FFCP PHASE1:Hg19::chr1:44889718..44889726,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55182 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25552 | |||
|TSSclassifier=strong | |||
|UniProt=B4DLZ9 | |||
|association_with_transcript=6bp_to_ENST00000443020_5end | |||
|coexpression_cluster_id=C3618 | |||
|description=CAGE_peak_26_at_RNF220_5end | |||
|id=chr1:44889718..44889726,+ | |||
|ontology_enrichment_celltype=CL:0002623!4.09e-08!3;CL:0001024!9.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.06e-26;1!CL:0000557;4.06e-26;1!CL:0000763;4.74e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000049;7.07e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.57e-12!31;DOID:1240!1.23e-09!39;DOID:2531!5.24e-07!51;DOID:0060083!5.24e-07!51;DOID:9119!7.35e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.47e-28;31!DOID:9119;6.72e-26;1!DOID:1240;1.09e-18;39!DOID:2531;3.67e-16;51!DOID:0060083;3.67e-16;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.83e-29,31;DOID:9119,7.62e-26,1;DOID:1240,5.62e-23,39;DOID:2531,1.27e-17,51;DOID:0060083,1.27e-17,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,1.7235483311913,5.08016598537319,2.921597462471,3.93116049358842,0,0,5.01268954180134,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,2.66457574398256,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@RNF220 | |||
}} |
Revision as of 18:16, 10 January 2014
Short description: | p26@RNF220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_RNF220_5end |
Coexpression cluster: | C3618_acute_granulocyte_CD133_CD34_renal_Dendritic_chronic |
Association with transcript: | 6bp_to_ENST00000443020_5end |
EntrezGene: | RNF220 |
HGNC: | 25552 |
UniProt: | B4DLZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.83e-29 | 31 |
acute myeloid leukemia | 7.62e-26 | 1 |
leukemia | 5.62e-23 | 39 |
hematologic cancer | 1.27e-17 | 51 |
immune system cancer | 1.27e-17 | 51 |