FFCP PHASE1:Hg19::chr1:153029980..153029995,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11261 | |||
|TSSclassifier=not | |||
|UniProt=P35326 | |||
|association_with_transcript=0bp_to_NM_005988,uc001fbd.2_5end | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_SPRR2A_5end | |||
|id=chr1:153029980..153029995,- | |||
|ontology_enrichment_celltype=CL:0002076!3.77e-15!43;CL:0000066!2.44e-13!254;CL:0000223!1.63e-10!59;CL:0002159!1.83e-10!13;CL:0002368!6.83e-10!13;CL:0002251!1.67e-08!21;CL:0000622!5.61e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.63e-15;42!CL:0002368;1.79e-15;13!CL:0002159;4.79e-15;14!CL:0000622;1.05e-11;5!CL:0002251;4.37e-11;20!CL:0000154;1.16e-09;6!CL:0002202;1.08e-08;9!CL:0002632;1.08e-08;9!CL:0002166;4.08e-08;3!CL:0000244;4.19e-08;4!CL:0000731;4.19e-08;4!CL:0002621;5.25e-08;3!CL:0002328;1.20e-07;3!CL:0002623;1.46e-07;3!CL:0000307;1.61e-07;3!CL:0002077;3.56e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.67e-20,42;CL:0002368,1.80e-15,13;CL:0000066,2.37e-15,253;CL:0002159,4.80e-15,14;CL:0000223,1.38e-12,58;CL:0000622,1.05e-11,5;CL:0002251,3.99e-11,20;CL:0000154,1.16e-09,6;CL:0002202,1.07e-08,9;CL:0002632,1.07e-08,9;CL:0002077,2.09e-08,34;CL:0002166,4.09e-08,3;CL:0000244,4.28e-08,4;CL:0000731,4.28e-08,4;CL:0002621,5.25e-08,3;CL:0002328,1.20e-07,3;CL:0002623,1.46e-07,3;CL:0000068,1.60e-07,3;CL:0000069,1.60e-07,3;CL:0000307,1.60e-07,3;CL:0000377,1.60e-07,3;CL:0000076,3.48e-07,63;CL:0002321,4.43e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.61e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!6.08e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.34e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.56e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-12!169;UBERON:0000925!1.11e-12!169;UBERON:0006595!1.11e-12!169;UBERON:0001004!2.55e-11!72;UBERON:0000166!1.51e-10!21;UBERON:0000161!1.80e-09!35;UBERON:0000165!4.16e-08!28;UBERON:0000930!4.16e-08!28;UBERON:0001007!4.64e-08!155;UBERON:0001555!4.64e-08!155;UBERON:0007026!4.64e-08!155;UBERON:0005910!2.21e-07!6;UBERON:0000065!3.02e-07!53;UBERON:0000974!6.72e-07!10;UBERON:0000365!7.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.54e-11;28!UBERON:0000486;2.75e-10;12!UBERON:0000161;5.74e-10;19!UBERON:0000166;5.74e-10;19!UBERON:0000365;5.97e-10;5!UBERON:0007196;2.56e-08;15!UBERON:0001558;2.56e-08;15!UBERON:0005910;3.15e-08;6!UBERON:0001949;5.25e-08;3!UBERON:0003126;9.09e-08;7!UBERON:0001005;9.09e-08;7!UBERON:0004815;1.20e-07;3!UBERON:0002031;1.20e-07;3!UBERON:0000344;1.90e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.79e-12,22;UBERON:0001004,6.46e-12,74;UBERON:0000153,1.71e-10,62;UBERON:0007811,1.71e-10,62;UBERON:0004119,1.91e-10,160;UBERON:0000925,1.91e-10,160;UBERON:0006595,1.91e-10,160;UBERON:0000161,2.09e-10,36;UBERON:0000165,2.31e-10,29;UBERON:0000930,2.31e-10,29;UBERON:0003102,3.90e-10,99;UBERON:0000365,6.09e-10,5;UBERON:0000033,1.07e-08,56;UBERON:0007196,2.65e-08,15;UBERON:0001558,2.65e-08,15;UBERON:0005910,3.21e-08,6;UBERON:0001949,5.25e-08,3;UBERON:0003126,9.57e-08,7;UBERON:0001005,9.57e-08,7;UBERON:0004815,1.20e-07,3;UBERON:0002031,1.20e-07,3;UBERON:0000344,1.87e-07,20;UBERON:0001444,7.67e-07,49;UBERON:0008814,9.82e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0.764134057479513,0.410502947249729,0.236132343941038,0,0,0.154816123316076,118.605337957782,110.843778110396,143.83430995488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65939452896706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,7.13835961462534,270.671399201359,148.313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,121.670240547767,0,0,0,0,2.4826786753885,0.560677600142307,0,0,0,0,0,0,0,0,0,6.27519003698894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,573.018429629175,1256.54137756198,134.224550642054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.861942080005,210.191278591749,16.0846355858609,66.8488574044584,0,0,0,0,0,0,0,0,0,0,0,0,0,877.348686116232,172.181681403831,1702.29359258933,0.0895585227028483,0.581267877027924,0.766765358330422,0,0,0,0,0,0.507983154337352,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61727252471503,0.871533458600294,1.69954085009497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57818928615649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,194.567129621549,0,0,0,5.86559496779635,7.47048769912823,2.35304930753057,0,1.79437769117889,0,0,0,0,0,0,15.2925763827023,42.3848764553649,0,0,0,0,0,0,0,0,0,288.855565612075,156.014459048765,0,0,0,0,0,0,0,0.0852266274161009,0,93.0554073482307,19.7955769386059,21.3113229865955,42.1827946167643,0,0,0,0,2.12922412126809,0,0.74129687641568,0.143124886741991,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,90.2277006328059,181.518666495058,0,0,10.3484292250979,3.40805847909725,0,0,0,12.840157853325,0,0,0,0,0,78.3247997585668,105.237457259119,93.6462469807374,0,5.16606447205476,28.6401508634963,4.43430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0.329607748453519,0,3.38721580026819,0,0,0,0,0,0.808815160325942,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,1.0241410345695,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,413.809673018895,1325.92990427893,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0.995261931078505,0,0,0,0,0,0.134802265961354,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,55.0717273468802,1.30588809870604,0,0,0,0,0,3845.42052573285,0,2.71176888936639,0,0.19871461170299,0.0633107959558787,0.195551382734803,6.33254679987116,0.640358984218058,0,0,0,0,11.6684386370401,0,2.59263438078475,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,1.5452198671947,0,0,0,0,0,0,0,0,0,0,0,0,8.99895566206002,0,0.0607495566580247,27.8410790707391,0.86686278029118,0.472091293214983,0,0,0.575745591958336,0,0,0,0,0,0,0,2.54486814322951,0,0,0,0,0,0,0,0,0.533937062838473,0.78602152549833,0.414239055347196,0,0,0,15.9585314442545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.779441235357554,0.398594520940089,0.163565394255844,0,0,24.5122063096007,0,0,1.54993481694734,0,0,517.274419546506,33.5921720417805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,2.71330363699803,13.3902876920826,0.577628330751691,0,0,0,0,0,0,0,1.63771917510097,0,0,0,0,0,0,0,7.93937885422871,0,1.91643641459393,0,0,0,0,0.79832133146375,13.4823765440262,0,0,0.328863867814245,0,0,0,0,0.840816489941367,0,0,0,0.0714765441766563,0,0,0,0,29.2174791469882,62.4829626163857,831.585373162352,24.0927320939355,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.199882311849858,7.85637329864893,758.018184445306,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0,0,0,264.623371539117,2.85677317756488,1.35636710655613,0.496597714366863,48.440964634825,0.12729431655633,0.202117188958219,8567.15402974543,1508.906624485,2490.14010405533,802.643200549441,1.33064142618405,35.247615308552,0.106727345877715,0,0,0,51.5858894451696,354.406571313008,1.33151354837103,0,0 | |||
|short_description=p1@SPRR2A | |||
}} |
Revision as of 20:58, 10 January 2014
Short description: | p1@SPRR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR2A_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_NM_005988, uc001fbd.2_5end |
EntrezGene: | SPRR2A |
HGNC: | 11261 |
UniProt: | P35326 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.67e-20 | 42 |
respiratory epithelial cell | 1.80e-15 | 13 |
epithelial cell | 2.37e-15 | 253 |
general ecto-epithelial cell | 4.80e-15 | 14 |
endodermal cell | 1.38e-12 | 58 |
acinar cell | 1.05e-11 | 5 |
epithelial cell of alimentary canal | 3.99e-11 | 20 |
protein secreting cell | 1.16e-09 | 6 |
epithelial cell of tracheobronchial tree | 1.07e-08 | 9 |
epithelial cell of lower respiratory tract | 1.07e-08 | 9 |
ecto-epithelial cell | 2.09e-08 | 34 |
epithelial cell of Malassez | 4.09e-08 | 3 |
transitional epithelial cell | 4.28e-08 | 4 |
urothelial cell | 4.28e-08 | 4 |
gingival epithelial cell | 5.25e-08 | 3 |
bronchial epithelial cell | 1.20e-07 | 3 |
acinar cell of salivary gland | 1.46e-07 | 3 |
duct epithelial cell | 1.60e-07 | 3 |
branched duct epithelial cell | 1.60e-07 | 3 |
tracheal epithelial cell | 1.60e-07 | 3 |
tracheoblast | 1.60e-07 | 3 |
squamous epithelial cell | 3.48e-07 | 63 |
embryonic cell | 4.43e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.79e-12 | 22 |
respiratory system | 6.46e-12 | 74 |
anterior region of body | 1.71e-10 | 62 |
craniocervical region | 1.71e-10 | 62 |
endoderm-derived structure | 1.91e-10 | 160 |
endoderm | 1.91e-10 | 160 |
presumptive endoderm | 1.91e-10 | 160 |
orifice | 2.09e-10 | 36 |
mouth | 2.31e-10 | 29 |
stomodeum | 2.31e-10 | 29 |
surface structure | 3.90e-10 | 99 |
urothelium | 6.09e-10 | 5 |
head | 1.07e-08 | 56 |
tracheobronchial tree | 2.65e-08 | 15 |
lower respiratory tract | 2.65e-08 | 15 |
transitional epithelium | 3.21e-08 | 6 |
gingival epithelium | 5.25e-08 | 3 |
trachea | 9.57e-08 | 7 |
respiratory airway | 9.57e-08 | 7 |
lower respiratory tract epithelium | 1.20e-07 | 3 |
epithelium of bronchus | 1.20e-07 | 3 |
mucosa | 1.87e-07 | 20 |
subdivision of head | 7.67e-07 | 49 |
pharyngeal arch system | 9.82e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.56e-10 | 14 |