FFCP PHASE1:Hg19::chr2:12857320..12857334,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28951 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30809 | |||
|TSSclassifier=not | |||
|UniProt=Q92519 | |||
|association_with_transcript=305bp_to_ENST00000155926_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_14_at_TRIB2_5end | |||
|id=chr2:12857320..12857334,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.76e-23;10!CL:0000147;3.92e-16;14!CL:0002567;5.43e-15;3!CL:0000710;5.29e-11;20!CL:0000047;1.41e-10;2!CL:0002575;1.41e-10;2!CL:0002549;3.32e-10;2!CL:0000097;4.43e-09;5!CL:0000075;6.72e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.20e-23,10;CL:0000541,2.20e-23,10;CL:0000147,1.99e-16,14;CL:0002567,2.55e-15,3;CL:0000710,3.35e-11,20;CL:0002575,8.36e-11,2;CL:0002549,8.83e-10,2;CL:0000333,2.21e-09,41;CL:0000097,5.79e-09,5;CL:0002028,5.79e-09,5;CL:0000133,6.73e-09,59;CL:0000075,4.84e-08,27;CL:0000221,6.41e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.44e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.46e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.32e-10;2!UBERON:0005358;3.32e-10;2!UBERON:0001886;3.32e-10;2!UBERON:0004086;3.32e-10;2!UBERON:0005282;3.32e-10;2!UBERON:0005281;3.32e-10;2!UBERON:0005284;7.28e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,8.83e-10,2;UBERON:0005358,8.83e-10,2;UBERON:0001886,8.83e-10,2;UBERON:0004086,8.83e-10,2;UBERON:0005282,8.83e-10,2;UBERON:0005281,8.83e-10,2;UBERON:0005284,1.67e-08,5;UBERON:0004145,5.22e-07,3 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0,0.730310090387373,0,0.369363174230364,1.22400414746552,0.626909442956176,0,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60158394814405,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,1.17842362989935,0.443067789167242,1.08321545506006,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0.68725489096526,0.253019692019503,0,0,0,0,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,1.2786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.472674085820339,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.379891534993739,0.794455084879313,0,0,0,1.06748995729705,0,0.933633106199299,0.404132016209064,0.326923806226917,1.05950199351452,1.15235184896,0,0,0.570471821544449,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,1.47798971368783,2.55340458638356,0.829312462163088,0.432359860250884,1.00993946741104,2.6669115602711,1.52795370223311,14.0660936652056,1.71072446022705,2.46785982487976,1.8020583470635,18.292891688357,0.448524337381443,0.43596006883328,0.36669142910475,0,3.57656445851882,0,0,0,0.514414748524284,0,0,0.857867961948885,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0.256686072559497,2.28685161800217,1.30139853857622,0,0.502548796003046,0,0,0,0,0.981531933753119,0,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,2.54541504701563,1.71571711905428,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0,0.160853921143607,0,0.462629081407967,0.887808626565635,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0,0,1.116475108079,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,1.55519793830904,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.337005664903385,0,0.468528891450678,0.729819156862664,0,1.21390189767046,0,0,0,0.505492637027904,0,0.103688191397247,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0,0.34945333648406,3.61170668190395,0,0,0,0,0,3.84167259326905,0,0,0.253243183823515,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.525774708558629,0,0.229160424011684,1.43574604915363,0.599037001496973,0.429226048136571,0.669514372325618,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0.83088067605837,0,0,0.303747783290123,0,0.157611414598396,0.524545881349981,0,0,0,0,0.662091970365432,1.77987976358325,0.542999601753713,0,0,0,0.164185041498678,0,0.679872549120754,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0,0.124192805882767,0,0.499921631848426,3.03298235083296,3.99651466962954,0,0,0.434763085832475,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0.899606224327209,0.465788870628778,0.414706207840855,0,0,0.150257608997218,0.761610424337591,0,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0.24577290875371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| |||
|short_description=p14@TRIB2 | |||
}} |
Revision as of 01:47, 21 January 2014
Short description: | p14@TRIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TRIB2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 305bp_to_ENST00000155926_5end |
EntrezGene: | TRIB2 |
HGNC: | 30809 |
UniProt: | Q92519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.20e-23 | 10 |
melanoblast | 2.20e-23 | 10 |
pigment cell | 1.99e-16 | 14 |
light melanocyte | 2.55e-15 | 3 |
neurecto-epithelial cell | 3.35e-11 | 20 |
central nervous system pericyte | 8.36e-11 | 2 |
fibroblast of choroid plexus | 8.83e-10 | 2 |
migratory neural crest cell | 2.21e-09 | 41 |
mast cell | 5.79e-09 | 5 |
basophil mast progenitor cell | 5.79e-09 | 5 |
neurectodermal cell | 6.73e-09 | 59 |
columnar/cuboidal epithelial cell | 4.84e-08 | 27 |
ectodermal cell | 6.41e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 8.83e-10 | 2 |
ventricle of nervous system | 8.83e-10 | 2 |
choroid plexus | 8.83e-10 | 2 |
brain ventricle | 8.83e-10 | 2 |
ventricular system of brain | 8.83e-10 | 2 |
ventricular system of central nervous system | 8.83e-10 | 2 |
brain vasculature | 1.67e-08 | 5 |
outflow tract | 5.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.46e-11 | 2 |