FFCP PHASE1:Mm9::chr13:29045783..29045789,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:29045783..29045789,+|id=chr13:29045783..29045789,+|ontology_enrichment_celltype=CL:0002563!1.42e-09!9;CL:0002251!1.42e-09!9;CL:0000548!2.05e-09!115;CL:0000004!2.05e-09!115;CL:0000255!2.05e-09!115;CL:0000066!2.92e-09!25;CL:0000144!3.59e-09!121;CL:0000012!3.59e-09!121;CL:0002609!5.86e-09!6;CL:0002371!6.16e-09!118;CL:0002321!4.07e-08!70;CL:0000220!4.07e-08!70|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-24,9;CL:0002251,1.35e-24,9;CL:0000066,3.23e-22,25;CL:0000223,7.27e-16,20;CL:0002076,7.70e-15,15;CL:0000239,1.11e-13,6;CL:0000677,1.11e-13,6;CL:0000584,1.11e-13,6;CL:0002250,4.82e-13,3;CL:0000682,1.24e-12,3;CL:0000075,8.06e-12,7;CL:0000213,2.48e-10,1;CL:0002078,2.48e-10,1;CL:0000115,2.48e-10,1;CL:0002262,2.48e-10,1;CL:1000398,2.48e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.42e-09!9;UBERON:0004808!1.42e-09!9;UBERON:0001277!1.42e-09!9;UBERON:0000485!1.95e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.35e-24,9;UBERON:0004808,1.35e-24,9;UBERON:0001277,1.35e-24,9;UBERON:0000485,3.62e-20,11;UBERON:0001242,4.26e-17,13;UBERON:0001262,4.26e-17,13;UBERON:0004786,4.26e-17,13;UBERON:0000344,7.70e-15,15;UBERON:0002394,2.48e-10,1;UBERON:0001281,2.48e-10,1;UBERON:0000353,2.48e-10,1;UBERON:0003497,2.48e-10,1;UBERON:0003909,2.48e-10,1;UBERON:0003928,2.48e-10,1;UBERON:0003835,2.48e-10,1;UBERON:0003513,2.48e-10,1;UBERON:0001280,2.48e-10,1;UBERON:0004647,2.48e-10,1;UBERON:0002294,2.48e-10,1;UBERON:0001173,2.48e-10,1;UBERON:0004912,2.48e-10,1;UBERON:0005171,2.48e-10,1;UBERON:0003929,7.25e-10,55;UBERON:0004923,2.58e-09,24;UBERON:0000490,3.83e-08,66;UBERON:0005911,9.10e-08,69;UBERON:0000160,3.22e-07,31|phase1_expression=0,0.697950815278722,0,1.20985684522732,0,2.85394762250213,2.10251376535973,0.387369970324729,1.40788722151667,1.87251621057595,0,0,0.513602189793617,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,3.44539178469012,0.430761996159075,1.07735616342945,0,0,0,0,0,0,2.88851619751275,0.664938581433969,5.9209113316087,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.420649922702764,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,3.18850937571846,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr13:29045783..29045789,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:29045783..29045789,+ | |||
|description=CAGE_peak_at_chr13:29045783..29045789,+ | |||
|id=chr13:29045783..29045789,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.42e-09!9;CL:0002251!1.42e-09!9;CL:0000548!2.05e-09!115;CL:0000004!2.05e-09!115;CL:0000255!2.05e-09!115;CL:0000066!2.92e-09!25;CL:0000144!3.59e-09!121;CL:0000012!3.59e-09!121;CL:0002609!5.86e-09!6;CL:0002371!6.16e-09!118;CL:0002321!4.07e-08!70;CL:0000220!4.07e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-24,9;CL:0002251,1.35e-24,9;CL:0000066,3.23e-22,25;CL:0000223,7.27e-16,20;CL:0002076,7.70e-15,15;CL:0000239,1.11e-13,6;CL:0000677,1.11e-13,6;CL:0000584,1.11e-13,6;CL:0002250,4.82e-13,3;CL:0000682,1.24e-12,3;CL:0000075,8.06e-12,7;CL:0000213,2.48e-10,1;CL:0002078,2.48e-10,1;CL:0000115,2.48e-10,1;CL:0002262,2.48e-10,1;CL:1000398,2.48e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.42e-09!9;UBERON:0004808!1.42e-09!9;UBERON:0001277!1.42e-09!9;UBERON:0000485!1.95e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.35e-24,9;UBERON:0004808,1.35e-24,9;UBERON:0001277,1.35e-24,9;UBERON:0000485,3.62e-20,11;UBERON:0001242,4.26e-17,13;UBERON:0001262,4.26e-17,13;UBERON:0004786,4.26e-17,13;UBERON:0000344,7.70e-15,15;UBERON:0002394,2.48e-10,1;UBERON:0001281,2.48e-10,1;UBERON:0000353,2.48e-10,1;UBERON:0003497,2.48e-10,1;UBERON:0003909,2.48e-10,1;UBERON:0003928,2.48e-10,1;UBERON:0003835,2.48e-10,1;UBERON:0003513,2.48e-10,1;UBERON:0001280,2.48e-10,1;UBERON:0004647,2.48e-10,1;UBERON:0002294,2.48e-10,1;UBERON:0001173,2.48e-10,1;UBERON:0004912,2.48e-10,1;UBERON:0005171,2.48e-10,1;UBERON:0003929,7.25e-10,55;UBERON:0004923,2.58e-09,24;UBERON:0000490,3.83e-08,66;UBERON:0005911,9.10e-08,69;UBERON:0000160,3.22e-07,31 | |||
|phase1_expression=0,0.697950815278722,0,1.20985684522732,0,2.85394762250213,2.10251376535973,0.387369970324729,1.40788722151667,1.87251621057595,0,0,0.513602189793617,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,3.44539178469012,0.430761996159075,1.07735616342945,0,0,0,0,0,0,2.88851619751275,0.664938581433969,5.9209113316087,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.420649922702764,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,3.18850937571846,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr13:29045783..29045789,+ | |||
}} |
Latest revision as of 21:08, 5 August 2015
Short description: | p@chr13:29045783..29045789, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29045783..29045789, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.35e-24 | 9 |
epithelial cell of alimentary canal | 1.35e-24 | 9 |
epithelial cell | 3.23e-22 | 25 |
endodermal cell | 7.27e-16 | 20 |
endo-epithelial cell | 7.70e-15 | 15 |
brush border epithelial cell | 1.11e-13 | 6 |
gut absorptive cell | 1.11e-13 | 6 |
enterocyte | 1.11e-13 | 6 |
intestinal crypt stem cell | 4.82e-13 | 3 |
M cell of gut | 1.24e-12 | 3 |
columnar/cuboidal epithelial cell | 8.06e-12 | 7 |
lining cell | 2.48e-10 | 1 |
meso-epithelial cell | 2.48e-10 | 1 |
endothelial cell | 2.48e-10 | 1 |
endothelial cell of sinusoid | 2.48e-10 | 1 |
endothelial cell of hepatic sinusoid | 2.48e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.35e-24 | 9 |
gastrointestinal system epithelium | 1.35e-24 | 9 |
intestinal epithelium | 1.35e-24 | 9 |
simple columnar epithelium | 3.62e-20 | 11 |
intestinal mucosa | 4.26e-17 | 13 |
wall of intestine | 4.26e-17 | 13 |
gastrointestinal system mucosa | 4.26e-17 | 13 |
mucosa | 7.70e-15 | 15 |
bile duct | 2.48e-10 | 1 |
hepatic sinusoid | 2.48e-10 | 1 |
parenchyma | 2.48e-10 | 1 |
abdomen blood vessel | 2.48e-10 | 1 |
sinusoid | 2.48e-10 | 1 |
digestive system duct | 2.48e-10 | 1 |
abdominal segment blood vessel | 2.48e-10 | 1 |
trunk blood vessel | 2.48e-10 | 1 |
liver parenchyma | 2.48e-10 | 1 |
liver lobule | 2.48e-10 | 1 |
biliary system | 2.48e-10 | 1 |
biliary tree | 2.48e-10 | 1 |
biliary bud | 2.48e-10 | 1 |
hepatic duct | 2.48e-10 | 1 |
gut epithelium | 7.25e-10 | 55 |
organ component layer | 2.58e-09 | 24 |
unilaminar epithelium | 3.83e-08 | 66 |
endo-epithelium | 9.10e-08 | 69 |
intestine | 3.22e-07 | 31 |