.45e-07!27;UBERON:0002084!1.65e-07!1;UBERON:0002082!1.65e-07!1;UBERON:0004706!1.65e-07!1;UBERON:0002135!1.98e-07!1;UBERON:0007029!2.23e-07!1;UBERON:0002146!3.20e-07!1;UBERON:0005623!3.20e-07!1;UBERON:0002336!3.60e-07!1;UBERON:0001018!3.60e-07!1;UBERON:0002473!3.60e-07!1;UBERON:0005340!3.60e-07!1;UBERON:0002316!3.60e-07!1;UBERON:0003544!3.60e-07!1;UBERON:0001020!3.60e-07!1;UBERON:0005970!3.60e-07!1;UBERON:0002437!3.60e-07!1;UBERON:0004732!3.70e-07!13;UBERON:0004121!5.52e-07!169;UBERON:0002581!5.78e-07!1;UBERON:0003103!6.81e-07!69;UBERON:0000924!9.60e-07!173;UBERON:0006601!9.60e-07!173;UBERON:0002363!9.73e-07!1;UBERON:0007647!9.73e-07!1;UBERON:0010115!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.33e-29;1!UBERON:0002082;1.33e-29;1!UBERON:0002135;3.16e-29;1!UBERON:0007100;1.43e-28;25!UBERON:0002133;2.37e-15;2!UBERON:0004151;8.17e-11;3!UBERON:0002240;1.09e-10;3!UBERON:0003978;1.09e-10;3!UBERON:0000946;1.09e-10;3!UBERON:0005174;1.09e-10;3!UBERON:0001137;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0002135,3.16e-29,1;UBERON:0007100,1.62e-26,27;UBERON:0002133,2.37e-15,2;UBERON:0003103,3.20e-15,68;UBERON:0004151,8.17e-11,3;UBERON:0003978,1.09e-10,3;UBERON:0009751,1.09e-10,3;UBERON:0000946,1.09e-10,3;UBERON:0002523,1.09e-10,3;UBERON:0005983,1.09e-10,3;UBERON:0002165,1.09e-10,3;UBERON:0002062,1.09e-10,3;UBERON:0007280,1.09e-10,3;UBERON:0002240,1.20e-10,3;UBERON:0005174,1.20e-10,3;UBERON:0001137,1.20e-10,3;UBERON:0007023,3.60e-09,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.458320848023367,0,5.79069101447074,17.1690419254628,1.78537165953498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0,0,0,0,0,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.606351566874658,0,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr18:48176556..48176567,+ | |||
}} |
Revision as of 19:21, 20 January 2014
Short description: | p@chr18:48176556..48176567, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:48176556..48176567, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.33e-29 | 1 |
cardiac ventricle | 1.33e-29 | 1 |
future cardiac ventricle | 1.33e-29 | 1 |
mitral valve | 3.16e-29 | 1 |
primary circulatory organ | 1.62e-26 | 27 |
atrioventricular valve | 2.37e-15 | 2 |
compound organ | 3.20e-15 | 68 |
cardiac chamber | 8.17e-11 | 3 |
valve | 1.09e-10 | 3 |
cardiac mesenchyme | 1.09e-10 | 3 |
cardial valve | 1.09e-10 | 3 |
tunica intima | 1.09e-10 | 3 |
heart layer | 1.09e-10 | 3 |
endocardium | 1.09e-10 | 3 |
endocardial cushion | 1.09e-10 | 3 |
presumptive endocardium | 1.09e-10 | 3 |
spinal cord | 1.20e-10 | 3 |
dorsal region element | 1.20e-10 | 3 |
dorsum | 1.20e-10 | 3 |
adult organism | 3.60e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.13e-57 | 2 |
vascular disease | 9.99e-30 | 1 |
ischemia | 9.99e-30 | 1 |
extrinsic cardiomyopathy | 9.99e-30 | 1 |
myocardial ischemia | 9.99e-30 | 1 |
myocardial infarction | 9.99e-30 | 1 |
cardiovascular system disease | 1.78e-29 | 4 |