FFCP PHASE1:Hg19::chr2:113990903..113990907,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113990903..113990907,- | |||
|id=chr2:113990903..113990907,- | |||
|ontology_enrichment_celltype=CL:0002149!7.88e-09!6;CL:0002255!7.88e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;9.50e-30;6!CL:0002255;9.50e-30;6!CL:0000159;5.14e-15;2!CL:0000313;1.26e-08;1!CL:0000319;4.25e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,9.26e-30,6;CL:0002255,9.26e-30,6;CL:0000159,4.80e-15,2;CL:0000313,1.31e-08,1;CL:0000319,3.83e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.43e-23;5!UBERON:0007297;1.68e-14;2!UBERON:0005795;1.08e-11;10!UBERON:0003918;3.86e-11;10!UBERON:0007687;3.86e-11;10!UBERON:0005754;4.25e-08;1 | |||
|ontology_enrichment_disease=DOID:3001!7.88e-09!6;DOID:120!6.97e-08!27;DOID:299!3.27e-07!25;DOID:193!3.98e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3001;9.50e-30;6!DOID:299;1.49e-21;25!DOID:120;7.48e-20;27!DOID:193;2.19e-18;29!DOID:4468;4.46e-15;2!DOID:2152;1.26e-08;1!DOID:3030;4.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.26e-30,6;DOID:299,1.44e-21,25;DOID:120,7.09e-20,27;DOID:193,2.08e-18,29;DOID:4468,4.47e-15,2;DOID:2152,1.31e-08,1;DOID:3030,3.83e-08,1;DOID:305,2.37e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002113!8.78e-09!27;UBERON:0003918!8.78e-09!27;UBERON:0005095!8.78e-09!27;UBERON:0007687!8.78e-09!27;UBERON:0004175!2.95e-07!25;UBERON:0002046!5.55e-07!5;UBERON:0004117!5.55e-07!5;UBERON:0007689!5.55e-07!5;UBERON:0007123!5.55e-07!5;UBERON:0003091!5.55e-07!5;UBERON:0000489!6.78e-07!32;UBERON:0006947!8.04e-07!3;UBERON:0004054!8.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;8.43e-23;5!UBERON:0006947;7.36e-21;3!UBERON:0004054;7.36e-21;3!UBERON:0004175;3.15e-20;21!UBERON:0005904;8.44e-16;4!UBERON:0000341;6.34e-15;2!UBERON:0000995;2.16e-10;17!UBERON:0003135;4.90e-10;11!UBERON:0003975;8.43e-10;18!UBERON:0003133;9.41e-10;44!UBERON:0004911;1.26e-08;1!UBERON:0001000;4.25e-08;1!UBERON:0000998;4.25e-08;1!UBERON:0001301;4.25e-08;1!UBERON:0006868;4.25e-08;1!UBERON:0005352;4.25e-08;1!UBERON:0003134;3.57e-07;33!UBERON:0005156;6.31e-07;59!UBERON:0000990;6.31e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,7.77e-23,5;UBERON:0004117,7.77e-23,5;UBERON:0007689,7.77e-23,5;UBERON:0007123,7.77e-23,5;UBERON:0003091,7.77e-23,5;UBERON:0006947,4.11e-21,3;UBERON:0004054,4.11e-21,3;UBERON:0004175,6.73e-17,25;UBERON:0005904,5.47e-16,4;UBERON:0000341,1.04e-14,2;UBERON:0003133,6.88e-13,48;UBERON:0009722,1.76e-10,11;UBERON:0007690,1.76e-10,11;UBERON:0005156,3.59e-10,59;UBERON:0000990,3.59e-10,59;UBERON:0003135,4.68e-10,11;UBERON:0002113,5.68e-09,26;UBERON:0003918,5.68e-09,26;UBERON:0011143,5.68e-09,26;UBERON:0005095,5.68e-09,26;UBERON:0007687,5.68e-09,26;UBERON:0004911,1.31e-08,1;UBERON:0000995,2.28e-08,21;UBERON:0001301,2.50e-08,1;UBERON:0000998,2.89e-08,1;UBERON:0006868,2.89e-08,1;UBERON:0005795,5.61e-08,22;UBERON:0003975,5.61e-08,22;UBERON:0001000,5.82e-08,1;UBERON:0005352,5.82e-08,1;UBERON:0000489,1.93e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.224723484445085,1.22433556948361,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,1.46139224653261,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,2.22617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06395354867265,1.46909527343233,0,0,0.995261931078505,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0.728341138602278,1.18375320854817,0,0,0,0,0,0,0,0,0,3.13070500632772,0,3.64475450503775,0,0.435296032902013,1.92199335066233,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26089131678717,1.10154635083496,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,1.5652351854352,0,0,0,0,0.859284456339908,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0.172214979660816,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,5.72767171360125,2.79185747097888,3.82215575590973,4.13865097651832,0,0.121917924982269,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.41157948686277,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,0,0,1.0661699095049,3.80903090341985,0,0,1.56984607612859,2.60953348940476,21.0201876516548,0,0,0.0673520530145875,0,0,0,0.640364075266293,0,0.359300808426348,0,0.366724332548599,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p@chr2:113990903..113990907,- | |||
}} |
Revision as of 05:05, 21 January 2014
Short description: | p@chr2:113990903..113990907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113990903..113990907, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.26e-30 | 6 |
stromal cell of endometrium | 9.26e-30 | 6 |
seromucus secreting cell | 4.80e-15 | 2 |
serous secreting cell | 1.31e-08 | 1 |
mucus secreting cell | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 7.77e-23 | 5 |
pharyngeal pouch | 7.77e-23 | 5 |
thyroid diverticulum | 7.77e-23 | 5 |
pharyngeal pouch 2 | 7.77e-23 | 5 |
thyroid primordium | 7.77e-23 | 5 |
male genital duct | 4.11e-21 | 3 |
internal male genitalia | 4.11e-21 | 3 |
internal genitalia | 6.73e-17 | 25 |
duct of male reproductive system | 5.47e-16 | 4 |
throat | 1.04e-14 | 2 |
reproductive organ | 6.88e-13 | 48 |
entire pharyngeal arch endoderm | 1.76e-10 | 11 |
early pharyngeal endoderm | 1.76e-10 | 11 |
reproductive structure | 3.59e-10 | 59 |
reproductive system | 3.59e-10 | 59 |
male reproductive organ | 4.68e-10 | 11 |
kidney | 5.68e-09 | 26 |
kidney mesenchyme | 5.68e-09 | 26 |
upper urinary tract | 5.68e-09 | 26 |
kidney rudiment | 5.68e-09 | 26 |
kidney field | 5.68e-09 | 26 |
epithelium of female gonad | 1.31e-08 | 1 |
uterus | 2.28e-08 | 21 |
epididymis | 2.50e-08 | 1 |
seminal vesicle | 2.89e-08 | 1 |
seminal fluid secreting gland | 2.89e-08 | 1 |
embryonic uterus | 5.61e-08 | 22 |
internal female genitalia | 5.61e-08 | 22 |
vas deferens | 5.82e-08 | 1 |
spermatic cord | 5.82e-08 | 1 |
cavitated compound organ | 1.93e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.26e-30 | 6 |
adenocarcinoma | 1.44e-21 | 25 |
female reproductive organ cancer | 7.09e-20 | 27 |
reproductive organ cancer | 2.08e-18 | 29 |
clear cell adenocarcinoma | 4.47e-15 | 2 |
ovary epithelial cancer | 1.31e-08 | 1 |
mucinous adenocarcinoma | 3.83e-08 | 1 |
carcinoma | 2.37e-07 | 106 |