FFCP PHASE1:Hg19::chr3:104628811..104628831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:104628811..104628831,- | |||
|id=chr3:104628811..104628831,- | |||
|ontology_enrichment_celltype=CL:0000222!4.33e-27!119;CL:0002139!1.08e-25!24;CL:0000055!1.57e-20!180;CL:0000071!4.17e-19!18;CL:0002546!4.17e-19!18;CL:0000115!1.63e-16!35;CL:0000680!3.99e-16!57;CL:0000056!3.99e-16!57;CL:0000355!3.99e-16!57;CL:1000413!1.85e-13!9;CL:0000187!1.85e-13!54;CL:0000183!9.92e-13!59;CL:0000213!7.37e-12!57;CL:0000215!7.37e-12!57;CL:0002078!1.37e-11!44;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0002371!4.95e-10!591;CL:0000057!7.34e-10!75;CL:0000048!2.30e-09!430;CL:0000723!2.49e-09!436;CL:0002544!2.80e-09!6;CL:0000144!6.69e-09!625;CL:0000034!1.12e-08!444;CL:0000548!1.12e-08!679;CL:0000004!1.12e-08!679;CL:0000255!1.12e-08!679;CL:0000192!1.28e-08!42;CL:0000514!1.28e-08!42;CL:0000220!1.51e-08!246;CL:0000012!1.82e-08!682;CL:0002321!2.43e-08!248;CL:0005020!3.75e-08!6;CL:0002138!3.75e-08!6;CL:0005022!3.75e-08!6;CL:0002620!1.03e-07!23;CL:0000188!1.54e-07!9;CL:0002551!4.87e-07!6;CL:0000359!8.21e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.27e-30;24!CL:0000071;5.75e-30;18!CL:1000413;2.71e-25;9!CL:0000115;1.28e-20;36!CL:0002544;5.83e-13;6!CL:0002078;2.39e-11;45!CL:0002545;1.48e-10;2!CL:0000213;2.30e-09;58!CL:0000215;2.30e-09;58!CL:0002543;1.30e-07;6!CL:0002573;1.39e-07;2!CL:0000515;2.10e-07;3!CL:0002618;2.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.66e-31,24;CL:0000071,2.62e-30,18;CL:0002546,2.62e-30,18;CL:1000413,9.12e-26,9;CL:0000115,9.31e-23,36;CL:0002078,1.38e-17,45;CL:0000222,6.76e-14,121;CL:0002544,3.56e-13,6;CL:0000213,5.86e-13,58;CL:0000215,5.86e-13,58;CL:0002545,1.29e-10,2;CL:0002321,1.19e-07,250;CL:0002543,1.31e-07,6;CL:0002573,1.63e-07,2;CL:0002618,2.89e-07,3;CL:0000076,4.29e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;5.75e-30;18 | |||
|ontology_enrichment_disease=DOID:2394!2.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.22e-21!69;UBERON:0004290!9.33e-20!70;UBERON:0001986!4.17e-19!18;UBERON:0004638!4.17e-19!18;UBERON:0004852!4.17e-19!18;UBERON:0000914!7.74e-19!83;UBERON:0002329!7.74e-19!83;UBERON:0003077!7.74e-19!83;UBERON:0003059!7.74e-19!83;UBERON:0007282!7.74e-19!83;UBERON:0009618!7.74e-19!83;UBERON:0007285!7.74e-19!83;UBERON:0002049!4.55e-18!79;UBERON:0007798!4.55e-18!79;UBERON:0001981!1.10e-17!60;UBERON:0007500!1.10e-17!60;UBERON:0004537!1.10e-17!60;UBERON:0006965!1.10e-17!60;UBERON:0000490!2.85e-16!138;UBERON:0001134!2.35e-15!61;UBERON:0002036!2.35e-15!61;UBERON:0003082!2.35e-15!61;UBERON:0004872!3.50e-15!84;UBERON:0000486!5.07e-15!82;UBERON:0000487!1.27e-14!22;UBERON:0002385!1.54e-14!63;UBERON:0001015!1.54e-14!63;UBERON:0000383!1.54e-14!63;UBERON:0001637!2.29e-14!42;UBERON:0003509!2.29e-14!42;UBERON:0004572!2.29e-14!42;UBERON:0004535!2.48e-14!110;UBERON:0001009!1.40e-13!113;UBERON:0003915!1.85e-13!9;UBERON:0004700!1.85e-13!9;UBERON:0001917!1.85e-13!9;UBERON:0006914!3.17e-12!25;UBERON:0003914!2.75e-09!118;UBERON:0004573!3.25e-09!33;UBERON:0004571!3.25e-09!33;UBERON:0005256!6.77e-09!143;UBERON:0000119!1.34e-07!312;UBERON:0000947!4.62e-07!21;UBERON:0010191!4.62e-07!21;UBERON:0000483!4.93e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.75e-30;18!UBERON:0001986;5.75e-30;18!UBERON:0004852;5.75e-30;18!UBERON:0003915;2.71e-25;9!UBERON:0004700;2.71e-25;9!UBERON:0001917;2.71e-25;9!UBERON:0000487;4.12e-24;22!UBERON:0006914;5.98e-21;25!UBERON:0000490;2.33e-13;33!UBERON:0001637;2.96e-12;42!UBERON:0003509;2.96e-12;42!UBERON:0004572;2.96e-12;42!UBERON:0000055;5.60e-11;65!UBERON:0002119;6.76e-11;4!UBERON:0005800;1.48e-10;2!UBERON:0001515;1.48e-10;2!UBERON:0007500;4.30e-10;56!UBERON:0001981;4.30e-10;56!UBERON:0004537;4.30e-10;56!UBERON:0002049;3.26e-09;75!UBERON:0007798;3.26e-09;75!UBERON:0000992;6.49e-09;13!UBERON:0010260;1.15e-08;9!UBERON:0003914;2.59e-08;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.62e-30,18;UBERON:0001986,2.62e-30,18;UBERON:0004852,2.62e-30,18;UBERON:0003915,9.12e-26,9;UBERON:0004700,9.12e-26,9;UBERON:0001917,9.12e-26,9;UBERON:0000487,2.18e-24,22;UBERON:0006914,3.44e-21,25;UBERON:0000055,2.29e-18,68;UBERON:0007500,4.87e-17,59;UBERON:0001981,4.87e-17,59;UBERON:0004537,4.87e-17,59;UBERON:0006965,4.87e-17,59;UBERON:0002049,1.75e-15,78;UBERON:0007798,1.75e-15,78;UBERON:0004872,2.26e-14,83;UBERON:0001637,6.89e-14,42;UBERON:0003509,6.89e-14,42;UBERON:0004572,6.89e-14,42;UBERON:0004535,1.14e-12,109;UBERON:0001009,3.28e-12,112;UBERON:0002119,5.15e-11,4;UBERON:0005800,1.29e-10,2;UBERON:0001515,1.29e-10,2;UBERON:0003914,3.12e-10,117;UBERON:0000490,2.38e-09,148;UBERON:0000992,5.78e-09,13;UBERON:0010260,1.25e-08,9;UBERON:0000926,1.41e-07,315;UBERON:0004120,1.41e-07,315;UBERON:0006603,1.41e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78267370313387,0.860234595106124,1.73570250803797,0.56530794192401,2.93649605346934,1.92582629358047,2.08994966536811,1.03366703667732,1.42306505074684,0.33472061276467,0.805658634218294,2.28081631715554,0,1.47065232138347,2.43042584364528,2.67899184852239,0.673588117878509,1.35133776579987,0,0.949265659568129,1.46561395144326,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0.653847612453835,0,0,0,0.936480230490962,1.1409436430889,0.149448680551801,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0.61417158655884,0.103325781175765,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.866198686566443,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.7333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,1.0656887160644,0,0,0,1.95441710576241,0,0,0,0,0,0,0,0,0.479249710983165,0,0,3.04040744001916,1.84928690295345,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.925258162815933,0,0.410635780069046,0.519254429183621,0.464841513839837,0,0,0,0.229628896329213,0.546273504020151,0,0,0,0,0,0.105551628892876,0,1.36074964221213,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.770243085573222,0.307007349452259,0.689182862422653,0.322260734604821,0.290033387828457,0.596586391912706,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0,1.06461206063404,0,1.66791797193528,0.429374660225974,0,0,0.38126038784765,0.511795582622668,0,0,0,0.899362287916574,0.54907405947211,0.824686816419805,1.61745985258653,0,0.842516912477962,0.975267478179181,0.974853958525138,0,0,0,0,0,0,0.438450885253763,0,0,2.23201414658974,0.30982349809975,0,0,0.0982490410131212,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15415370381156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,2.78271762557265,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,9.53830136174351,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,2.74560874950457,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0.447764408660622,0.467426619694449,0,0.378806010550178,0,0,1.37304041038154,0,0,1.62640664988597,1.59296767163702,1.34940933649081,0.621051827505038,1.65882483136342,1.06336685823198,0,0,0,0.813741466409323,2.00033525122815,0.537052785212442,2.78420255927096,0,0.400027764663154,0,0,7.57109389371906,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0.530067437837643,0,0.337884881306145,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48497201534187,2.04512171421978,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:104628811..104628831,- | |||
}} |
Revision as of 20:18, 21 January 2014
Short description: | p@chr3:104628811..104628831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:104628811..104628831, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.66e-31 | 24 |
blood vessel endothelial cell | 2.62e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.62e-30 | 18 |
endothelial cell of artery | 9.12e-26 | 9 |
endothelial cell | 9.31e-23 | 36 |
meso-epithelial cell | 1.38e-17 | 45 |
mesodermal cell | 6.76e-14 | 121 |
aortic endothelial cell | 3.56e-13 | 6 |
lining cell | 5.86e-13 | 58 |
barrier cell | 5.86e-13 | 58 |
thoracic aorta endothelial cell | 1.29e-10 | 2 |
embryonic cell | 1.19e-07 | 250 |
vein endothelial cell | 1.31e-07 | 6 |
Schwann cell | 1.63e-07 | 2 |
endothelial cell of umbilical vein | 2.89e-07 | 3 |
squamous epithelial cell | 4.29e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.62e-30 | 18 |
endothelium | 2.62e-30 | 18 |
cardiovascular system endothelium | 2.62e-30 | 18 |
endothelial tube | 9.12e-26 | 9 |
arterial system endothelium | 9.12e-26 | 9 |
endothelium of artery | 9.12e-26 | 9 |
simple squamous epithelium | 2.18e-24 | 22 |
squamous epithelium | 3.44e-21 | 25 |
vessel | 2.29e-18 | 68 |
epithelial tube open at both ends | 4.87e-17 | 59 |
blood vessel | 4.87e-17 | 59 |
blood vasculature | 4.87e-17 | 59 |
vascular cord | 4.87e-17 | 59 |
vasculature | 1.75e-15 | 78 |
vascular system | 1.75e-15 | 78 |
splanchnic layer of lateral plate mesoderm | 2.26e-14 | 83 |
artery | 6.89e-14 | 42 |
arterial blood vessel | 6.89e-14 | 42 |
arterial system | 6.89e-14 | 42 |
cardiovascular system | 1.14e-12 | 109 |
circulatory system | 3.28e-12 | 112 |
left ovary | 5.15e-11 | 4 |
segment of aorta | 1.29e-10 | 2 |
thoracic aorta | 1.29e-10 | 2 |
epithelial tube | 3.12e-10 | 117 |
unilaminar epithelium | 2.38e-09 | 148 |
female gonad | 5.78e-09 | 13 |
umbilical blood vessel | 1.25e-08 | 9 |
mesoderm | 1.41e-07 | 315 |
mesoderm-derived structure | 1.41e-07 | 315 |
presumptive mesoderm | 1.41e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-11 | 14 |