FFCP PHASE1:Mm9::chr1:179671150..179671165,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:179671150..179671165,+|id=chr1:179671150..179671165,+|ontology_enrichment_celltype=CL:0000239!2.39e-12!6;CL:0000677!2.39e-12!6;CL:0000212!2.39e-12!6;CL:0000584!2.39e-12!6;CL:0000075!1.90e-10!7;CL:0002076!1.10e-09!15;CL:0000066!1.25e-09!25;CL:0002563!6.49e-08!9;CL:0002251!6.49e-08!9;CL:0000473!1.77e-07!3;CL:0000627!1.77e-07!3;CL:0000682!1.77e-07!3;CL:0000223!8.89e-07!20;CL:0000068!9.89e-07!3;CL:0002202!9.89e-07!3;CL:0000069!9.89e-07!3;CL:0002632!9.89e-07!3;CL:0002368!9.89e-07!3;CL:0000307!9.89e-07!3;CL:0000377!9.89e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.47e-19,6;CL:0000677,1.47e-19,6;CL:0000584,1.47e-19,6;CL:0000066,4.23e-17,25;CL:0000075,1.10e-16,7;CL:0002076,2.55e-16,15;CL:0002563,7.61e-13,9;CL:0002251,7.61e-13,9;CL:0000223,7.33e-12,20;CL:0000682,1.93e-11,3;CL:0000068,3.37e-10,3;CL:0002202,3.37e-10,3;CL:0000069,3.37e-10,3;CL:0002632,3.37e-10,3;CL:0002368,3.37e-10,3;CL:0000307,3.37e-10,3;CL:0000377,3.37e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.71e-19!43;UBERON:0000344!1.71e-17!15;UBERON:0001242!6.52e-14!13;UBERON:0000060!6.52e-14!13;UBERON:0001262!6.52e-14!13;UBERON:0004786!6.52e-14!13;UBERON:0005409!3.59e-13!59;UBERON:0004923!8.62e-10!24;UBERON:0003350!6.49e-08!9;UBERON:0004808!6.49e-08!9;UBERON:0001277!6.49e-08!9;UBERON:0003126!9.89e-07!3;UBERON:0001005!9.89e-07!3;UBERON:0007196!9.89e-07!3;UBERON:0001558!9.89e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-33,31;UBERON:0000344,1.17e-24,15;UBERON:0005409,8.69e-21,47;UBERON:0001242,6.87e-19,13;UBERON:0001262,6.87e-19,13;UBERON:0004786,6.87e-19,13;UBERON:0004923,1.24e-14,24;UBERON:0002108,5.48e-13,4;UBERON:0003350,7.61e-13,9;UBERON:0004808,7.61e-13,9;UBERON:0001277,7.61e-13,9;UBERON:0001007,1.47e-11,116;UBERON:0001555,1.47e-11,116;UBERON:0007026,1.47e-11,116;UBERON:0004119,2.77e-11,118;UBERON:0000925,2.77e-11,118;UBERON:0006595,2.77e-11,118;UBERON:0000485,2.13e-10,11;UBERON:0003126,3.37e-10,3;UBERON:0001005,3.37e-10,3;UBERON:0007196,3.37e-10,3;UBERON:0001558,3.37e-10,3;UBERON:0000331,6.01e-10,3;UBERON:0002116,6.01e-10,3;UBERON:0001204,6.01e-10,3;UBERON:0001168,6.01e-10,3;UBERON:0004921,2.47e-09,114;UBERON:0001962,5.86e-08,2;UBERON:0001961,5.86e-08,2;UBERON:0001744,5.86e-08,2|phase1_expression=0,42.9239751396414,57.3299041630815,3.62957053568196,2.00358291978539,8.2260843236826,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1186209484,37.6231220950159,52.2551087344668,52.9837255275662,38.1384081854024,2.47030445293286,1.76421090831952,23.0599731081517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,6.71122227134764,4.81383744402687,4.04419556011827,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,4.7601101999438,0,0,0,0,0,0.380451252225118,5.69434873853414,3.95277491337626,1.00534083520108,0.596869416123452,1.36474860983384,8.98819408654222,4.32276099749388,3.38540164532424,0,0,0,0.203651327845314,0.387904974335251,0.561086559122548,0.758838445491087,0.295220295959204,0.470996183524124,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr1:179671150..179671165,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:179671150..179671165,+ | |||
|description=CAGE_peak_at_chr1:179671150..179671165,+ | |||
|id=chr1:179671150..179671165,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.39e-12!6;CL:0000677!2.39e-12!6;CL:0000212!2.39e-12!6;CL:0000584!2.39e-12!6;CL:0000075!1.90e-10!7;CL:0002076!1.10e-09!15;CL:0000066!1.25e-09!25;CL:0002563!6.49e-08!9;CL:0002251!6.49e-08!9;CL:0000473!1.77e-07!3;CL:0000627!1.77e-07!3;CL:0000682!1.77e-07!3;CL:0000223!8.89e-07!20;CL:0000068!9.89e-07!3;CL:0002202!9.89e-07!3;CL:0000069!9.89e-07!3;CL:0002632!9.89e-07!3;CL:0002368!9.89e-07!3;CL:0000307!9.89e-07!3;CL:0000377!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.47e-19,6;CL:0000677,1.47e-19,6;CL:0000584,1.47e-19,6;CL:0000066,4.23e-17,25;CL:0000075,1.10e-16,7;CL:0002076,2.55e-16,15;CL:0002563,7.61e-13,9;CL:0002251,7.61e-13,9;CL:0000223,7.33e-12,20;CL:0000682,1.93e-11,3;CL:0000068,3.37e-10,3;CL:0002202,3.37e-10,3;CL:0000069,3.37e-10,3;CL:0002632,3.37e-10,3;CL:0002368,3.37e-10,3;CL:0000307,3.37e-10,3;CL:0000377,3.37e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.71e-19!43;UBERON:0000344!1.71e-17!15;UBERON:0001242!6.52e-14!13;UBERON:0000060!6.52e-14!13;UBERON:0001262!6.52e-14!13;UBERON:0004786!6.52e-14!13;UBERON:0005409!3.59e-13!59;UBERON:0004923!8.62e-10!24;UBERON:0003350!6.49e-08!9;UBERON:0004808!6.49e-08!9;UBERON:0001277!6.49e-08!9;UBERON:0003126!9.89e-07!3;UBERON:0001005!9.89e-07!3;UBERON:0007196!9.89e-07!3;UBERON:0001558!9.89e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-33,31;UBERON:0000344,1.17e-24,15;UBERON:0005409,8.69e-21,47;UBERON:0001242,6.87e-19,13;UBERON:0001262,6.87e-19,13;UBERON:0004786,6.87e-19,13;UBERON:0004923,1.24e-14,24;UBERON:0002108,5.48e-13,4;UBERON:0003350,7.61e-13,9;UBERON:0004808,7.61e-13,9;UBERON:0001277,7.61e-13,9;UBERON:0001007,1.47e-11,116;UBERON:0001555,1.47e-11,116;UBERON:0007026,1.47e-11,116;UBERON:0004119,2.77e-11,118;UBERON:0000925,2.77e-11,118;UBERON:0006595,2.77e-11,118;UBERON:0000485,2.13e-10,11;UBERON:0003126,3.37e-10,3;UBERON:0001005,3.37e-10,3;UBERON:0007196,3.37e-10,3;UBERON:0001558,3.37e-10,3;UBERON:0000331,6.01e-10,3;UBERON:0002116,6.01e-10,3;UBERON:0001204,6.01e-10,3;UBERON:0001168,6.01e-10,3;UBERON:0004921,2.47e-09,114;UBERON:0001962,5.86e-08,2;UBERON:0001961,5.86e-08,2;UBERON:0001744,5.86e-08,2 | |||
|phase1_expression=0,42.9239751396414,57.3299041630815,3.62957053568196,2.00358291978539,8.2260843236826,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1186209484,37.6231220950159,52.2551087344668,52.9837255275662,38.1384081854024,2.47030445293286,1.76421090831952,23.0599731081517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,6.71122227134764,4.81383744402687,4.04419556011827,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,4.7601101999438,0,0,0,0,0,0.380451252225118,5.69434873853414,3.95277491337626,1.00534083520108,0.596869416123452,1.36474860983384,8.98819408654222,4.32276099749388,3.38540164532424,0,0,0,0.203651327845314,0.387904974335251,0.561086559122548,0.758838445491087,0.295220295959204,0.470996183524124,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:179671150..179671165,+ | |||
}} |
Latest revision as of 09:13, 5 August 2015
Short description: | p@chr1:179671150..179671165, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:179671150..179671165, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.47e-19 | 6 |
gut absorptive cell | 1.47e-19 | 6 |
enterocyte | 1.47e-19 | 6 |
epithelial cell | 4.23e-17 | 25 |
columnar/cuboidal epithelial cell | 1.10e-16 | 7 |
endo-epithelial cell | 2.55e-16 | 15 |
intestinal epithelial cell | 7.61e-13 | 9 |
epithelial cell of alimentary canal | 7.61e-13 | 9 |
endodermal cell | 7.33e-12 | 20 |
M cell of gut | 1.93e-11 | 3 |
duct epithelial cell | 3.37e-10 | 3 |
epithelial cell of tracheobronchial tree | 3.37e-10 | 3 |
branched duct epithelial cell | 3.37e-10 | 3 |
epithelial cell of lower respiratory tract | 3.37e-10 | 3 |
respiratory epithelial cell | 3.37e-10 | 3 |
tracheal epithelial cell | 3.37e-10 | 3 |
tracheoblast | 3.37e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.83e-33 | 31 |
mucosa | 1.17e-24 | 15 |
gastrointestinal system | 8.69e-21 | 47 |
intestinal mucosa | 6.87e-19 | 13 |
wall of intestine | 6.87e-19 | 13 |
gastrointestinal system mucosa | 6.87e-19 | 13 |
organ component layer | 1.24e-14 | 24 |
small intestine | 5.48e-13 | 4 |
epithelium of mucosa | 7.61e-13 | 9 |
gastrointestinal system epithelium | 7.61e-13 | 9 |
intestinal epithelium | 7.61e-13 | 9 |
digestive system | 1.47e-11 | 116 |
digestive tract | 1.47e-11 | 116 |
primitive gut | 1.47e-11 | 116 |
endoderm-derived structure | 2.77e-11 | 118 |
endoderm | 2.77e-11 | 118 |
presumptive endoderm | 2.77e-11 | 118 |
simple columnar epithelium | 2.13e-10 | 11 |
trachea | 3.37e-10 | 3 |
respiratory airway | 3.37e-10 | 3 |
tracheobronchial tree | 3.37e-10 | 3 |
lower respiratory tract | 3.37e-10 | 3 |
ileal mucosa | 6.01e-10 | 3 |
ileum | 6.01e-10 | 3 |
mucosa of small intestine | 6.01e-10 | 3 |
wall of small intestine | 6.01e-10 | 3 |
subdivision of digestive tract | 2.47e-09 | 114 |
gut-associated lymphoid tissue | 5.86e-08 | 2 |
mucosa-associated lymphoid tissue | 5.86e-08 | 2 |
lymphoid tissue | 5.86e-08 | 2 |