FFCP PHASE1:Mm9::chr10:18551620..18551631,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=50|UniProt=|association_with_transcript=-38bp_to_uc007emw.2,uc011xao.1,uc011xap.1,uc011xaq.1,uc011xar.1,uc011xas.1,uc011xat.1,uc011xau.1,uc011xav.1,uc011xaw.1_5end|description=CAGE_peak_1_at_uc007emw.2_5end,CAGE_peak_1_at_uc011xao.1_5end,CAGE_peak_1_at_uc011xap.1_5end,CAGE_peak_1_at_uc011xaq.1_5end,CAGE_peak_1_at_uc011xar.1_5end,CAGE_peak_1_at_uc011xas.1_5end,CAGE_peak_1_at_uc011xat.1_5end,CAGE_peak_1_at_uc011xau.1_5end,CAGE_peak_1_at_uc011xav.1_5end,CAGE_peak_1_at_uc011xaw.1_5end|id=chr10:18551620..18551631,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.39e-21!14;UBERON:0000117!3.39e-21!14;UBERON:0000171!3.39e-21!14;UBERON:0000170!3.39e-21!14;UBERON:0005597!3.39e-21!14;UBERON:0000118!3.39e-21!14;UBERON:0005153!6.03e-17!17;UBERON:0005178!6.03e-17!17;UBERON:0005181!6.03e-17!17;UBERON:0002224!6.03e-17!17;UBERON:0000915!6.03e-17!17;UBERON:0008947!6.03e-17!17;UBERON:0003258!6.03e-17!17;UBERON:0000065!4.57e-10!41;UBERON:0001004!9.75e-10!42;UBERON:0005157!1.25e-09!27;UBERON:0005911!5.76e-09!69;UBERON:0000466!9.64e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.89e-11,14;UBERON:0000117,2.89e-11,14;UBERON:0000171,2.89e-11,14;UBERON:0000170,2.89e-11,14;UBERON:0005597,2.89e-11,14;UBERON:0000118,2.89e-11,14;UBERON:0005153,2.41e-09,17;UBERON:0005178,2.41e-09,17;UBERON:0005181,2.41e-09,17;UBERON:0002224,2.41e-09,17;UBERON:0000915,2.41e-09,17;UBERON:0008947,2.41e-09,17;UBERON:0003258,2.41e-09,17;UBERON:0005157,5.42e-08,20;UBERON:0000310,2.36e-07,6;UBERON:0001443,2.36e-07,6;UBERON:0000473,5.81e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,6.65249373045932,9.92559198727954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,1.64283173801951,2.01007508930179,0.714130922658041,0.975668239288994,0.788175720530955,1.32878813789265,0.478364305972461,0.655453258862952,0.172684981865896,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,3.8653459332161,2.30424005006292,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.128050304809739,0,0.952587382566147,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc007emw.2,p1@uc011xao.1,p1@uc011xap.1,p1@uc011xaq.1,p1@uc011xar.1,p1@uc011xas.1,p1@uc011xat.1,p1@uc011xau.1,p1@uc011xav.1,p1@uc011xaw.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_uc007emw.2,uc011xao.1,uc011xap.1,uc011xaq.1,uc011xar.1,uc011xas.1,uc011xat.1,uc011xau.1,uc011xav.1,uc011xaw.1_5end | |||
|cluster_id=chr10:18551620..18551631,- | |||
|description=CAGE_peak_1_at_uc007emw.2_5end,CAGE_peak_1_at_uc011xao.1_5end,CAGE_peak_1_at_uc011xap.1_5end,CAGE_peak_1_at_uc011xaq.1_5end,CAGE_peak_1_at_uc011xar.1_5end,CAGE_peak_1_at_uc011xas.1_5end,CAGE_peak_1_at_uc011xat.1_5end,CAGE_peak_1_at_uc011xau.1_5end,CAGE_peak_1_at_uc011xav.1_5end,CAGE_peak_1_at_uc011xaw.1_5end | |||
|id=chr10:18551620..18551631,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.39e-21!14;UBERON:0000117!3.39e-21!14;UBERON:0000171!3.39e-21!14;UBERON:0000170!3.39e-21!14;UBERON:0005597!3.39e-21!14;UBERON:0000118!3.39e-21!14;UBERON:0005153!6.03e-17!17;UBERON:0005178!6.03e-17!17;UBERON:0005181!6.03e-17!17;UBERON:0002224!6.03e-17!17;UBERON:0000915!6.03e-17!17;UBERON:0008947!6.03e-17!17;UBERON:0003258!6.03e-17!17;UBERON:0000065!4.57e-10!41;UBERON:0001004!9.75e-10!42;UBERON:0005157!1.25e-09!27;UBERON:0005911!5.76e-09!69;UBERON:0000466!9.64e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.89e-11,14;UBERON:0000117,2.89e-11,14;UBERON:0000171,2.89e-11,14;UBERON:0000170,2.89e-11,14;UBERON:0005597,2.89e-11,14;UBERON:0000118,2.89e-11,14;UBERON:0005153,2.41e-09,17;UBERON:0005178,2.41e-09,17;UBERON:0005181,2.41e-09,17;UBERON:0002224,2.41e-09,17;UBERON:0000915,2.41e-09,17;UBERON:0008947,2.41e-09,17;UBERON:0003258,2.41e-09,17;UBERON:0005157,5.42e-08,20;UBERON:0000310,2.36e-07,6;UBERON:0001443,2.36e-07,6;UBERON:0000473,5.81e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,6.65249373045932,9.92559198727954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,1.64283173801951,2.01007508930179,0.714130922658041,0.975668239288994,0.788175720530955,1.32878813789265,0.478364305972461,0.655453258862952,0.172684981865896,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0,0,0,0,0,0,0,0,3.8653459332161,2.30424005006292,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.128050304809739,0,0.952587382566147,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc007emw.2,p1@uc011xao.1,p1@uc011xap.1,p1@uc011xaq.1,p1@uc011xar.1,p1@uc011xas.1,p1@uc011xat.1,p1@uc011xau.1,p1@uc011xav.1,p1@uc011xaw.1 | |||
}} |
Latest revision as of 04:35, 4 August 2015
Short description: | p1@uc007emw.2, p1@uc011xao.1, p1@uc011xap.1, p1@uc011xaq.1, p1@uc011xar.1, p1@uc011xas.1, p1@uc011xat.1, p1@uc011xau.1, p1@uc011xav.1, p1@uc011xaw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007emw.2_5end, CAGE_peak_1_at_uc011xao.1_5end, CAGE_peak_1_at_uc011xap.1_5end, CAGE_peak_1_at_uc011xaq.1_5end, CAGE_peak_1_at_uc011xar.1_5end, CAGE_peak_1_at_uc011xas.1_5end, CAGE_peak_1_at_uc011xat.1_5end, CAGE_peak_1_at_uc011xau.1_5end, CAGE_peak_1_at_uc011xav.1_5end, CAGE_peak_1_at_uc011xaw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -38bp_to_uc007emw.2, uc011xao.1, uc011xap.1, uc011xaq.1, uc011xar.1, uc011xas.1, uc011xat.1, uc011xau.1, uc011xav.1, uc011xaw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.89e-11 | 14 |
respiratory tube | 2.89e-11 | 14 |
respiration organ | 2.89e-11 | 14 |
pair of lungs | 2.89e-11 | 14 |
lung primordium | 2.89e-11 | 14 |
lung bud | 2.89e-11 | 14 |
epithelial bud | 2.41e-09 | 17 |
thoracic cavity element | 2.41e-09 | 17 |
thoracic segment organ | 2.41e-09 | 17 |
thoracic cavity | 2.41e-09 | 17 |
thoracic segment of trunk | 2.41e-09 | 17 |
respiratory primordium | 2.41e-09 | 17 |
endoderm of foregut | 2.41e-09 | 17 |
epithelial fold | 5.42e-08 | 20 |
breast | 2.36e-07 | 6 |
chest | 2.36e-07 | 6 |
testis | 5.81e-07 | 14 |