FFCP PHASE1:Hg19::chr3:189838119..189838136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19317 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVL5 | |||
|association_with_transcript=-10bp_to_AK001580_5end | |||
|description=CAGE_peak_5_at_LEPREL1_5end | |||
|id=chr3:189838119..189838136,- | |||
|ontology_enrichment_celltype=CL:0000066!5.63e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.25e-24;3!CL:0000064;3.34e-24;3!CL:0000067;3.34e-24;3!CL:0005012;3.34e-24;3!CL:0002304;3.34e-24;3!CL:0000306;9.08e-18;4!CL:0002222;9.08e-18;4!CL:0002224;9.08e-18;4!CL:0000075;7.37e-10;27!CL:0000946;1.60e-09;1!CL:0000786;1.60e-09;1!CL:0002174;3.17e-09;1!CL:0000501;3.17e-09;1!CL:0000319;7.26e-09;1!CL:0000451;5.09e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.64e-24,3;CL:0000064,3.91e-24,3;CL:0000067,3.91e-24,3;CL:0005012,3.91e-24,3;CL:0002304,3.91e-24,3;CL:0000306,1.18e-17,4;CL:0002222,1.18e-17,4;CL:0002224,1.18e-17,4;CL:0000075,8.19e-10,27;CL:0000946,1.60e-09,1;CL:0000786,1.60e-09,1;CL:0000980,1.60e-09,1;CL:0002174,4.19e-09,1;CL:0000501,4.19e-09,1;CL:0000319,6.72e-09,1;CL:0000451,5.31e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.39e-07!11;UBERON:0000970!2.58e-07!20;UBERON:0001801!5.91e-07!14;UBERON:0002104!8.29e-07!21;UBERON:0000488!9.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;7.32e-25;11!UBERON:0001778;3.34e-24;3!UBERON:0001775;3.34e-24;3!UBERON:0001801;1.90e-19;14!UBERON:0000488;2.60e-18;4!UBERON:0010077;9.08e-18;4!UBERON:0005389;9.08e-18;4!UBERON:0000484;9.08e-18;4!UBERON:0000965;9.08e-18;4!UBERON:0001803;9.08e-18;4!UBERON:0000019;3.26e-14;19!UBERON:0000047;3.26e-14;19!UBERON:0004088;3.26e-14;19!UBERON:0010230;3.26e-14;19!UBERON:0000970;1.76e-13;20!UBERON:0002104;8.15e-13;21!UBERON:0001456;8.15e-13;21!UBERON:0002203;2.14e-12;6!UBERON:0001768;2.14e-12;6!UBERON:0002200;2.14e-12;6!UBERON:0000020;1.17e-11;23!UBERON:0001032;3.74e-11;24!UBERON:0004456;3.74e-11;24!UBERON:0007195;7.26e-09;1!UBERON:0010371;2.57e-08;31!UBERON:0006876;5.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.62e-25,11;UBERON:0001778,3.91e-24,3;UBERON:0001775,3.91e-24,3;UBERON:0001801,2.35e-19,14;UBERON:0000488,2.93e-18,4;UBERON:0010077,1.18e-17,4;UBERON:0005389,1.18e-17,4;UBERON:0000484,1.18e-17,4;UBERON:0002546,1.18e-17,4;UBERON:0000965,1.18e-17,4;UBERON:0001803,1.18e-17,4;UBERON:0003073,1.18e-17,4;UBERON:0005426,1.18e-17,4;UBERON:0000076,2.01e-15,8;UBERON:0000019,2.04e-13,20;UBERON:0000047,2.04e-13,20;UBERON:0010312,2.04e-13,20;UBERON:0004088,2.04e-13,20;UBERON:0010230,2.04e-13,20;UBERON:0003072,2.04e-13,20;UBERON:0004128,2.04e-13,20;UBERON:0003071,2.04e-13,20;UBERON:0000970,9.36e-13,21;UBERON:0002104,9.36e-13,21;UBERON:0002203,2.31e-12,6;UBERON:0001768,2.31e-12,6;UBERON:0002200,2.31e-12,6;UBERON:0001456,3.74e-12,22;UBERON:0005085,2.17e-11,31;UBERON:0000020,4.22e-11,24;UBERON:0001032,4.22e-11,24;UBERON:0004456,4.22e-11,24;UBERON:0007195,1.07e-08,1;UBERON:0006876,5.88e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0.328402357799783,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.30361867064741,0,0.486634870302636,1.32348744029695,3.99112915432615,3.33772185633879,0.0654895377488563,0,0.370784442784429,0,0,0,2.38490624305342,3.43196946468077,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969876340912871,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0.580969714347592,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0.857839051492628,0,0,0.804231779293047,0.277765335475589,0,0,1.44331342025273,1.27523445472584,2.58299127318808,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,1.52249488594842,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0.385076685522074,0,0,0.73886140225013,0,0,0.647747748306418,0,0.541892875087706,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0,0,0,0,2.46169610922139,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70765727617876,0,0.173559738335131,0.391969589657511,0.783532859223623,0,0.343972064943233,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0,0,0.999048047910651,0,0.114536596165916,0,0,0,0,0,0,1.63197148218115,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,1.51293380256957,2.9080823662043,0.2249738915515,0,0,0,0.472834243795189,0.472091293214983,0,4.84075816198681,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0.453411851024545,0.463044948647668,0,0,0,0.438568099157414,0.353378291891762,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7562092961788,0.128458450192919,0,0,0,0.504143392443436,0,0,0,0.490738592505128,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.818859587550484,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0,0,0,7.37497520356987,0,0,0.131545547125698,0.118193840883968,0,0,0,0,0,1.07963795609311,0.47775168788705,0.214429632529969,0,0,0,0,0,0.6828739083758,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.392616934229891,0,0,0,0,1.4180735354187,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0.883164973845552,0,2.78736702225161,0.101988829741982,0,0,0.250707539292375,0,0,0.829169439458779,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0.332660356546013,0,0.747091421144008,0,0,0,0,0.813792356631477,0.665756774185513,0.201273793591026,0.641136984606466 | |||
|short_description=p5@LEPREL1 | |||
}} |
Revision as of 23:17, 21 January 2014
Short description: | p5@LEPREL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LEPREL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_AK001580_5end |
EntrezGene: | LEPREL1 |
HGNC: | 19317 |
UniProt: | Q8IVL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.64e-24 | 3 |
ciliated cell | 3.91e-24 | 3 |
ciliated epithelial cell | 3.91e-24 | 3 |
multi-ciliated epithelial cell | 3.91e-24 | 3 |
non-pigmented ciliary epithelial cell | 3.91e-24 | 3 |
crystallin accumulating cell | 1.18e-17 | 4 |
vertebrate lens cell | 1.18e-17 | 4 |
lens epithelial cell | 1.18e-17 | 4 |
columnar/cuboidal epithelial cell | 8.19e-10 | 27 |
antibody secreting cell | 1.60e-09 | 1 |
plasma cell | 1.60e-09 | 1 |
plasmablast | 1.60e-09 | 1 |
follicular cell of ovary | 4.19e-09 | 1 |
granulosa cell | 4.19e-09 | 1 |
mucus secreting cell | 6.72e-09 | 1 |
dendritic cell | 5.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 9.62e-25 | 11 |
ciliary epithelium | 3.91e-24 | 3 |
ciliary body | 3.91e-24 | 3 |
anterior segment of eyeball | 2.35e-19 | 14 |
atypical epithelium | 2.93e-18 | 4 |
cuboidal epithelium | 1.18e-17 | 4 |
transparent eye structure | 1.18e-17 | 4 |
simple cuboidal epithelium | 1.18e-17 | 4 |
cranial placode | 1.18e-17 | 4 |
lens of camera-type eye | 1.18e-17 | 4 |
epithelium of lens | 1.18e-17 | 4 |
lens placode | 1.18e-17 | 4 |
lens vesicle | 1.18e-17 | 4 |
external ectoderm | 2.01e-15 | 8 |
camera-type eye | 2.04e-13 | 20 |
simple eye | 2.04e-13 | 20 |
immature eye | 2.04e-13 | 20 |
ocular region | 2.04e-13 | 20 |
eyeball of camera-type eye | 2.04e-13 | 20 |
optic cup | 2.04e-13 | 20 |
optic vesicle | 2.04e-13 | 20 |
eye primordium | 2.04e-13 | 20 |
eye | 9.36e-13 | 21 |
visual system | 9.36e-13 | 21 |
vasculature of eye | 2.31e-12 | 6 |
uvea | 2.31e-12 | 6 |
vasculature of head | 2.31e-12 | 6 |
face | 3.74e-12 | 22 |
ectodermal placode | 2.17e-11 | 31 |
sense organ | 4.22e-11 | 24 |
sensory system | 4.22e-11 | 24 |
entire sense organ system | 4.22e-11 | 24 |
stroma of bone marrow | 1.07e-08 | 1 |
vasculature of organ | 5.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.72e-09 | 1 |