FFCP PHASE1:Hg19::chr5:128795366..128795383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2569 | |||
|description=CAGE_peak_at_chr5:128795366..128795383,+ | |||
|id=chr5:128795366..128795383,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.65e-15!5;CL:0002563!8.52e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.38e-42;5!CL:0002321;9.76e-20;15!CL:0000148;1.43e-13;10!CL:0000540;1.52e-13;6!CL:0000404;1.52e-13;6!CL:0000147;9.56e-10;14!CL:0000710;7.34e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.38e-42,5;CL:0000148,1.41e-13,10;CL:0000541,1.41e-13,10;CL:0000540,1.52e-13,6;CL:0000031,1.52e-13,6;CL:0000404,1.52e-13,6;CL:0000047,2.74e-10,8;CL:0000133,7.24e-10,59;CL:0000147,9.45e-10,14;CL:0000221,6.68e-08,72;CL:0000710,7.28e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;1.52e-13;6!UBERON:0003124;2.36e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!1.25e-07!4;DOID:1612!1.25e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.88e-20;4!DOID:1612;8.88e-20;4!DOID:0050619;1.31e-09;1!DOID:1357;1.31e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.33e-20,4;DOID:1612,8.33e-20,4;DOID:0050619,1.25e-09,1;DOID:1357,1.25e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003101!2.46e-08!22;UBERON:0000079!2.46e-08!22;UBERON:0007023!5.70e-07!115;UBERON:0001242!8.52e-07!4;UBERON:0001262!8.52e-07!4;UBERON:0004786!8.52e-07!4;UBERON:0004808!8.52e-07!4;UBERON:0001277!8.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.31e-09;1!UBERON:0001825;1.31e-09;1!UBERON:0006834;2.36e-09;1!UBERON:0000310;3.14e-08;10!UBERON:0001443;1.60e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.25e-09,1;UBERON:0001825,1.25e-09,1;UBERON:0006834,2.08e-09,1;UBERON:0000310,3.07e-08,10;UBERON:0001443,1.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0018439026268,10.6023814657188,10.3412609153871,6.42698541095297,12.6160425437814,5.47466038613745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7551099489819,18.0282094039923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0.68888668898764,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,5.09059555033366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6876996995342,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.60298219312704,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,11.6495949527454,0,0,0,0,0,0,0.272406812223151,16.396821143432,13.8914830963206,15.786732845109,0,0,0.121499113316049,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65394746500843,0,0,0,0,0,0,0,0,0,0,0,0,8.84018274526033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,5.67890118598472,0,0,0,0,0,0,0,0,4.2874366829448,0.385375350578757,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,25.1869762946881,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.655593431782173,0.253397002022874,0,4.54269588951453,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.833621662743,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p@chr5:128795366..128795383,+ | |||
}} |
Revision as of 07:14, 22 January 2014
Short description: | p@chr5:128795366..128795383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:128795366..128795383, + |
Coexpression cluster: | C2569_small_MCF7_iPS_H9_hepatoblastoma_merkel_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.38e-42 | 5 |
melanocyte | 1.41e-13 | 10 |
melanoblast | 1.41e-13 | 10 |
neuron | 1.52e-13 | 6 |
neuroblast | 1.52e-13 | 6 |
electrically signaling cell | 1.52e-13 | 6 |
neuronal stem cell | 2.74e-10 | 8 |
neurectodermal cell | 7.24e-10 | 59 |
pigment cell | 9.45e-10 | 14 |
ectodermal cell | 6.68e-08 | 72 |
neurecto-epithelial cell | 7.28e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.25e-09 | 1 |
paranasal sinus | 1.25e-09 | 1 |
uterus or analog | 2.08e-09 | 1 |
breast | 3.07e-08 | 10 |
chest | 1.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.33e-20 | 4 |
breast cancer | 8.33e-20 | 4 |
paranasal sinus cancer | 1.25e-09 | 1 |
maxillary sinus cancer | 1.25e-09 | 1 |