FFCP PHASE1:Hg19::chr2:238153616..238153621,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:238153616..238153621,- | |||
|id=chr2:238153616..238153621,- | |||
|ontology_enrichment_celltype=CL:0002195!8.62e-10!2;CL:0002571!8.62e-10!2;CL:0000048!5.48e-08!430;CL:0000723!9.32e-08!436;CL:0002540!1.80e-07!6;CL:0000034!1.85e-07!444;CL:0000057!9.09e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.36e-23;5!CL:0002540;5.35e-20;6!CL:0002195;2.21e-15;2!CL:0002561;2.21e-15;2!CL:0002571;2.21e-15;2!CL:0002092;2.00e-12;10!CL:0000346;7.42e-11;3!CL:1000428;7.42e-11;3!CL:0000048;2.38e-09;58!CL:0000134;1.27e-08;55!CL:0000723;1.59e-08;61!CL:0000569;2.35e-08;4!CL:0002552;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.14e-23,5;CL:0002540,5.35e-20,6;CL:0002561,1.78e-15,2;CL:0002195,2.74e-15,2;CL:0002571,2.74e-15,2;CL:0002092,2.00e-12,10;CL:0000346,7.42e-11,3;CL:1000428,7.42e-11,3;CL:0000569,2.26e-08,4;CL:0000011,2.26e-08,4;CL:0002552,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000011;2.35e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.36e-23;5!UBERON:0005933;2.21e-15;2!UBERON:0005942;2.21e-15;2!UBERON:0005932;2.21e-15;2!UBERON:0000412;7.42e-11;3!UBERON:0001992;7.42e-11;3!UBERON:0002371;1.60e-10;12!UBERON:0001003;1.50e-08;15!UBERON:0007376;1.50e-08;15!UBERON:0001474;2.52e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.14e-23,5;UBERON:0005086,1.14e-23,5;UBERON:0005933,1.78e-15,2;UBERON:0005942,1.78e-15,2;UBERON:0005932,1.78e-15,2;UBERON:0000412,7.42e-11,3;UBERON:0001992,7.42e-11,3;UBERON:0001003,1.42e-08,15;UBERON:0007376,1.42e-08,15;UBERON:0007383,1.42e-08,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0.492762936082855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,2.46223906857616,4.0250864280412,0.889811221596536,0,1.36107831386915,0,0.443565449968902,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:238153616..238153621,- | |||
}} |
Revision as of 09:24, 21 January 2014
Short description: | p@chr2:238153616..238153621, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238153616..238153621, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.14e-23 | 5 |
mesenchymal stem cell of the bone marrow | 5.35e-20 | 6 |
outer root sheath cell | 1.78e-15 | 2 |
hepatic stem cell | 2.74e-15 | 2 |
hepatic mesenchymal stem cell | 2.74e-15 | 2 |
bone marrow cell | 2.00e-12 | 10 |
hair follicle dermal papilla cell | 7.42e-11 | 3 |
stem cell of epidermis | 7.42e-11 | 3 |
cardiac mesenchymal cell | 2.26e-08 | 4 |
migratory trunk neural crest cell | 2.26e-08 | 4 |
fibroblast of gingiva | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.14e-23 | 5 |
hair follicle placode | 1.14e-23 | 5 |
hair root sheath | 1.78e-15 | 2 |
hair outer root sheath | 1.78e-15 | 2 |
bulb of hair follicle | 1.78e-15 | 2 |
dermal papilla | 7.42e-11 | 3 |
papillary layer of dermis | 7.42e-11 | 3 |
skin epidermis | 1.42e-08 | 15 |
outer epithelium | 1.42e-08 | 15 |
enveloping layer of ectoderm | 1.42e-08 | 15 |