FFCP PHASE1:Hg19::chr4:47857451..47857469,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:47857451..47857469,- | |||
|id=chr4:47857451..47857469,- | |||
|ontology_enrichment_celltype=CL:0002551!2.27e-21!6;CL:0000055!2.00e-16!180;CL:0000057!2.56e-14!75;CL:0002620!1.09e-13!23;CL:0000594!8.87e-11!3;CL:0000048!1.59e-09!430;CL:0000188!2.40e-09!9;CL:0000723!3.05e-09!436;CL:0000034!7.08e-09!444;CL:0002367!1.55e-08!2;CL:0002371!6.72e-08!591;CL:0002552!2.42e-07!5;CL:0000144!8.30e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002561;8.69e-23;2!CL:0002551;1.95e-16;6!CL:0002556;2.11e-16;6!CL:0002521;7.27e-15;3!CL:0002620;2.83e-11;23!CL:0000057;2.77e-10;73!CL:0002559;1.10e-09;5!CL:0002552;2.27e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,8.70e-23,2;CL:0002551,1.90e-16,6;CL:0002556,2.11e-16,6;CL:0000057,4.40e-15,76;CL:0002521,7.02e-15,3;CL:0002620,2.93e-11,23;CL:0002559,1.10e-09,5;CL:0002552,1.92e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.36e-07!5;DOID:450!4.36e-07!5;DOID:66!4.36e-07!5;DOID:423!4.36e-07!5;DOID:0080000!4.36e-07!5;DOID:11722!4.36e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.59e-09;5!DOID:450;3.59e-09;5!DOID:66;3.59e-09;5!DOID:423;3.59e-09;5!DOID:0080000;3.59e-09;5!DOID:11722;3.59e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.90e-09,5;DOID:450,3.90e-09,5;DOID:66,3.90e-09,5;DOID:423,3.90e-09,5;DOID:0080000,3.90e-09,5;DOID:11722,3.90e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.24e-15!83;UBERON:0002329!5.24e-15!83;UBERON:0003077!5.24e-15!83;UBERON:0003059!5.24e-15!83;UBERON:0007282!5.24e-15!83;UBERON:0009618!5.24e-15!83;UBERON:0007285!5.24e-15!83;UBERON:0003102!2.04e-14!95;UBERON:0002067!5.08e-14!9;UBERON:0004016!5.08e-14!9;UBERON:0010083!5.08e-14!9;UBERON:0004290!1.05e-11!70;UBERON:0002199!9.44e-11!45;UBERON:0002416!9.44e-11!45;UBERON:0000486!2.19e-09!82;UBERON:0002097!1.14e-08!40;UBERON:0005969!1.55e-08!2;UBERON:0003956!1.55e-08!2;UBERON:0005256!3.68e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;8.69e-23;2!UBERON:0005942;8.69e-23;2!UBERON:0005932;8.69e-23;2!UBERON:0001758;2.11e-16;6!UBERON:0003672;2.11e-16;6!UBERON:0002190;7.27e-15;3!UBERON:0003129;3.80e-14;7!UBERON:0002199;3.54e-11;46!UBERON:0002416;3.54e-11;46!UBERON:0002067;3.74e-11;9!UBERON:0003102;4.92e-11;50!UBERON:0002097;2.77e-10;41!UBERON:0002073;1.10e-09;5!UBERON:0000165;2.58e-09;28!UBERON:0002072;2.74e-09;5!UBERON:0011137;3.34e-09;11!UBERON:0010323;3.34e-09;11!UBERON:0001444;2.87e-08;48!UBERON:0007811;3.03e-08;52!UBERON:0000033;1.45e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,8.70e-23,2;UBERON:0005942,8.70e-23,2;UBERON:0005932,8.70e-23,2;UBERON:0003102,1.05e-21,99;UBERON:0002199,2.35e-17,46;UBERON:0002416,2.35e-17,46;UBERON:0001758,2.11e-16,6;UBERON:0003672,2.11e-16,6;UBERON:0002190,7.02e-15,3;UBERON:0003129,3.80e-14,7;UBERON:0002097,5.90e-12,41;UBERON:0002067,3.68e-11,9;UBERON:0004016,3.68e-11,9;UBERON:0010083,3.68e-11,9;UBERON:0001444,6.90e-10,49;UBERON:0002073,1.10e-09,5;UBERON:0005086,1.10e-09,5;UBERON:0002072,2.68e-09,5;UBERON:0010323,3.34e-09,11;UBERON:0000165,5.09e-09,29;UBERON:0000930,5.09e-09,29;UBERON:0000033,1.45e-08,56;UBERON:0000153,1.14e-07,62;UBERON:0007811,1.14e-07,62;UBERON:0011137,2.46e-07,14 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,1.26343974685366,0,0,0,0,0,0.618831764800233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.937285727335186,2.80944069147288,1.1409436430889,5.38015249986484,0.23486899728753,0.161872944368132,0.98315564691574,4.49139176760765,0.737005903870608,1.85986406116378,0,0,0,0,2.86171393721913,1.12606667884768,4.15596173226274,0,0,0,0,0,0,1.27159140695737,0.300091096084402,1.03052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.9724248751659,17.3251075600701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0,0,0,0.26593811658487,0,2.05765899409714,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02693829334611,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.737476674166813,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.551346289938122,0.751941714077915,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,3.14941248220485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:47857451..47857469,- | |||
}} |
Revision as of 00:58, 22 January 2014
Short description: | p@chr4:47857451..47857469, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:47857451..47857469, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 8.70e-23 | 2 |
fibroblast of dermis | 1.90e-16 | 6 |
fibroblast of periodontium | 2.11e-16 | 6 |
fibroblast | 4.40e-15 | 76 |
subcutaneous fat cell | 7.02e-15 | 3 |
skin fibroblast | 2.93e-11 | 23 |
hair follicle cell | 1.10e-09 | 5 |
fibroblast of gingiva | 1.92e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 8.70e-23 | 2 |
hair outer root sheath | 8.70e-23 | 2 |
bulb of hair follicle | 8.70e-23 | 2 |
surface structure | 1.05e-21 | 99 |
integument | 2.35e-17 | 46 |
integumental system | 2.35e-17 | 46 |
periodontium | 2.11e-16 | 6 |
dentition | 2.11e-16 | 6 |
subcutaneous adipose tissue | 7.02e-15 | 3 |
skull | 3.80e-14 | 7 |
skin of body | 5.90e-12 | 41 |
dermis | 3.68e-11 | 9 |
dermatome | 3.68e-11 | 9 |
future dermis | 3.68e-11 | 9 |
subdivision of head | 6.90e-10 | 49 |
hair follicle | 1.10e-09 | 5 |
hair follicle placode | 1.10e-09 | 5 |
hypodermis | 2.68e-09 | 5 |
cranial skeletal system | 3.34e-09 | 11 |
mouth | 5.09e-09 | 29 |
stomodeum | 5.09e-09 | 29 |
head | 1.45e-08 | 56 |
anterior region of body | 1.14e-07 | 62 |
craniocervical region | 1.14e-07 | 62 |
axial skeletal system | 2.46e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.90e-09 | 5 |
myotonic disease | 3.90e-09 | 5 |
muscle tissue disease | 3.90e-09 | 5 |
myopathy | 3.90e-09 | 5 |
muscular disease | 3.90e-09 | 5 |
myotonic dystrophy | 3.90e-09 | 5 |