FFCP PHASE1:Mm9::chr17:36003877..36003891,+: Difference between revisions
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{{FFCP|EntrezGene=76448|HGNC=|UniProt=Q8BQ30|association_with_transcript=272bp_to_ENSMUST00000113814_5end|description=CAGE_peak_16_at_Ppp1r18_5end|id=chr17:36003877..36003891,+|ontology_enrichment_celltype=CL:0002320!5.94e-09!46;CL:0000134!5.94e-09!46;CL:0000034!1.55e-08!97;CL:0000219!2.66e-08!54;CL:0000988!7.91e-08!32;CL:0002032!7.91e-08!32;CL:0000037!7.91e-08!32;CL:0000566!7.91e-08!32;CL:0000837!7.91e-08!32;CL:0000738!6.71e-07!17;CL:0002087!6.71e-07!17;CL:0002031!9.66e-07!25|ontology_enrichment_celltype_v019_2=CL:0000034,4.76e-10,97;CL:0002320,5.85e-09,46;CL:0000134,5.85e-09,46;CL:0000988,1.86e-08,32;CL:0002032,1.86e-08,32;CL:0000037,1.86e-08,32;CL:0000837,1.86e-08,32;CL:0000219,2.08e-07,54;CL:0002494,4.17e-07,3;CL:0000737,4.17e-07,3;CL:0000746,4.17e-07,3;CL:0000513,4.17e-07,3;CL:0000738,8.47e-07,17;CL:0002087,8.47e-07,17;CL:0000557,8.68e-07,7;CL:0000723,9.21e-07,91;CL:0000048,9.21e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.81e-09!32;UBERON:0002384!5.94e-09!46;UBERON:0003081!7.15e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.85e-09,46;UBERON:0002204,1.15e-08,32;UBERON:0001474,1.49e-07,22;UBERON:0004765,1.49e-07,22;UBERON:0001434,1.49e-07,22;UBERON:0002371,1.69e-07,16|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.16210991097419,1.12630977721333,0.70219357896598,0.171217968225505,0.159544317990673,0.342401459862411,0.611942816932982,0.333109761815663,0,0.699561878128147,0.630924330716475,0.822686601634433,1.27316895539409,0.0850432901510698,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.881277725829041,0.709638518536602,0.734187008646726,0,0,0,0.388859798148567,0.139986421625363,0,1.17447824240415,0.725362142011344,0.672187598284928,1.54355661621568,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0,0,0.449949858640699,3.9554654502679,0.7104801149461,1.19840044207362,0.768436610643109,0.311068836925433,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.454357159999104,0.302286240427142,6.95674772884027,0.860423876981386,0,0,0,0,0.280888840263504,0.852151612890289,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0.718890747035522,0,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,1.40442637462647,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0,0.289298117163023,3.01582567878545,0,0,0.275936746304732,0,0,0.655739781506702,0.252470927204373,0.631016438832513,0,0.430846795465598,0,1.11399337041197,0.566153061577665,0,0.584511715822624,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0,0.915112692826091,1.5298058699447,1.11961161858926,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.57386499620653,0,0.231867835620421|short_description=p16@Ppp1r18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76448 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BQ30 | |||
|association_with_transcript=272bp_to_ENSMUST00000113814_5end | |||
|cluster_id=chr17:36003877..36003891,+ | |||
|description=CAGE_peak_16_at_Ppp1r18_5end | |||
|id=chr17:36003877..36003891,+ | |||
|ontology_enrichment_celltype=CL:0002320!5.94e-09!46;CL:0000134!5.94e-09!46;CL:0000034!1.55e-08!97;CL:0000219!2.66e-08!54;CL:0000988!7.91e-08!32;CL:0002032!7.91e-08!32;CL:0000037!7.91e-08!32;CL:0000566!7.91e-08!32;CL:0000837!7.91e-08!32;CL:0000738!6.71e-07!17;CL:0002087!6.71e-07!17;CL:0002031!9.66e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.76e-10,97;CL:0002320,5.85e-09,46;CL:0000134,5.85e-09,46;CL:0000988,1.86e-08,32;CL:0002032,1.86e-08,32;CL:0000037,1.86e-08,32;CL:0000837,1.86e-08,32;CL:0000219,2.08e-07,54;CL:0002494,4.17e-07,3;CL:0000737,4.17e-07,3;CL:0000746,4.17e-07,3;CL:0000513,4.17e-07,3;CL:0000738,8.47e-07,17;CL:0002087,8.47e-07,17;CL:0000557,8.68e-07,7;CL:0000723,9.21e-07,91;CL:0000048,9.21e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.81e-09!32;UBERON:0002384!5.94e-09!46;UBERON:0003081!7.15e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.85e-09,46;UBERON:0002204,1.15e-08,32;UBERON:0001474,1.49e-07,22;UBERON:0004765,1.49e-07,22;UBERON:0001434,1.49e-07,22;UBERON:0002371,1.69e-07,16 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.16210991097419,1.12630977721333,0.70219357896598,0.171217968225505,0.159544317990673,0.342401459862411,0.611942816932982,0.333109761815663,0,0.699561878128147,0.630924330716475,0.822686601634433,1.27316895539409,0.0850432901510698,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.881277725829041,0.709638518536602,0.734187008646726,0,0,0,0.388859798148567,0.139986421625363,0,1.17447824240415,0.725362142011344,0.672187598284928,1.54355661621568,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0,0,0.449949858640699,3.9554654502679,0.7104801149461,1.19840044207362,0.768436610643109,0.311068836925433,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.454357159999104,0.302286240427142,6.95674772884027,0.860423876981386,0,0,0,0,0.280888840263504,0.852151612890289,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0.718890747035522,0,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,1.40442637462647,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0,0.289298117163023,3.01582567878545,0,0,0.275936746304732,0,0,0.655739781506702,0.252470927204373,0.631016438832513,0,0.430846795465598,0,1.11399337041197,0.566153061577665,0,0.584511715822624,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0,0.915112692826091,1.5298058699447,1.11961161858926,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.57386499620653,0,0.231867835620421 | |||
|short_description=p16@Ppp1r18 | |||
}} |
Revision as of 20:15, 4 August 2015
Short description: | p16@Ppp1r18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Ppp1r18_5end |
Coexpression cluster: | NA |
Association with transcript: | 272bp_to_ENSMUST00000113814_5end |
EntrezGene: | 76448 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.76e-10 | 97 |
connective tissue cell | 5.85e-09 | 46 |
mesenchymal cell | 5.85e-09 | 46 |
hematopoietic cell | 1.86e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-08 | 32 |
hematopoietic stem cell | 1.86e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-08 | 32 |
motile cell | 2.08e-07 | 54 |
cardiocyte | 4.17e-07 | 3 |
striated muscle cell | 4.17e-07 | 3 |
cardiac muscle cell | 4.17e-07 | 3 |
cardiac muscle myoblast | 4.17e-07 | 3 |
leukocyte | 8.47e-07 | 17 |
nongranular leukocyte | 8.47e-07 | 17 |
granulocyte monocyte progenitor cell | 8.68e-07 | 7 |
somatic stem cell | 9.21e-07 | 91 |
multi fate stem cell | 9.21e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.85e-09 | 46 |
musculoskeletal system | 1.15e-08 | 32 |
bone element | 1.49e-07 | 22 |
skeletal element | 1.49e-07 | 22 |
skeletal system | 1.49e-07 | 22 |
bone marrow | 1.69e-07 | 16 |