FFCP PHASE1:Mm9::chr11:78798336..78798425,-: Difference between revisions
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{{FFCP|EntrezGene=16859|HGNC=|MCL_coexpression_id=166|UniProt=G3X9T7,O08573,Q3UKE5|association_with_transcript=0bp_to_ENSMUST00000108269,NM_001159301,NM_010708,uc007kkd.2,uc007kke.2_5end|description=CAGE_peak_1_at_Lgals9_5end|id=chr11:78798336..78798425,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.45e-20!130;UBERON:0000925!1.45e-20!130;UBERON:0006595!1.45e-20!130;UBERON:0001007!2.14e-19!128;UBERON:0001555!2.14e-19!128;UBERON:0007026!2.14e-19!128;UBERON:0004921!2.05e-18!126;UBERON:0004185!2.05e-18!126;UBERON:0002405!1.98e-15!70;UBERON:0000490!1.15e-13!66;UBERON:0003929!1.85e-13!55;UBERON:0005911!4.85e-12!69;UBERON:0005057!2.24e-11!51;UBERON:0005409!1.46e-10!59;UBERON:0009854!5.38e-10!23;UBERON:0009856!5.38e-10!23;UBERON:0002107!1.32e-09!22;UBERON:0007499!1.32e-09!22;UBERON:0006925!1.32e-09!22;UBERON:0009497!1.32e-09!22;UBERON:0000015!1.32e-09!22;UBERON:0002423!1.32e-09!22;UBERON:0006235!1.32e-09!22;UBERON:0008835!1.32e-09!22;UBERON:0003894!1.32e-09!22;UBERON:0004161!1.32e-09!22;UBERON:0008836!1.32e-09!22;UBERON:0004923!1.98e-09!24;UBERON:0000160!5.89e-09!43;UBERON:0000077!8.34e-09!97;UBERON:0001041!1.75e-08!92;UBERON:0002365!3.27e-08!25;UBERON:0002330!3.27e-08!25;UBERON:0000344!1.33e-07!15;UBERON:0002193!2.96e-07!48;UBERON:0003104!3.51e-07!131;UBERON:0009142!3.51e-07!131;UBERON:0001242!9.76e-07!13;UBERON:0000060!9.76e-07!13;UBERON:0001262!9.76e-07!13;UBERON:0004786!9.76e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.05e-21,118;UBERON:0000925,2.05e-21,118;UBERON:0006595,2.05e-21,118;UBERON:0001007,3.18e-20,116;UBERON:0001555,3.18e-20,116;UBERON:0007026,3.18e-20,116;UBERON:0004921,3.17e-19,114;UBERON:0000490,1.14e-13,66;UBERON:0003929,1.85e-13,55;UBERON:0005409,2.80e-12,47;UBERON:0005911,4.85e-12,69;UBERON:0000160,2.95e-11,31;UBERON:0009854,5.38e-10,23;UBERON:0009856,5.38e-10,23;UBERON:0002107,1.32e-09,22;UBERON:0007499,1.32e-09,22;UBERON:0006925,1.32e-09,22;UBERON:0009497,1.32e-09,22;UBERON:0000015,1.32e-09,22;UBERON:0002423,1.32e-09,22;UBERON:0006235,1.32e-09,22;UBERON:0008835,1.32e-09,22;UBERON:0003894,1.32e-09,22;UBERON:0004161,1.32e-09,22;UBERON:0008836,1.32e-09,22;UBERON:0004923,1.98e-09,24;UBERON:0001041,4.22e-09,80;UBERON:0002365,3.27e-08,25;UBERON:0002330,3.27e-08,25;UBERON:0005256,7.80e-08,45;UBERON:0000344,1.33e-07,15;UBERON:0002193,2.96e-07,48;UBERON:0002405,2.96e-07,48;UBERON:0001242,9.76e-07,13;UBERON:0001262,9.76e-07,13;UBERON:0004786,9.76e-07,13|phase1_expression=12.3314612270691,393.644259817199,293.92950864564,408.931613686834,473.346464799298,433.800038620323,503.902465764549,223.512472877369,48.2905316980217,56.6436153699224,13.0125655851384,21.5384829287408,226.498565698985,259.114072769908,232.510613747333,295.411415121756,221.761115366622,197.163853348899,148.906274895832,130.287623101995,80.450952482912,194.709555304936,156.197473905083,676.127978724937,532.458941356902,374.973472567108,552.667641072093,597.286257005284,821.851289148817,777.260920179626,639.027331708588,48.262331182932,80.5734871735787,47.5445043046316,710.574984588136,860.929228311632,714.796916274554,572.132739217353,446.14248172309,558.076311076069,458.23232917616,396.849426760857,507.843829270587,288.555506800023,271.994306461958,180.242910622771,548.456332387975,8.93903141159831,41.0813161713462,34.997381833371,127.667616522331,21.5628846547457,126.340302361475,112.431132011758,135.109707255271,205.293029956686,136.389917410848,191.830018327209,2.63011399117477,3.70293685490423,1.90149421051854,151.802350366971,280.127860775009,371.658583237218,499.377513096322,399.289824599708,149.800055259202,110.270653627286,3.7328260431052,2.8351247049655,3.57552434297349,22.5664277679005,24.7372765865807,1.34739879136449,2.87536413054709,0.919218786610021,4.40463523997555,12.3856717942632,10.4452442614246,2.90149833006426,3.47653045689157,1.56274011167028,12.5632349550621,17.4456409109821,16.0438160165651,10.606629077052,22.067610523861,6.71038004971082,31.0477392666055,42.3956452199067,218.557824481065,1196.84961288111,687.451018378536,1510.62923339425,1289.15641221618,900.534043065644,584.951009848746,308.478883866285,228.351898045922,210.237046833652,0.845060518660083,195.056245669763,66.2493623237279,49.7746692207332,21.8655951421326,21.2822286999083,21.2320266906209,690.469920661156,425.952818599597,87.7293041873114,41.2895077703403,69.4181290551682,79.5623465533402,104.149344621862,117.471118428569,95.3809428192237,503.783344242654,221.237016087465,242.383291234266,96.7365762685507,179.76499602676,190.071099229007,510.713425737655,14.3462590535658,9.42510180660548,1230.53663493978,299.417996140295,314.349031040546,321.233534040708,16.926342252745,19.2150253183823,7.79056983099759,17.5562563394199,14.8314965251592,18.4931359658008,15.5751612545047,126.993686721344,167.825003353015,42.710146175291,47.7703012862296,8.19758790665033,9.88579049063934,11.5239763075424,31.4973069276644,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16859 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X9T7,uniprot:O08573,uniprot:Q3UKE5 | |||
|association_with_transcript=0bp_to_ENSMUST00000108269,NM_001159301,NM_010708,uc007kkd.2,uc007kke.2_5end | |||
|cluster_id=chr11:78798336..78798425,- | |||
|description=CAGE_peak_1_at_Lgals9_5end | |||
|id=chr11:78798336..78798425,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-20!130;UBERON:0000925!1.45e-20!130;UBERON:0006595!1.45e-20!130;UBERON:0001007!2.14e-19!128;UBERON:0001555!2.14e-19!128;UBERON:0007026!2.14e-19!128;UBERON:0004921!2.05e-18!126;UBERON:0004185!2.05e-18!126;UBERON:0002405!1.98e-15!70;UBERON:0000490!1.15e-13!66;UBERON:0003929!1.85e-13!55;UBERON:0005911!4.85e-12!69;UBERON:0005057!2.24e-11!51;UBERON:0005409!1.46e-10!59;UBERON:0009854!5.38e-10!23;UBERON:0009856!5.38e-10!23;UBERON:0002107!1.32e-09!22;UBERON:0007499!1.32e-09!22;UBERON:0006925!1.32e-09!22;UBERON:0009497!1.32e-09!22;UBERON:0000015!1.32e-09!22;UBERON:0002423!1.32e-09!22;UBERON:0006235!1.32e-09!22;UBERON:0008835!1.32e-09!22;UBERON:0003894!1.32e-09!22;UBERON:0004161!1.32e-09!22;UBERON:0008836!1.32e-09!22;UBERON:0004923!1.98e-09!24;UBERON:0000160!5.89e-09!43;UBERON:0000077!8.34e-09!97;UBERON:0001041!1.75e-08!92;UBERON:0002365!3.27e-08!25;UBERON:0002330!3.27e-08!25;UBERON:0000344!1.33e-07!15;UBERON:0002193!2.96e-07!48;UBERON:0003104!3.51e-07!131;UBERON:0009142!3.51e-07!131;UBERON:0001242!9.76e-07!13;UBERON:0000060!9.76e-07!13;UBERON:0001262!9.76e-07!13;UBERON:0004786!9.76e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.05e-21,118;UBERON:0000925,2.05e-21,118;UBERON:0006595,2.05e-21,118;UBERON:0001007,3.18e-20,116;UBERON:0001555,3.18e-20,116;UBERON:0007026,3.18e-20,116;UBERON:0004921,3.17e-19,114;UBERON:0000490,1.14e-13,66;UBERON:0003929,1.85e-13,55;UBERON:0005409,2.80e-12,47;UBERON:0005911,4.85e-12,69;UBERON:0000160,2.95e-11,31;UBERON:0009854,5.38e-10,23;UBERON:0009856,5.38e-10,23;UBERON:0002107,1.32e-09,22;UBERON:0007499,1.32e-09,22;UBERON:0006925,1.32e-09,22;UBERON:0009497,1.32e-09,22;UBERON:0000015,1.32e-09,22;UBERON:0002423,1.32e-09,22;UBERON:0006235,1.32e-09,22;UBERON:0008835,1.32e-09,22;UBERON:0003894,1.32e-09,22;UBERON:0004161,1.32e-09,22;UBERON:0008836,1.32e-09,22;UBERON:0004923,1.98e-09,24;UBERON:0001041,4.22e-09,80;UBERON:0002365,3.27e-08,25;UBERON:0002330,3.27e-08,25;UBERON:0005256,7.80e-08,45;UBERON:0000344,1.33e-07,15;UBERON:0002193,2.96e-07,48;UBERON:0002405,2.96e-07,48;UBERON:0001242,9.76e-07,13;UBERON:0001262,9.76e-07,13;UBERON:0004786,9.76e-07,13 | |||
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| |||
|short_description=p1@Lgals9 | |||
}} |
Revision as of 02:31, 4 August 2015
Short description: | p1@Lgals9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lgals9_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000108269, NM_001159301, NM_010708, uc007kkd.2, uc007kke.2_5end |
EntrezGene: | 16859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data