FFCP PHASE1:Hg19::chr3:112127710..112127713,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1917 | |||
|description=CAGE_peak_at_chr3:112127710..112127713,- | |||
|id=chr3:112127710..112127713,- | |||
|ontology_enrichment_celltype=CL:1000507!5.58e-23!12;CL:1000494!5.58e-23!12;CL:1000449!8.90e-17!16;CL:1000497!1.04e-14!18;CL:0002518!1.04e-14!18;CL:0002681!1.13e-12!13;CL:0002584!1.13e-12!13;CL:0000239!1.39e-11!3;CL:1000615!1.39e-11!3;CL:0002306!1.39e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.34e-30;3!CL:1000615;3.34e-30;3!CL:0002306;3.34e-30;3!CL:0000313;1.87e-23;1!CL:1000507;2.11e-20;10!CL:1000494;2.11e-20;10!CL:1000449;7.51e-14;15!CL:0000159;1.96e-12;2!CL:1000497;2.65e-12;17!CL:0002518;2.65e-12;17!CL:0002681;2.60e-08;12!CL:0002584;2.60e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.10e-30,3;CL:1000615,3.10e-30,3;CL:0002306,3.10e-30,3;CL:0000313,2.10e-23,1;CL:1000507,1.91e-20,10;CL:1000494,1.91e-20,10;CL:1000449,7.03e-14,15;CL:0000159,2.07e-12,2;CL:1000497,2.50e-12,17;CL:0002518,2.50e-12,17;CL:0002681,2.55e-08,12;CL:0002584,2.55e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.65e-12;2!UBERON:0003918;1.01e-09;10!UBERON:0007687;1.01e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.87e-23;1!DOID:4468;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.10e-23,1;DOID:4468,1.48e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!5.58e-23!12;UBERON:0001231!5.58e-23!12;UBERON:0004810!5.58e-23!12;UBERON:0006554!8.70e-22!44;UBERON:0001008!3.37e-21!45;UBERON:0002113!9.27e-20!27;UBERON:0003918!9.27e-20!27;UBERON:0005095!9.27e-20!27;UBERON:0007687!9.27e-20!27;UBERON:0006555!1.53e-19!17;UBERON:0005103!1.53e-19!17;UBERON:0000083!1.53e-19!17;UBERON:0009201!1.53e-19!17;UBERON:0004819!1.53e-19!17;UBERON:0006553!1.53e-19!17;UBERON:0003074!1.53e-19!17;UBERON:0003060!1.53e-19!17;UBERON:0000489!1.15e-18!32;UBERON:0000080!2.47e-18!18;UBERON:0002120!2.47e-18!18;UBERON:0004875!2.47e-18!18;UBERON:0005721!2.47e-18!18;UBERON:0005754!2.47e-18!18;UBERON:0007297!2.47e-18!18;UBERON:0000058!2.40e-17!26;UBERON:0004211!8.90e-17!16;UBERON:0001285!8.90e-17!16;UBERON:0007684!8.90e-17!16;UBERON:0003220!8.90e-17!16;UBERON:0004208!8.90e-17!16;UBERON:0004876!2.78e-16!20;UBERON:0003887!2.11e-15!21;UBERON:0003064!2.14e-13!37;UBERON:0001225!1.13e-12!13;UBERON:0008987!1.13e-12!13;UBERON:0000353!4.72e-12!17;UBERON:0006853!1.39e-11!3;UBERON:0007685!1.39e-11!3;UBERON:0004134!1.39e-11!3;UBERON:0003886!1.93e-10!63;UBERON:0001851!4.32e-10!16;UBERON:0005172!1.75e-09!55;UBERON:0005173!1.75e-09!55;UBERON:0002553!5.05e-09!70;UBERON:0002417!3.07e-08!61;UBERON:0000916!3.07e-08!61;UBERON:0003103!5.44e-08!69;UBERON:0003135!6.35e-08!11;UBERON:0000464!2.38e-07!104;UBERON:0003101!5.13e-07!22;UBERON:0000079!5.13e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.67e-30;3!UBERON:0004054;2.67e-30;3!UBERON:0006853;3.34e-30;3!UBERON:0007685;3.34e-30;3!UBERON:0004134;3.34e-30;3!UBERON:0001301;1.34e-23;1!UBERON:0004911;1.87e-23;1!UBERON:0001000;4.10e-23;1!UBERON:0005352;4.10e-23;1!UBERON:0005904;5.14e-23;4!UBERON:0002113;5.89e-23;24!UBERON:0011143;5.89e-23;24!UBERON:0004211;2.11e-20;10!UBERON:0009773;2.11e-20;10!UBERON:0001231;2.11e-20;10!UBERON:0004810;2.11e-20;10!UBERON:0000489;4.72e-19;29!UBERON:0006554;1.99e-18;30!UBERON:0001008;1.99e-18;30!UBERON:0006555;7.51e-14;15!UBERON:0004819;7.51e-14;15!UBERON:0001285;7.51e-14;15!UBERON:0007684;7.51e-14;15!UBERON:0004909;1.96e-12;2!UBERON:0000058;8.09e-10;10!UBERON:0003135;5.20e-09;11!UBERON:0005172;1.26e-08;52!UBERON:0005173;1.26e-08;52!UBERON:0001225;2.60e-08;12!UBERON:0008987;2.60e-08;12!UBERON:0001851;7.98e-07;15!UBERON:0000353;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.25e-30,26;UBERON:0003918,2.25e-30,26;UBERON:0011143,2.25e-30,26;UBERON:0005095,2.25e-30,26;UBERON:0007687,2.25e-30,26;UBERON:0006853,3.10e-30,3;UBERON:0007685,3.10e-30,3;UBERON:0004134,3.10e-30,3;UBERON:0006947,3.59e-30,3;UBERON:0004054,3.59e-30,3;UBERON:0000489,1.66e-25,31;UBERON:0001301,1.34e-23,1;UBERON:0004911,2.10e-23,1;UBERON:0001000,6.40e-23,1;UBERON:0005352,6.40e-23,1;UBERON:0005904,6.42e-23,4;UBERON:0006555,1.92e-22,16;UBERON:0004819,1.92e-22,16;UBERON:0004810,1.91e-20,10;UBERON:0006554,7.22e-17,47;UBERON:0001008,1.61e-16,48;UBERON:0005172,1.09e-14,54;UBERON:0005173,1.09e-14,54;UBERON:0004211,7.03e-14,15;UBERON:0009773,7.03e-14,15;UBERON:0001231,7.03e-14,15;UBERON:0001285,7.03e-14,15;UBERON:0007684,7.03e-14,15;UBERON:0004208,7.03e-14,15;UBERON:0002417,3.17e-13,60;UBERON:0000916,3.17e-13,60;UBERON:0004909,2.07e-12,2;UBERON:0003103,1.14e-11,68;UBERON:0003135,5.64e-09,11;UBERON:0001225,2.55e-08,12;UBERON:0008987,2.55e-08,12;UBERON:0005177,7.67e-08,101;UBERON:0009569,4.63e-07,112;UBERON:0001851,7.86e-07,15;UBERON:0000353,7.86e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.802025881213139,0,0,0,0,0.902399225814824,0.693138033939733,1.56869953835371,0,0.844413031143006,0,0,0,0,0.270946437543853,0.501689773854853,1.52925763827023,2.49322802678617,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,7.01901075084335,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,1.73372556058236,1.41627387964495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | |||
|short_description=p@chr3:112127710..112127713,- | |||
}} |
Revision as of 20:30, 21 January 2014
Short description: | p@chr3:112127710..112127713, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112127710..112127713, - |
Coexpression cluster: | C1917_clear_epididymis_serous_uterus_kidney_B_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.10e-30 | 3 |
kidney cortex tubule cell | 3.10e-30 | 3 |
epithelial cell of proximal tubule | 3.10e-30 | 3 |
serous secreting cell | 2.10e-23 | 1 |
kidney tubule cell | 1.91e-20 | 10 |
nephron tubule epithelial cell | 1.91e-20 | 10 |
epithelial cell of nephron | 7.03e-14 | 15 |
seromucus secreting cell | 2.07e-12 | 2 |
kidney cell | 2.50e-12 | 17 |
kidney epithelial cell | 2.50e-12 | 17 |
kidney cortical cell | 2.55e-08 | 12 |
renal cortical epithelial cell | 2.55e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.10e-23 | 1 |
clear cell adenocarcinoma | 1.48e-12 | 2 |