FFCP PHASE1:Hg19::chr3:110790481..110790492,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17664 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQS3 | |||
|association_with_transcript=-97bp_to_ENST00000485303_5end | |||
|description=CAGE_peak_4_at_PVRL3_5end | |||
|id=chr3:110790481..110790492,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.92e-12!180;CL:0002620!2.99e-10!23;CL:0000057!3.62e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.28e-11;23!CL:0002322;9.74e-10;5!CL:0000064;8.35e-08;3!CL:0000067;8.35e-08;3!CL:0005012;8.35e-08;3!CL:0002304;8.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.22e-11,23;CL:0002322,7.64e-10,5;CL:0000064,8.61e-08,3;CL:0000067,8.61e-08,3;CL:0005012,8.61e-08,3;CL:0002304,8.61e-08,3;CL:0000057,1.71e-07,76;CL:0002605,7.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.04e-11!365;UBERON:0000481!3.40e-10!347;UBERON:0000468!2.12e-08!659;UBERON:0000033!6.20e-08!123;UBERON:0000153!8.56e-08!129;UBERON:0007811!8.56e-08!129;UBERON:0003056!9.09e-07!61;UBERON:0001893!9.56e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.97e-12;11!UBERON:0006876;9.56e-11;11!UBERON:0002104;5.72e-10;21!UBERON:0001456;5.72e-10;21!UBERON:0000488;1.17e-09;4!UBERON:0000019;1.94e-09;19!UBERON:0000047;1.94e-09;19!UBERON:0004088;1.94e-09;19!UBERON:0010230;1.94e-09;19!UBERON:0002203;3.90e-09;6!UBERON:0001768;3.90e-09;6!UBERON:0002200;3.90e-09;6!UBERON:0001801;6.58e-09;14!UBERON:0000970;7.65e-09;20!UBERON:0001032;2.23e-08;24!UBERON:0004456;2.23e-08;24!UBERON:0001778;8.35e-08;3!UBERON:0001775;8.35e-08;3!UBERON:0000020;2.23e-07;23!UBERON:0001444;5.39e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.94e-12,11;UBERON:0001456,5.62e-11,22;UBERON:0006876,8.51e-11,11;UBERON:0010314,2.18e-10,132;UBERON:0000019,2.41e-10,20;UBERON:0000047,2.41e-10,20;UBERON:0010312,2.41e-10,20;UBERON:0004088,2.41e-10,20;UBERON:0010230,2.41e-10,20;UBERON:0003072,2.41e-10,20;UBERON:0004128,2.41e-10,20;UBERON:0003071,2.41e-10,20;UBERON:0001444,7.10e-10,49;UBERON:0000970,1.01e-09,21;UBERON:0002104,1.01e-09,21;UBERON:0000488,1.07e-09,4;UBERON:0002203,6.01e-09,6;UBERON:0001768,6.01e-09,6;UBERON:0002200,6.01e-09,6;UBERON:0001801,8.36e-09,14;UBERON:0005085,3.08e-08,31;UBERON:0000020,3.61e-08,24;UBERON:0001032,3.61e-08,24;UBERON:0004456,3.61e-08,24;UBERON:0000033,5.07e-08,56;UBERON:0001778,8.61e-08,3;UBERON:0001775,8.61e-08,3;UBERON:0003056,1.93e-07,61;UBERON:0002097,3.37e-07,41;UBERON:0004121,4.91e-07,171;UBERON:0000924,4.91e-07,171;UBERON:0006601,4.91e-07,171;UBERON:0002199,6.11e-07,46;UBERON:0002416,6.11e-07,46;UBERON:0000153,8.66e-07,62;UBERON:0007811,8.66e-07,62 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0.975865597581014,0.738726348460727,1.22400414746552,0.313454721478088,1.43117993565528,1.91624195102038,3.64073654824928,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,1.40648818027883,0.722878304769133,0,0.289693037921647,0,0,11.2496432425241,7.09534071880205,10.452339497482,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0.626984899610432,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0.81014194788176,0.714397826272638,0.44905874525234,0.563057402416611,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0.860509862246441,0,0.560677600142307,0,0,0.622422070799533,1.34710672069688,1.9615428373615,0.151357427644931,0,0,1.87296046098192,0,1.64393548606981,0.587172493218824,0.971237666208789,0.842704840213491,0.61246251376468,1.47401180774122,0.516628905878827,3.56400857184616,1.23633464639278,0,0,1.0100166837244,0.875829639103749,1.93944880838928,3.07284334616587,0.30648779579902,1.95309476578576,0.680593098960126,2.33206526395521,1.2813443329114,0.635795703478686,4.50136644126603,0.721367704669072,3.09168648054755,1.30281799432113,1.18143432568886,1.16924406193438,2.52433774244115,0.552299391853796,0.323292113637624,3.55009592516614,2.31729825923573,0.508681776931463,0.193260853163297,0,0,1.70763188581434,2.25300606146525,1.62671520017326,1.0366105501537,2.77552935963191,1.82488679537915,0,2.57296375277154,1.38134921352481,0,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.71181185733329,0.269662616320329,0,0.38474715694639,2.21446636387394,0,0,0,0,0,0.590789906681404,0.441463099414651,0.737930631258681,2.74508496477641,0,0,0,0,0,0,8.6598805215164,6.26024186865415,2.58299127318808,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0.380987365753014,0,0,0,0.719792448923265,0,0,0.560655421726804,0,1.3200891447771,0.129271715757778,0,0,1.06375246633948,0,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0,0.199945982364114,0,0,0,1.19812427745791,1.14861935834114,0,0.289562613335158,0.205476322550383,1.07436577943937,0.560425719967636,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.613457458595699,0.500170521059677,0.813795071099207,1.24782516918484,0.892144943985809,0.946214490203608,0,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.695068915744663,0.195801157462741,1.02943027143257,0,0,0.106727557803444,0.303127571446259,0,1.20956117331872,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.616838775210622,0,0.328508624055237,0,0.116210378459959,0.725156697549733,0,0.0920809889358963,0.459257792658427,0.364182336013434,0.524497659837696,0,0.385076685522074,0,0,0.105551628892876,0,0,1.29549549661284,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0.671624264166535,0,0,2.05160100093111,0.656029291399411,0,0.515205058238611,0.366277859273374,0,0,0,0,0,1.84858340537573,0.921022048356777,1.37836572484531,0.214840489736547,1.16013355131383,0.93749290157711,0.267096106940212,0,0.384380134730212,0.127612712494584,0.10115778085555,0,2.20368642781448,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,1.48863347743867,1.2655176988749,1.90630193923825,0.767693373934002,0,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0.487426979262569,0,0.682499557039929,0.848432591722276,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0.563391205064483,1.43411352204052,1.67023369722306,0,0.709522128141196,0.422215270595328,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,1.88287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0.890894042497916,0,1.9882952955326,0.703347082052564,0.222617410045812,1.48323486804084,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0.868124974666461,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,1.61394733071642,0.359030577639089,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.989471500037586,0.216388639742091,0.9952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| |||
|short_description=p4@PVRL3 | |||
}} |
Revision as of 20:26, 21 January 2014
Short description: | p4@PVRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PVRL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000485303_5end |
EntrezGene: | PVRL3 |
HGNC: | 17664 |
UniProt: | Q9NQS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.22e-11 | 23 |
embryonic stem cell | 7.64e-10 | 5 |
ciliated cell | 8.61e-08 | 3 |
ciliated epithelial cell | 8.61e-08 | 3 |
multi-ciliated epithelial cell | 8.61e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.61e-08 | 3 |
fibroblast | 1.71e-07 | 76 |
astrocyte of the cerebral cortex | 7.12e-07 | 3 |