FFCP PHASE1:Hg19::chr4:172184475..172184476,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:172184475..172184476,+ | |||
|id=chr4:172184475..172184476,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.90e-11!42;CL:0000860!8.88e-10!45;CL:0002539!2.40e-07!10;CL:0002194!6.70e-07!63;CL:0000576!6.70e-07!63;CL:0000040!6.70e-07!63;CL:0000559!6.70e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0002539;9.56e-16;10!CL:0000815;1.17e-09;2!CL:0000792;1.17e-09;2!CL:0002677;1.17e-09;2!CL:0002600;1.64e-09;2!CL:0000898;7.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,9.56e-16,10;CL:0000815,1.22e-09,2;CL:0000792,1.22e-09,2;CL:0002677,1.22e-09,2;CL:0002600,1.57e-09,2;CL:0000898,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.56e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.85e-10!9;UBERON:0004237!2.40e-07!10;UBERON:0004695!2.40e-07!10;UBERON:0002111!2.40e-07!10;UBERON:0004178!2.40e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;2.59e-17;4!UBERON:0004237;9.56e-16;10!UBERON:0004695;9.56e-16;10!UBERON:0002111;9.56e-16;10!UBERON:0004178;9.56e-16;10!UBERON:0001135;1.04e-10;15!UBERON:0000947;8.27e-08;21!UBERON:0010191;8.27e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.86e-17,4;UBERON:0004237,9.56e-16,10;UBERON:0004695,9.56e-16,10;UBERON:0002111,9.56e-16,10;UBERON:0004178,9.56e-16,10;UBERON:0001135,1.04e-10,15;UBERON:0000947,8.27e-08,21;UBERON:0010191,8.27e-08,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,3.36162573225888,9.04041792035965,2.92124036154949,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,6.77132432971709,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,2.06224135232386,1.10766947291811,0,0,0,0,0,0.579606171470105,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55924488638614,0,0,0,0,0,1.79921244865442,0,1.65882483136342,0,0.521745061811734,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:172184475..172184476,+ | |||
}} |
Revision as of 03:59, 22 January 2014
Short description: | p@chr4:172184475..172184476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:172184475..172184476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.56e-16 | 10 |
regulatory T cell | 1.22e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.22e-09 | 2 |
naive regulatory T cell | 1.22e-09 | 2 |
smooth muscle cell of trachea | 1.57e-09 | 2 |
naive T cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.86e-17 | 4 |
blood vessel smooth muscle | 9.56e-16 | 10 |
arterial system smooth muscle | 9.56e-16 | 10 |
artery smooth muscle tissue | 9.56e-16 | 10 |
aorta smooth muscle tissue | 9.56e-16 | 10 |
smooth muscle tissue | 1.04e-10 | 15 |
aorta | 8.27e-08 | 21 |
aortic system | 8.27e-08 | 21 |