FFCP PHASE1:Hg19::chr5:35048047..35048059,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14412 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDL7 | |||
|association_with_transcript=-7bp_to_ENST00000510428_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AGXT2_5end | |||
|id=chr5:35048047..35048059,- | |||
|ontology_enrichment_celltype=CL:0000181!6.08e-18!12;CL:0000417!6.08e-18!12;CL:0000668!6.08e-18!12;CL:0000414!6.08e-18!12;CL:0000412!6.08e-18!12;CL:0000182!6.08e-18!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.76e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.76e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.55e-11;1!UBERON:0004161;3.11e-09;11!UBERON:0003104;1.89e-08;31!UBERON:0009497;6.87e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.98e-20!19;UBERON:0006925!8.98e-20!19;UBERON:0008836!8.98e-20!19;UBERON:0005172!4.28e-19!55;UBERON:0005173!4.28e-19!55;UBERON:0009497!1.32e-18!25;UBERON:0000015!1.32e-18!25;UBERON:0002423!1.32e-18!25;UBERON:0006235!1.32e-18!25;UBERON:0004161!1.32e-18!25;UBERON:0005057!9.57e-18!26;UBERON:0002417!6.15e-17!61;UBERON:0000916!6.15e-17!61;UBERON:0008835!6.45e-17!22;UBERON:0003894!6.45e-17!22;UBERON:0009854!3.94e-16!23;UBERON:0007499!9.57e-15!25;UBERON:0009856!3.92e-14!26;UBERON:0003929!5.22e-14!54;UBERON:0002368!7.90e-13!35;UBERON:0002365!1.16e-11!31;UBERON:0002330!1.16e-11!31;UBERON:0001007!3.56e-10!155;UBERON:0001555!3.56e-10!155;UBERON:0007026!3.56e-10!155;UBERON:0004921!4.53e-10!129;UBERON:0004185!4.53e-10!129;UBERON:0000160!6.35e-10!27;UBERON:0005409!1.05e-09!35;UBERON:0000949!1.19e-09!45;UBERON:0009569!3.77e-09!113;UBERON:0004119!5.10e-09!169;UBERON:0000925!5.10e-09!169;UBERON:0006595!5.10e-09!169;UBERON:0002530!1.23e-08!59;UBERON:0005177!1.87e-08!107;UBERON:0005911!1.89e-08!82;UBERON:0000481!1.75e-07!347;UBERON:0001301!1.83e-07!1;UBERON:0002135!3.01e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.12e-20;17!UBERON:0002108;2.39e-19;4!UBERON:0005409;9.11e-16;22!UBERON:0002423;4.69e-15;25!UBERON:0002107;3.54e-14;19!UBERON:0006925;3.54e-14;19!UBERON:0001301;1.55e-11;1!UBERON:0004921;5.61e-10;33!UBERON:0001007;4.01e-09;81!UBERON:0002365;1.22e-08;31!UBERON:0002330;1.22e-08;31!UBERON:0005172;2.12e-08;52!UBERON:0005173;2.12e-08;52!UBERON:0002368;1.58e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-20,17;UBERON:0002108,2.32e-19,4;UBERON:0009497,4.75e-15,25;UBERON:0000015,4.75e-15,25;UBERON:0002423,4.75e-15,25;UBERON:0006235,4.75e-15,25;UBERON:0004161,4.75e-15,25;UBERON:0005172,9.01e-15,54;UBERON:0005173,9.01e-15,54;UBERON:0002107,3.54e-14,19;UBERON:0006925,3.54e-14,19;UBERON:0008836,3.54e-14,19;UBERON:0005409,6.49e-14,25;UBERON:0002417,3.52e-13,60;UBERON:0000916,3.52e-13,60;UBERON:0008835,3.13e-12,22;UBERON:0003894,3.13e-12,22;UBERON:0009854,1.08e-11,23;UBERON:0001301,1.47e-11,1;UBERON:0007499,9.50e-11,25;UBERON:0009856,2.49e-10,26;UBERON:0004921,3.99e-09,118;UBERON:0003929,5.35e-09,54;UBERON:0002365,1.22e-08,31;UBERON:0002330,1.22e-08,31;UBERON:0001007,1.38e-08,145;UBERON:0001555,1.38e-08,145;UBERON:0007026,1.38e-08,145;UBERON:0002368,1.24e-07,35;UBERON:0004119,1.29e-07,160;UBERON:0000925,1.29e-07,160;UBERON:0006595,1.29e-07,160;UBERON:0005177,2.39e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7020744677662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,179.992149447,131.698847034802,102.206653855883,0,2.21379189377604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9477354809648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1949567996322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,38.2207680401111,18.4115604353843,0,0,0,0,0,0,0,0,0,0,0,0,0,72.1036989696166,45.0523422301552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47610117026079,13.7692523117493,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AGXT2 | |||
}} |
Revision as of 05:01, 22 January 2014
Short description: | p1@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -7bp_to_ENST00000510428_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | E9PDL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.76e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.07e-20 | 17 |
small intestine | 2.32e-19 | 4 |
epithelium of foregut-midgut junction | 4.75e-15 | 25 |
anatomical boundary | 4.75e-15 | 25 |
hepatobiliary system | 4.75e-15 | 25 |
foregut-midgut junction | 4.75e-15 | 25 |
septum transversum | 4.75e-15 | 25 |
abdomen element | 9.01e-15 | 54 |
abdominal segment element | 9.01e-15 | 54 |
liver | 3.54e-14 | 19 |
digestive gland | 3.54e-14 | 19 |
liver bud | 3.54e-14 | 19 |
gastrointestinal system | 6.49e-14 | 25 |
abdominal segment of trunk | 3.52e-13 | 60 |
abdomen | 3.52e-13 | 60 |
hepatic diverticulum | 3.13e-12 | 22 |
liver primordium | 3.13e-12 | 22 |
digestive tract diverticulum | 1.08e-11 | 23 |
epididymis | 1.47e-11 | 1 |
epithelial sac | 9.50e-11 | 25 |
sac | 2.49e-10 | 26 |
subdivision of digestive tract | 3.99e-09 | 118 |
gut epithelium | 5.35e-09 | 54 |
exocrine gland | 1.22e-08 | 31 |
exocrine system | 1.22e-08 | 31 |
digestive system | 1.38e-08 | 145 |
digestive tract | 1.38e-08 | 145 |
primitive gut | 1.38e-08 | 145 |
endocrine gland | 1.24e-07 | 35 |
endoderm-derived structure | 1.29e-07 | 160 |
endoderm | 1.29e-07 | 160 |
presumptive endoderm | 1.29e-07 | 160 |
trunk region element | 2.39e-07 | 101 |