FFCP PHASE1:Hg19::chr7:45954407..45954428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45954407..45954428,+ | |||
|id=chr7:45954407..45954428,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.99e-11!180;CL:0000153!7.05e-11!9;CL:0000447!7.05e-11!9;CL:0000057!3.69e-09!75;CL:0000667!6.64e-09!6;CL:0000058!6.64e-09!6;CL:0000138!6.64e-09!6;CL:0000327!3.00e-08!14;CL:0002334!7.80e-08!12;CL:0000499!8.32e-08!27;CL:0002620!9.16e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.15e-25;9!CL:0000447;1.15e-25;9!CL:0000138;5.79e-18;6!CL:0000327;3.42e-15;15!CL:0000499;1.42e-13;28!CL:0000214;2.05e-09;3!CL:0000135;3.12e-09;3!CL:0000388;3.12e-09;3!CL:0000511;2.10e-07;1!CL:0002625;2.10e-07;1!CL:0000216;2.10e-07;1!CL:0002616;2.10e-07;1!CL:0002620;6.16e-07;23!CL:0000151;9.84e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.13e-25,9;CL:0000447,1.13e-25,9;CL:0000058,6.18e-18,6;CL:0000138,6.18e-18,6;CL:0000327,3.39e-15,15;CL:0000499,1.27e-13,28;CL:0000214,1.89e-09,3;CL:0000135,2.43e-09,3;CL:0000388,2.43e-09,3;CL:0000151,5.84e-08,36;CL:0002616,1.58e-07,1;CL:0000511,1.80e-07,1;CL:0002625,1.80e-07,1;CL:0000216,1.80e-07,1;CL:0002620,6.00e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.11e-07;1!DOID:4235;2.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.22e-07,1;DOID:4235,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.39e-07!6;UBERON:0002358!1.39e-07!6;UBERON:0003684!1.39e-07!6;UBERON:0001178!1.39e-07!6;UBERON:0005631!5.71e-07!14;UBERON:0000158!5.71e-07!14;UBERON:0004457!6.59e-07!12;UBERON:0000042!6.59e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.05e-09;3!UBERON:0007616;2.05e-09;3!UBERON:0002217;2.05e-09;3!UBERON:0002018;2.05e-09;3!UBERON:0007846;3.12e-09;3!UBERON:0000043;3.12e-09;3!UBERON:0007845;3.12e-09;3!UBERON:0001136;2.10e-07;1!UBERON:0001343;2.10e-07;1!UBERON:0004910;2.10e-07;1!UBERON:0004813;2.10e-07;1!UBERON:0004457;6.57e-07;9!UBERON:0000042;6.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.89e-09,3;UBERON:0007616,1.89e-09,3;UBERON:0002217,1.89e-09,3;UBERON:0002018,1.89e-09,3;UBERON:0007846,2.43e-09,3;UBERON:0000043,2.43e-09,3;UBERON:0007845,2.43e-09,3;UBERON:0001136,1.80e-07,1;UBERON:0001343,1.80e-07,1;UBERON:0004910,1.80e-07,1;UBERON:0005154,1.80e-07,1;UBERON:0005295,1.80e-07,1;UBERON:0004813,1.80e-07,1;UBERON:0005297,1.80e-07,1;UBERON:0005294,1.80e-07,1;UBERON:0010141,1.80e-07,1;UBERON:0005891,1.80e-07,1;UBERON:0004871,2.20e-07,8 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,3.00219895059391,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,25.6621798193042,5.51471701699479,8.25625158076695,0.795285947051099,6.8128881842369,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,3.58779271377724,0,0.211931901159562,7.50227740211006,0.206105058476878,3.34932702059318,0.744467425326359,0,0,6.81571190459109,0.736399189138395,0.161646056818812,8.52023022039874,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0,0.581051892299796,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0.55597265731176,1.43124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0,0,0,0,5.97095077717098,4.38450885253763,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,2.53329162357197,2.63435914367922,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,1.39866726707491,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,1.03018711554838,0,0,0,0,0,0.226705925512272,0,0,2.50724377514082,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,1.94334832096759,1.9110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,2.77305377178851,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr7:45954407..45954428,+ | |||
}} |
Revision as of 16:55, 22 January 2014
Short description: | p@chr7:45954407..45954428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45954407..45954428, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.13e-25 | 9 |
carbohydrate secreting cell | 1.13e-25 | 9 |
chondroblast | 6.18e-18 | 6 |
chondrocyte | 6.18e-18 | 6 |
extracellular matrix secreting cell | 3.39e-15 | 15 |
stromal cell | 1.27e-13 | 28 |
synovial cell | 1.89e-09 | 3 |
fibrocyte | 2.43e-09 | 3 |
tendon cell | 2.43e-09 | 3 |
secretory cell | 5.84e-08 | 36 |
perirenal adipocyte cell | 1.58e-07 | 1 |
androgen binding protein secreting cell | 1.80e-07 | 1 |
seminiferous tubule epithelial cell | 1.80e-07 | 1 |
Sertoli cell | 1.80e-07 | 1 |
skin fibroblast | 6.00e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.89e-09 | 3 |
layer of synovial tissue | 1.89e-09 | 3 |
synovial joint | 1.89e-09 | 3 |
synovial membrane of synovial joint | 1.89e-09 | 3 |
dense regular connective tissue | 2.43e-09 | 3 |
tendon | 2.43e-09 | 3 |
regular connective tissue | 2.43e-09 | 3 |
mesothelium | 1.80e-07 | 1 |
seminiferous tubule of testis | 1.80e-07 | 1 |
epithelium of male gonad | 1.80e-07 | 1 |
epithelial cord | 1.80e-07 | 1 |
sex cord | 1.80e-07 | 1 |
seminiferous tubule epithelium | 1.80e-07 | 1 |
testis sex cord | 1.80e-07 | 1 |
genital ridge | 1.80e-07 | 1 |
primitive sex cord of indifferent gonad | 1.80e-07 | 1 |
coelomic epithelium | 1.80e-07 | 1 |
somatic layer of lateral plate mesoderm | 2.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.22e-07 | 1 |
spindle cell sarcoma | 3.17e-07 | 1 |