FFCP PHASE1:Hg19::chr3:127006887..127006889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr3:127006887..127006889,- | |||
|id=chr3:127006887..127006889,- | |||
|ontology_enrichment_celltype=CL:0002322!1.94e-11!5;CL:0000039!4.33e-11!7;CL:0000586!4.33e-11!7;CL:0000066!1.86e-07!254;CL:0000239!2.07e-07!3;CL:1000615!2.07e-07!3;CL:0002306!2.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.16e-09;7!CL:0000586;5.16e-09;7!CL:0002097;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.95e-09,7;CL:0000586,4.95e-09,7;CL:0002097,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.54e-23;10!UBERON:0005564;3.54e-23;10 | |||
|ontology_enrichment_disease=DOID:305!3.45e-12!106;DOID:0050687!1.63e-10!143;DOID:162!5.90e-10!235;DOID:14566!1.71e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.50e-12;5!DOID:3910;1.61e-08;2!DOID:3905;2.29e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.50e-12,5;DOID:3910,1.61e-08,2;DOID:3905,2.29e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.24e-10!8;UBERON:0003135!1.85e-07!11;UBERON:0006853!2.07e-07!3;UBERON:0007685!2.07e-07!3;UBERON:0004134!2.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.31e-29;8!UBERON:0003135;4.16e-21;11!UBERON:0000991;3.27e-11;21!UBERON:0003101;1.03e-10;22!UBERON:0000079;1.03e-10;22!UBERON:0004903;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.80e-29,8;UBERON:0003135,3.95e-21,11;UBERON:0000991,3.19e-11,21;UBERON:0009196,3.19e-11,21;UBERON:0009117,3.19e-11,21;UBERON:0005564,3.19e-11,21;UBERON:0004176,1.00e-10,22;UBERON:0003101,1.00e-10,22;UBERON:0000079,1.00e-10,22;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,1.03423704220986,1.29096936716765,0,0,0.272906150057846,0,0,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38779902917337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.132529768321485,0.464775771478074,2.59152637538426,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,8.39037045966129,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,9.47037542311303,0,0.664653872707185,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.543616824294456,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,15.5232494683528,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,7.021753835472,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0.214441591374926,0,0,0,0.97894681802587,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0.576169937778896,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.452888530700021,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.299823467774787,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.509944148709909,0.801652215796681,5.60558887162554,1.50424523575425,12.1245917149183,17.953596720464,0,0,0,0,0.129177819672012,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr3:127006887..127006889,- | |||
}} |
Revision as of 21:08, 21 January 2014
Short description: | p@chr3:127006887..127006889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:127006887..127006889, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.95e-09 | 7 |
germ cell | 4.95e-09 | 7 |
cortical cell of adrenal gland | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.80e-29 | 8 |
male reproductive organ | 3.95e-21 | 11 |
gonad | 3.19e-11 | 21 |
indifferent external genitalia | 3.19e-11 | 21 |
indifferent gonad | 3.19e-11 | 21 |
gonad primordium | 3.19e-11 | 21 |
external genitalia | 1.00e-10 | 22 |
male organism | 1.00e-10 | 22 |
male reproductive system | 1.00e-10 | 22 |
bronchoalveolar duct junction | 1.61e-08 | 2 |
alveolar duct | 1.61e-08 | 2 |
bronchiole | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.50e-12 | 5 |
lung adenocarcinoma | 1.61e-08 | 2 |
lung carcinoma | 2.29e-07 | 9 |