FFCP PHASE1:Hg19::chr3:5229339..5229353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18967 | |||
|TSSclassifier=strong | |||
|UniProt=Q92611 | |||
|association_with_transcript=-4bp_to_ENST00000256497_5end | |||
|description=CAGE_peak_3_at_EDEM1_5end | |||
|id=chr3:5229339..5229353,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.38e-13!119;CL:0000738!1.55e-11!140;CL:0002031!3.43e-11!124;CL:0000542!1.13e-08!53;CL:0000051!1.13e-08!53;CL:0000838!1.55e-08!52;CL:0000037!6.31e-08!172;CL:0000566!6.31e-08!172;CL:0002032!1.02e-07!165;CL:0000837!1.02e-07!165;CL:0002057!2.37e-07!42;CL:0000988!4.37e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.41e-13;33!CL:0002057;5.41e-13;33!CL:0000473;2.62e-09;39!CL:0000234;2.62e-09;39!CL:0000084;3.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.79e-17,115;CL:0002031,2.42e-15,120;CL:0000738,2.65e-15,136;CL:0000542,8.34e-11,53;CL:0000051,8.34e-11,53;CL:0000860,1.02e-10,42;CL:0002057,1.02e-10,42;CL:0000838,1.30e-10,52;CL:0000037,1.72e-10,168;CL:0002032,2.22e-10,161;CL:0000837,2.22e-10,161;CL:0000988,1.40e-09,177;CL:0000473,3.13e-09,48;CL:0000234,3.13e-09,48;CL:0000084,5.78e-08,25;CL:0000827,5.78e-08,25;CL:0002194,1.61e-07,59;CL:0000576,1.61e-07,59;CL:0000040,1.61e-07,59;CL:0000559,1.61e-07,59;CL:0002009,6.18e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.45e-09,98;UBERON:0003061,5.45e-09,98;UBERON:0002193,3.87e-08,108;UBERON:0002405,8.77e-07,93 | |||
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| |||
|short_description=p3@EDEM1 | |||
}} |
Revision as of 17:06, 21 January 2014
Short description: | p3@EDEM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDEM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000256497_5end |
EntrezGene: | EDEM1 |
HGNC: | 18967 |
UniProt: | Q92611 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.79e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.42e-15 | 120 |
leukocyte | 2.65e-15 | 136 |
lymphocyte | 8.34e-11 | 53 |
common lymphoid progenitor | 8.34e-11 | 53 |
classical monocyte | 1.02e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-10 | 42 |
lymphoid lineage restricted progenitor cell | 1.30e-10 | 52 |
hematopoietic stem cell | 1.72e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.22e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.22e-10 | 161 |
hematopoietic cell | 1.40e-09 | 177 |
defensive cell | 3.13e-09 | 48 |
phagocyte | 3.13e-09 | 48 |
T cell | 5.78e-08 | 25 |
pro-T cell | 5.78e-08 | 25 |
monopoietic cell | 1.61e-07 | 59 |
monocyte | 1.61e-07 | 59 |
monoblast | 1.61e-07 | 59 |
promonocyte | 1.61e-07 | 59 |
macrophage dendritic cell progenitor | 6.18e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.45e-09 | 98 |
blood island | 5.45e-09 | 98 |
hemolymphoid system | 3.87e-08 | 108 |
immune system | 8.77e-07 | 93 |