FFCP PHASE1:Hg19::chr1:199901345..199901380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:199901345..199901380,+ | |||
|id=chr1:199901345..199901380,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.66e-22!112;CL:0000049!4.66e-22!112;CL:0000037!2.22e-18!172;CL:0000566!2.22e-18!172;CL:0002032!2.21e-17!165;CL:0000837!2.21e-17!165;CL:0000988!4.41e-17!182;CL:0000839!1.93e-14!70;CL:0002057!4.56e-14!42;CL:0000860!4.80e-14!45;CL:0000766!1.04e-13!76;CL:0002194!2.14e-13!63;CL:0000576!2.14e-13!63;CL:0000040!2.14e-13!63;CL:0000559!2.14e-13!63;CL:0002009!1.36e-12!65;CL:0000557!3.50e-12!71;CL:0002087!3.70e-10!119;CL:0000738!2.48e-09!140;CL:0002031!2.71e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000174;1.04e-09;3!CL:0000083;1.15e-07;4!CL:0002097;4.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000174,1.17e-09,3;CL:0000763,3.62e-08,108;CL:0000049,3.62e-08,108;CL:0000083,1.01e-07,4;CL:0002097,4.94e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.07e-12!235;DOID:14566!5.56e-11!239;DOID:8692!2.57e-10!31;DOID:1240!1.48e-09!39;DOID:2531!2.65e-09!51;DOID:0060083!2.65e-09!51;DOID:0050687!3.81e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.92e-15;31!DOID:170;7.04e-13;6!DOID:1240;1.94e-10;39!DOID:2531;3.77e-08;51!DOID:0060083;3.77e-08;51!DOID:1793;1.15e-07;4!DOID:1749;1.45e-07;14!DOID:4929;2.50e-07;2!DOID:4074;3.04e-07;2!DOID:4905;3.04e-07;2!DOID:3498;3.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.35e-21,235;DOID:14566,7.03e-21,239;DOID:8692,4.97e-16,31;DOID:0050686,6.81e-15,137;DOID:1240,8.17e-14,39;DOID:170,7.07e-13,6;DOID:2531,8.26e-13,51;DOID:0060083,8.26e-13,51;DOID:305,3.83e-11,106;DOID:0050687,7.63e-11,143;DOID:1793,1.01e-07,4;DOID:1749,1.43e-07,14;DOID:4074,2.54e-07,2;DOID:4905,2.54e-07,2;DOID:4929,2.54e-07,2;DOID:3498,2.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-13!102;UBERON:0003061!1.70e-13!102;UBERON:0002193!2.10e-11!112;UBERON:0002371!4.25e-11!80;UBERON:0001474!2.01e-09!86;UBERON:0002405!6.23e-09!115;UBERON:0004765!8.01e-07!101;UBERON:0001434!8.01e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,2.05520307534393,1.10799081706375,0.601633342410425,0.434021741431704,0.671746422719773,0.647787332037959,1.54545340580512,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,1.1507695692886,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.199463657621632,1.70489900213078,1.16083695451434,0.56738522469114,0.622822248995575,0.502497330513487,0,0.65156653411535,0.605399502633369,0,1.26584954976354,0.422510572623884,0.637812899895131,0.209658645508376,0.673971786878971,0.300353785683013,1.6072558669708,0.855038231223746,0,0.365328307529268,0,0,0,0,0,1.14950487990897,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.831192346452549,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0.985326475791887,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.896681151948218,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,1.31555925987561,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,1.08006287447623,0.79312517629427,0,0,12.9871314469947,1.30062222588003,0.28853842595289,0,0,4.59032554295478,0.5745161103971,2.32840940996271,2.921597462471,3.93116049358842,0,0.313359791546046,0,6.26379577865932,0,0,2.12923118845163,0,0,0.447352215784832,0,2.54004524022652,2.50565556505718,7.38524393686274,1.6227340708559,0,38.0664913737194,1.8714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,3.40140231883657,0,0,7.18449277040819,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,1.65471377237555,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0.69169171316418,0.897576444097721,0.54323685961004,0,0,0,0,0.156980256395025,12.4658761425117,0.451191321234361,0.19606253431774,0.503464760927528,0,4.13235105348985,0,4.73375143661528,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0.547364367646998,13.6965233252463,2.91336455440911,0,0,0,0.31593289814244,0,0,0,0.661983911750998,3.45326210247948,0,0,0.277349346026277,0,7.74139939573583,0,0,1.0319161948297,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0,2.19267079434801,2.58328995213887,0,3.71547627196126,0,0.213452994739353,1.9980960958213,0,0.572682980829578,0,0,2.60930324687408,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0,0.202210631562555,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,4.92555124496034,0,0,0.879313402068495,0,0,0,1.53978154095896,3.52407511158336,0.106787412567695,0,0,0,0,0.243585196761792,21.065261506416,0,0.2506898940227,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,1.14186133417987,1.88212655758537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,2.11881813448034,5.14659819299822,0,0,0,1.95789363605174,0,0,0,0,0,0,0,0,1.51929978088691,0,0,0,0,0,0.245772908753719,7.8185485642692,0,1.28030075632969,2.75543967457305,5.67515953566836,0,0,0,0,0.215649622793364,0,0,0,0,0.247871528518004,0,0,2.20812886003509,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,6.9702867438238,1.38630799380406,0,0,0,0,0,0.781514011233092,0,0,4.5835386727284,0,0,0,0,0,0.548257766857182,0,0,2.04419884223352,0.535701835878287,0,0,0.227662191351298,0,0,0.342976018874837,0.0679697329768317,0,1.06374456795571,0.889851215136553,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,3.71972561178001,0.521574816907738,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0,0,0,0.237840181555137,0,0,4.52888530700021,0.385870790539723,0,0,0,0,0,0,0,0.169927114687817,0.281951753939561,0,0,16.6055162903262,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.186224142887574,0.448527450322454,0,0,0,0,0.26940821205835,0,0,0,0.213454691755431,0,5.4793373285018,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:199901345..199901380,+ | |||
}} |
Revision as of 23:11, 10 January 2014
Short description: | p@chr1:199901345..199901380, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:199901345..199901380, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
steroid hormone secreting cell | 1.17e-09 | 3 |
myeloid cell | 3.62e-08 | 108 |
common myeloid progenitor | 3.62e-08 | 108 |
epithelial cell of pancreas | 1.01e-07 | 4 |
cortical cell of adrenal gland | 4.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.35e-21 | 235 |
disease of cellular proliferation | 7.03e-21 | 239 |
myeloid leukemia | 4.97e-16 | 31 |
organ system cancer | 6.81e-15 | 137 |
leukemia | 8.17e-14 | 39 |
endocrine gland cancer | 7.07e-13 | 6 |
hematologic cancer | 8.26e-13 | 51 |
immune system cancer | 8.26e-13 | 51 |
carcinoma | 3.83e-11 | 106 |
cell type cancer | 7.63e-11 | 143 |
pancreatic cancer | 1.01e-07 | 4 |
squamous cell carcinoma | 1.43e-07 | 14 |
pancreas adenocarcinoma | 2.54e-07 | 2 |
pancreatic carcinoma | 2.54e-07 | 2 |
tubular adenocarcinoma | 2.54e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.54e-07 | 2 |