FFCP PHASE1:Mm9::chr15:97998704..97998721,+: Difference between revisions
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{{FFCP|EntrezGene=239650|HGNC=|MCL_coexpression_id=3026|UniProt=Q8BMK5|association_with_transcript=467bp_to_ENSMUST00000031914,NM_177716,uc011zys.1_5end|description=CAGE_peak_4_at_AI836003_5end|id=chr15:97998704..97998721,+|ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000540!5.02e-08!33;CL:0000047!5.02e-08!33;CL:0000031!5.02e-08!33;CL:0000404!5.02e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000682,4.51e-11,3;CL:0000349,9.60e-11,3;CL:0000351,9.60e-11,3;CL:0002612,6.46e-10,3;CL:0002610,1.14e-09,3;CL:0000540,3.41e-09,33;CL:0000047,3.41e-09,33;CL:0000031,3.41e-09,33;CL:0000404,3.41e-09,33;CL:0000239,3.97e-09,6;CL:0000677,3.97e-09,6;CL:0000584,3.97e-09,6;CL:0000075,7.92e-08,7;CL:0000393,1.75e-07,39;CL:0000211,1.75e-07,39;CL:0002321,4.36e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.51e-08!73;UBERON:0005743!2.51e-08!73;UBERON:0000073!8.35e-08!75;UBERON:0001016!8.35e-08!75;UBERON:0003076!3.29e-07!12;UBERON:0003057!3.29e-07!12;UBERON:0001049!8.80e-07!52;UBERON:0005068!8.80e-07!52;UBERON:0006241!8.80e-07!52;UBERON:0007135!8.80e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.60e-11,3;UBERON:0000307,9.60e-11,3;UBERON:0007010,9.60e-11,3;UBERON:0000344,2.62e-10,15;UBERON:0002257,6.46e-10,3;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0002240,1.37e-08,6;UBERON:0005174,1.37e-08,6;UBERON:0001137,1.37e-08,6;UBERON:0001962,6.33e-08,2;UBERON:0001961,6.33e-08,2;UBERON:0001744,6.33e-08,2;UBERON:0004923,6.74e-08,24|phase1_expression=0.160148847104794,2.09385244583617,2.72999543633722,0,0,1.17515490338323,3.03696432774183,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,2.75291137280604,2.29692785646008,2.15380998079537,5.17130958446134,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0,0,1.10115880999389,1.40456071893706,1.22885226604995,1.18697658957174,0.640413505216868,1.04182674111352,1.11673199600552,1.12552522006336,0.30559649555362,1.47314292736834,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.748953197024114,0,0,0.695297280769106,0,1.45451631191692,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0.787056926989615,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,2.11204537257339,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,5.10567692760349,1.07656627931371,16.1169231709515,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0.561142271657738,0.355905054372522,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@AI836003}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:239650 | |||
|HGNC= | |||
|MCL_coexpression_id=3026 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BMK5 | |||
|association_with_transcript=467bp_to_ENSMUST00000031914,NM_177716,uc011zys.1_5end | |||
|cluster_id=chr15:97998704..97998721,+ | |||
|description=CAGE_peak_4_at_AI836003_5end | |||
|id=chr15:97998704..97998721,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23;CL:0000540!5.02e-08!33;CL:0000047!5.02e-08!33;CL:0000031!5.02e-08!33;CL:0000404!5.02e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000682,4.51e-11,3;CL:0000349,9.60e-11,3;CL:0000351,9.60e-11,3;CL:0002612,6.46e-10,3;CL:0002610,1.14e-09,3;CL:0000540,3.41e-09,33;CL:0000047,3.41e-09,33;CL:0000031,3.41e-09,33;CL:0000404,3.41e-09,33;CL:0000239,3.97e-09,6;CL:0000677,3.97e-09,6;CL:0000584,3.97e-09,6;CL:0000075,7.92e-08,7;CL:0000393,1.75e-07,39;CL:0000211,1.75e-07,39;CL:0002321,4.36e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-08!73;UBERON:0005743!2.51e-08!73;UBERON:0000073!8.35e-08!75;UBERON:0001016!8.35e-08!75;UBERON:0003076!3.29e-07!12;UBERON:0003057!3.29e-07!12;UBERON:0001049!8.80e-07!52;UBERON:0005068!8.80e-07!52;UBERON:0006241!8.80e-07!52;UBERON:0007135!8.80e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.60e-11,3;UBERON:0000307,9.60e-11,3;UBERON:0007010,9.60e-11,3;UBERON:0000344,2.62e-10,15;UBERON:0002257,6.46e-10,3;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0002240,1.37e-08,6;UBERON:0005174,1.37e-08,6;UBERON:0001137,1.37e-08,6;UBERON:0001962,6.33e-08,2;UBERON:0001961,6.33e-08,2;UBERON:0001744,6.33e-08,2;UBERON:0004923,6.74e-08,24 | |||
|phase1_expression=0.160148847104794,2.09385244583617,2.72999543633722,0,0,1.17515490338323,3.03696432774183,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,2.75291137280604,2.29692785646008,2.15380998079537,5.17130958446134,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0,0,1.10115880999389,1.40456071893706,1.22885226604995,1.18697658957174,0.640413505216868,1.04182674111352,1.11673199600552,1.12552522006336,0.30559649555362,1.47314292736834,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.748953197024114,0,0,0.695297280769106,0,1.45451631191692,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0.787056926989615,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0.304464949114599,2.11204537257339,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,5.10567692760349,1.07656627931371,16.1169231709515,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0.561142271657738,0.355905054372522,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@AI836003 | |||
}} |
Revision as of 23:07, 5 August 2015
Short description: | p4@AI836003 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AI836003_5end |
Coexpression cluster: | MCL_coexpression_mm9:3026 |
Association with transcript: | 467bp_to_ENSMUST00000031914, NM_177716, uc011zys.1_5end |
EntrezGene: | 239650 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.90e-14 | 23 |
M cell of gut | 4.51e-11 | 3 |
extraembryonic cell | 9.60e-11 | 3 |
trophoblast cell | 9.60e-11 | 3 |
neuron of the ventral spinal cord | 6.46e-10 | 3 |
raphe nuclei neuron | 1.14e-09 | 3 |
neuron | 3.41e-09 | 33 |
neuronal stem cell | 3.41e-09 | 33 |
neuroblast | 3.41e-09 | 33 |
electrically signaling cell | 3.41e-09 | 33 |
brush border epithelial cell | 3.97e-09 | 6 |
gut absorptive cell | 3.97e-09 | 6 |
enterocyte | 3.97e-09 | 6 |
columnar/cuboidal epithelial cell | 7.92e-08 | 7 |
electrically responsive cell | 1.75e-07 | 39 |
electrically active cell | 1.75e-07 | 39 |
embryonic cell | 4.36e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 9.60e-11 | 3 |
blastula | 9.60e-11 | 3 |
cleaving embryo | 9.60e-11 | 3 |
mucosa | 2.62e-10 | 15 |
ventral horn of spinal cord | 6.46e-10 | 3 |
raphe nuclei | 1.14e-09 | 3 |
reticular formation | 1.14e-09 | 3 |
spinal cord | 1.37e-08 | 6 |
dorsal region element | 1.37e-08 | 6 |
dorsum | 1.37e-08 | 6 |
gut-associated lymphoid tissue | 6.33e-08 | 2 |
mucosa-associated lymphoid tissue | 6.33e-08 | 2 |
lymphoid tissue | 6.33e-08 | 2 |
organ component layer | 6.74e-08 | 24 |