FFCP PHASE1:Mm9::chr2:119625461..119625496,+: Difference between revisions
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{{FFCP|EntrezGene=22174|HGNC=|UniProt=P55144|association_with_transcript=211bp_to_ENSMUST00000028763,NM_019392,uc008luq.1_5end|description=CAGE_peak_2_at_Tyro3_5end|id=chr2:119625461..119625496,+|ontology_enrichment_celltype=CL:0000221!3.07e-07!44;CL:0000133!3.07e-07!44;CL:0002319!5.07e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44;CL:0002319,3.80e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.49e-18!73;UBERON:0005743!6.49e-18!73;UBERON:0000073!4.94e-17!75;UBERON:0001016!4.94e-17!75;UBERON:0004121!5.63e-16!102;UBERON:0000924!5.63e-16!102;UBERON:0006601!5.63e-16!102;UBERON:0000955!8.69e-12!50;UBERON:0006238!8.69e-12!50;UBERON:0001049!8.76e-12!52;UBERON:0005068!8.76e-12!52;UBERON:0006241!8.76e-12!52;UBERON:0007135!8.76e-12!52;UBERON:0000033!8.90e-12!63;UBERON:0002346!1.70e-11!71;UBERON:0003075!1.70e-11!71;UBERON:0007284!1.70e-11!71;UBERON:0002616!2.02e-11!49;UBERON:0000468!3.32e-09!333;UBERON:0002020!2.56e-08!34;UBERON:0003056!3.48e-08!49;UBERON:0003080!3.52e-08!40;UBERON:0002780!5.40e-08!39;UBERON:0001890!5.40e-08!39;UBERON:0006240!5.40e-08!39;UBERON:0000922!6.84e-08!328;UBERON:0002791!1.71e-07!29;UBERON:0003528!1.71e-07!29;UBERON:0001893!1.71e-07!29;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000991!6.71e-07!18;UBERON:0005564!6.71e-07!18;UBERON:0002619!8.32e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-18,73;UBERON:0001016,1.54e-17,75;UBERON:0004121,2.51e-17,95;UBERON:0000924,2.51e-17,95;UBERON:0006601,2.51e-17,95;UBERON:0010371,2.61e-14,73;UBERON:0002346,4.13e-13,64;UBERON:0003075,4.13e-13,64;UBERON:0007284,4.13e-13,64;UBERON:0000073,9.72e-13,54;UBERON:0001049,3.67e-12,52;UBERON:0005068,3.67e-12,52;UBERON:0006241,3.67e-12,52;UBERON:0007135,3.67e-12,52;UBERON:0000955,3.08e-11,47;UBERON:0006238,3.08e-11,47;UBERON:0002616,7.21e-11,46;UBERON:0002020,1.80e-08,34;UBERON:0003080,1.84e-08,40;UBERON:0003056,2.01e-08,49;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0010314,4.21e-08,92;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29;UBERON:0002021,1.39e-07,10;UBERON:0000411,1.39e-07,10;UBERON:0001950,1.39e-07,10;UBERON:0000991,5.43e-07,18;UBERON:0005564,5.43e-07,18;UBERON:0002619,6.30e-07,17|phase1_expression=5.92550734287738,0,0.454999239389536,0.90739263392049,0.500895729946347,0.671517087647559,0.700837921786577,2.84071311571468,0.140788722151667,0.234064526321993,0.34243593645101,0.478632953972018,1.54080656938085,2.27293046289393,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,3.57181818634493,1.48936426801328,0.783599367416806,0.639969691173627,0.45881856213434,1.14846392823004,0.86152399231815,0.430942465371778,1.33016393619462,0.756090389279792,0.221730510655305,0,0,0,1.73310971850765,3.49092755252834,2.45003227514843,0,0,0,0,0,0,0.881277725829041,1.52065396829272,1.83546752161682,4.69434806608824,6.5407546914134,3.51497892375155,3.4997381833371,2.79972843250725,8.62515386189829,0,0.725362142011344,0.336093799142464,1.80081605225163,2.29226751951005,2.06268836910977,3.64169629547276,1.5869729378161,2.53532561402472,2.03306719241479,0,0,0,0.7104801149461,3.29560121570245,4.99483796918021,2.28117147078651,2.29510095163874,2.10324961351382,7.14127461009509,5.30084498283872,3.42974237801871,3.35459148563827,1.83843757322004,6.60695285996332,4.59674417106676,4.45458946443106,2.90149833006426,2.01272815925301,3.12548022334056,6.70039197603314,3.93933827022176,5.04234217663473,4.12480019663135,2.56269025438385,2.98239113320481,1.28734528666413,1.43585964202892,0.579728977403356,1.72084775396277,0,0,0,0,1.12355536105401,1.36344258062446,1.03914401841148,1.06001872353102,4.50698943285378,1.28326477414318,2.54805239706646,0,2.81438353314578,3.29367825117628,1.51657333504435,0.91347103775248,0,0.29688427812965,2.60227990149204,2.74018930480927,2.7673859670727,2.11011696773672,3.29248379979973,0.879666139307728,0.988779870937496,0.144599356919912,0,2.26473589926373,0.220841518460394,0.969750506270444,0,10.5401086924157,15.7085030110091,1.53274233125155,0,0,0,4.04434726393021,6.40500843946077,3.8952849154988,9.38651329038293,12.0186264945255,5.40248915854856,6.81413304884582,5.19380755636613,0.373220911830279,0.252722758433675,0.420883711772948,3.25301107406759,5.28774840196988,3.78130472591233,2.86339153887859,2.85753296435577,3.45907044769094,4.2165776051878,1.81092359517311,11.2095356325078,6.61871280587367,7.2139960907219,9.42541649438572,6.39508673218875,5.92028683087683,3.90986059175093,6.76716507182877,0,0,0,2.48550927042602,1.64168241986767,3.06105504483725,1.89395788468168,2.16440654922144,2.00547246753592,2.32533944750408,1.60964040839772,1.05088808130453,2.13927804887525,0.985004784474571,0.56748166682099,0.877199924551994,1.09775057645525,0.536825675041487,9.67333763394985,1.85228302282712,1.65209391491899,0.793351699990633,5.54549451391608,4.87697010906921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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22174 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P55144 | |||
|association_with_transcript=211bp_to_ENSMUST00000028763,NM_019392,uc008luq.1_5end | |||
|cluster_id=chr2:119625461..119625496,+ | |||
|description=CAGE_peak_2_at_Tyro3_5end | |||
|id=chr2:119625461..119625496,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.07e-07!44;CL:0000133!3.07e-07!44;CL:0002319!5.07e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44;CL:0002319,3.80e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.49e-18!73;UBERON:0005743!6.49e-18!73;UBERON:0000073!4.94e-17!75;UBERON:0001016!4.94e-17!75;UBERON:0004121!5.63e-16!102;UBERON:0000924!5.63e-16!102;UBERON:0006601!5.63e-16!102;UBERON:0000955!8.69e-12!50;UBERON:0006238!8.69e-12!50;UBERON:0001049!8.76e-12!52;UBERON:0005068!8.76e-12!52;UBERON:0006241!8.76e-12!52;UBERON:0007135!8.76e-12!52;UBERON:0000033!8.90e-12!63;UBERON:0002346!1.70e-11!71;UBERON:0003075!1.70e-11!71;UBERON:0007284!1.70e-11!71;UBERON:0002616!2.02e-11!49;UBERON:0000468!3.32e-09!333;UBERON:0002020!2.56e-08!34;UBERON:0003056!3.48e-08!49;UBERON:0003080!3.52e-08!40;UBERON:0002780!5.40e-08!39;UBERON:0001890!5.40e-08!39;UBERON:0006240!5.40e-08!39;UBERON:0000922!6.84e-08!328;UBERON:0002791!1.71e-07!29;UBERON:0003528!1.71e-07!29;UBERON:0001893!1.71e-07!29;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000991!6.71e-07!18;UBERON:0005564!6.71e-07!18;UBERON:0002619!8.32e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-18,73;UBERON:0001016,1.54e-17,75;UBERON:0004121,2.51e-17,95;UBERON:0000924,2.51e-17,95;UBERON:0006601,2.51e-17,95;UBERON:0010371,2.61e-14,73;UBERON:0002346,4.13e-13,64;UBERON:0003075,4.13e-13,64;UBERON:0007284,4.13e-13,64;UBERON:0000073,9.72e-13,54;UBERON:0001049,3.67e-12,52;UBERON:0005068,3.67e-12,52;UBERON:0006241,3.67e-12,52;UBERON:0007135,3.67e-12,52;UBERON:0000955,3.08e-11,47;UBERON:0006238,3.08e-11,47;UBERON:0002616,7.21e-11,46;UBERON:0002020,1.80e-08,34;UBERON:0003080,1.84e-08,40;UBERON:0003056,2.01e-08,49;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0010314,4.21e-08,92;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29;UBERON:0002021,1.39e-07,10;UBERON:0000411,1.39e-07,10;UBERON:0001950,1.39e-07,10;UBERON:0000991,5.43e-07,18;UBERON:0005564,5.43e-07,18;UBERON:0002619,6.30e-07,17 | |||
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| |||
|short_description=p2@Tyro3 | |||
}} |
Revision as of 20:50, 3 August 2015
Short description: | p2@Tyro3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tyro3_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENSMUST00000028763, NM_019392, uc008luq.1_5end |
EntrezGene: | 22174 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data